Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007323 Daucus carota HOM05D006041 ORTHO05D007473 1.4e-265 919.1 478 100.0
Oeu016281.1 Olea europaea HOM05D006041 ORTHO05D007473 5.0e-154 548.5 483 60.9
Lj6A740T67 Lonicera japonica HOM05D006041 ORTHO05D007473 8.6e-154 547.7 478 61.3
Dinv26256 Davidia involucrata HOM05D006041 ORTHO05D007473 1.9e-153 546.6 485 61.9
Rhsim09G0037900 Rhododendron simsii HOM05D006041 ORTHO05D007473 4.7e-152 542.0 512 59.2
Nitab4.5_0009602g0010 Nicotiana tabacum HOM05D006041 ORTHO05D007473 1.8e-151 540.0 468 61.5
Nitab4.5_0000238g0060 Nicotiana tabacum HOM05D006041 ORTHO05D007473 1.5e-150 537.0 468 61.5
Haze_10912 Corylus avellana HOM05D006041 ORTHO05D007473 2.2e-149 533.1 486 60.1
Cfa015002 Carpinus fangiana HOM05D006041 ORTHO05D007473 8.3e-149 531.2 486 59.5
Cc11_g08020 Coffea canephora HOM05D006041 ORTHO05D007473 4.1e-148 528.9 482 60.2
Cpa.g.c27573.2 Carica papaya HOM05D006041 ORTHO05D007473 5.4e-148 528.5 492 60.2
CSS0021041 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 1.6e-147 526.9 497 59.2
CSS0021655 Camellia sinensis var. sinensis HOM05D006041 ORTHO05D007473 1.6e-147 526.9 497 59.2
Manes.15G133200 Manihot esculenta HOM05D006041 ORTHO05D007473 1.6e-147 526.9 480 60.6
SalBow2G0340 Salvia bowleyana HOM05D006041 ORTHO05D007473 2.1e-147 526.6 475 60.8
vmacro00556 Vaccinium macrocarpon HOM05D006041 ORTHO05D007473 3.5e-147 525.8 485 59.8
Solyc01g005430.3 Solanum lycopersicum HOM05D006041 ORTHO05D007473 4.6e-147 525.4 475 60.8
TWI74G1002 Tripterygium wilfordii HOM05D006041 ORTHO05D007473 5.1e-146 521.9 491 59.5
Haze_10913 Corylus avellana HOM05D006041 ORTHO05D007473 4.3e-145 518.8 512 57.0
PGSC0003DMG400032118 Solanum tuberosum HOM05D006041 ORTHO05D007473 1.6e-144 516.9 476 61.1
HanXRQChr08g0212441 Helianthus annuus HOM05D006041 ORTHO05D007473 2.1e-144 516.5 479 60.3
Nn4g24305 Nelumbo nucifera HOM05D006041 ORTHO05D007473 6.2e-144 515.0 484 59.7
MD13G1029800 Malus domestica HOM05D006041 ORTHO05D007473 1.1e-143 514.2 505 57.2
Lsat_1_v5_gn_8_45641 Lactuca sativa HOM05D006041 ORTHO05D007473 6.8e-143 511.5 480 59.8
Sopen01g001440 Solanum pennellii HOM05D006041 ORTHO05D007473 1.5e-142 510.4 475 59.4
Gorai.005G158800 Gossypium raimondii HOM05D006041 ORTHO05D007473 5.8e-142 508.4 486 57.8
AL5G10750 Arabidopsis lyrata HOM05D006041 ORTHO05D007473 7.6e-142 508.1 477 58.5
MD16G1020600 Malus domestica HOM05D006041 ORTHO05D007473 7.6e-142 508.1 504 56.0
COL.COLO4_16567 Corchorus olitorius HOM05D006041 ORTHO05D007473 1.3e-141 507.3 486 58.4
RcHm_v2.0_Chr4g0443331 Rosa chinensis HOM05D006041 ORTHO05D007473 1.3e-141 507.3 487 57.7
AUR62003915 Chenopodium quinoa HOM05D006041 ORTHO05D007473 2.9e-141 506.1 495 56.2
Thecc.02G290600 Theobroma cacao HOM05D006041 ORTHO05D007473 3.7e-141 505.8 489 58.7
Migut.E00465 Erythranthe guttata HOM05D006041 ORTHO05D007473 6.4e-141 505.0 482 57.9
Lalb_Chr05g0222281 Lupinus albus HOM05D006041 ORTHO05D007473 6.4e-141 505.0 487 57.3
Carub.0005s0060 Capsella rubella HOM05D006041 ORTHO05D007473 1.1e-140 504.2 483 58.0
MSTRG.2140 Avicennia marina HOM05D006041 ORTHO05D007473 5.4e-140 501.9 492 56.9
Eucgr.G02114 Eucalyptus grandis HOM05D006041 ORTHO05D007473 7.1e-140 501.5 483 57.6
AT2G01650 Arabidopsis thaliana HOM05D006041 ORTHO05D007473 1.2e-139 500.7 472 58.1
Peaxi162Scf00655g00023 Petunia axillaris HOM05D006041 ORTHO05D007473 3.5e-139 499.2 446 61.7
CAN.G1130.10 Capsicum annuum HOM05D006041 ORTHO05D007473 6.0e-139 498.4 513 56.5
Ciclev10015068m.g Citrus clementina HOM05D006041 ORTHO05D007473 6.0e-139 498.4 486 55.1
TAR629G0174 Trochodendron aralioides HOM05D006041 ORTHO05D007473 6.0e-139 498.4 484 59.1
Thhalv10004151m.g Eutrema salsugineum HOM05D006041 ORTHO05D007473 1.3e-138 497.3 474 58.0
Duzib251G0740 Durio zibethinus HOM05D006041 ORTHO05D007473 1.7e-138 496.9 485 57.5
Medtr8g104930 Medicago truncatula HOM05D006041 ORTHO05D007473 8.6e-138 494.6 484 56.8
Phvul.002G319700 Phaseolus vulgaris HOM05D006041 ORTHO05D007473 8.6e-138 494.6 487 58.1
Prupe.1G331600 Prunus persica HOM05D006041 ORTHO05D007473 1.1e-137 494.2 488 56.8
MBI19_g21093_MAGBIO Magnolia biondii HOM05D006041 ORTHO05D007473 3.3e-137 492.7 486 56.4
PGR142G4228 Punica granatum HOM05D006041 ORTHO05D007473 7.3e-137 491.5 483 56.5
VMungo0251G2799 Vigna mungo HOM05D006041 ORTHO05D007473 1.2e-136 490.7 489 57.1
CsaV3_5G028000 Cucumis sativus L. HOM05D006041 ORTHO05D007473 2.8e-136 489.6 481 56.8
Sabra08G0102300 Salix brachista HOM05D006041 ORTHO05D007473 2.8e-136 489.6 488 57.6
Duzib268G1057 Durio zibethinus HOM05D006041 ORTHO05D007473 3.6e-136 489.2 491 57.0
SGA_v2.0_scaffold139G35400 Striga asiatica HOM05D006041 ORTHO05D007473 6.2e-136 488.4 489 56.0
Aa31LG2G8250 Aethionema arabicum HOM05D006041 ORTHO05D007473 8.1e-136 488.0 489 55.6
THA.LOC104805081 Tarenaya hassleriana HOM05D006041 ORTHO05D007473 1.1e-135 487.6 490 56.7
CARHR144220 Cardamine hirsuta HOM05D006041 ORTHO05D007473 1.4e-135 487.3 471 57.1
BolC7t43765H Brassica oleracea HOM05D006041 ORTHO05D007473 5.2e-135 485.3 475 57.9
BcaC06g31287 Brassica carinata HOM05D006041 ORTHO05D007473 6.8e-135 485.0 471 57.1
C07p32270 Brassica napus HOM05D006041 ORTHO05D007473 8.9e-135 484.6 475 57.7
BcaC06g34139 Brassica carinata HOM05D006041 ORTHO05D007473 1.2e-134 484.2 475 57.7
MELO3C005281.2 Cucumis melo HOM05D006041 ORTHO05D007473 2.6e-134 483.0 488 55.5
EL10Ac6g15713 Beta vulgaris HOM05D006041 ORTHO05D007473 3.4e-134 482.6 513 53.2
Lj4g0006027 Lotus japonicus HOM05D006041 ORTHO05D007473 4.4e-134 482.3 482 55.6
Atru.chr11.510 Acer truncatum HOM05D006041 ORTHO05D007473 7.6e-134 481.5 485 55.5
ECA233G3443 Erigeron canadensis HOM05D006041 ORTHO05D007473 1.7e-133 480.3 469 59.1
Glyma.08G042900 Glycine max HOM05D006041 ORTHO05D007473 1.7e-133 480.3 484 54.8
Ah.03g145700 Amaranthus hybridus HOM05D006041 ORTHO05D007473 3.8e-133 479.2 495 53.9
BraA06t27296Z Brassica rapa HOM05D006041 ORTHO05D007473 4.9e-133 478.8 472 56.4
A06p44210 Brassica napus HOM05D006041 ORTHO05D007473 1.9e-132 476.9 471 56.7
Sp2g13100 Schrenkiella parvula HOM05D006041 ORTHO05D007473 1.2e-131 474.2 481 55.3
TAR371G0590 Trochodendron aralioides HOM05D006041 ORTHO05D007473 2.7e-131 473.0 494 56.9
Ca_17289_v3 Cicer arietinum L. HOM05D006041 ORTHO05D007473 3.5e-131 472.6 485 54.4
Psat7g009240 Pisum sativum HOM05D006041 ORTHO05D007473 4.6e-131 472.2 484 55.4
FvH4_4g33820 Fragaria vesca HOM05D006041 ORTHO05D007473 1.3e-130 470.7 489 53.6
Sc03g0001760 Simmondsia chinensis HOM05D006041 ORTHO05D007473 1.3e-130 470.7 503 53.1
Gohir.A01G147900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 6.6e-130 468.4 478 56.1
arahy.Tifrunner.gnm1.ann1.BAL5EB Arachis hypogaea HOM05D006041 ORTHO05D007473 1.9e-129 466.8 480 53.3
Glyma.05G235400 Glycine max HOM05D006041 ORTHO05D007473 5.6e-129 465.3 485 53.8
arahy.Tifrunner.gnm1.ann1.IVEQ23 Arachis hypogaea HOM05D006041 ORTHO05D007473 1.1e-127 461.1 477 53.7
CANSAT01G0691 Cannabis sativa HOM05D006041 ORTHO05D007473 2.4e-127 459.9 486 55.3
Gorai.002G173400 Gossypium raimondii HOM05D006041 ORTHO05D007473 4.0e-127 459.1 478 54.8
Gohir.D01G141100 Gossypium hirsutum HOM05D006041 ORTHO05D007473 5.3e-127 458.8 478 54.6
TPR.G32714 Trifolium pratense HOM05D006041 ORTHO05D007473 4.4e-126 455.7 382 62.0
FAN12G3784 Fragaria x ananassa HOM05D006041 ORTHO05D007473 7.6e-126 454.9 497 52.3
ClCG01G006460 Citrullus lanatus HOM05D006041 ORTHO05D007473 1.3e-125 454.1 486 54.3
FAN17G0347 Fragaria x ananassa HOM05D006041 ORTHO05D007473 4.2e-124 449.1 496 51.8
FAN22G1094 Fragaria x ananassa HOM05D006041 ORTHO05D007473 5.4e-124 448.7 504 51.2
Manes.17G082400 Manihot esculenta HOM05D006041 ORTHO05D007473 2.7e-123 446.4 468 54.1
unitig_27.g25310 Utricularia gibba HOM05D006041 ORTHO05D007473 6.6e-122 441.8 487 52.2
ATR0753G012 Amborella trichopoda HOM05D006041 ORTHO05D007473 3.1e-119 433.0 485 50.3
PSO478G4621 Papaver somniferum HOM05D006041 ORTHO05D007473 4.5e-118 429.1 488 51.6
Sed0015632 Sechium edule HOM05D006041 ORTHO05D007473 1.3e-117 427.6 375 60.5
PSO017G0247 Papaver somniferum HOM05D006041 ORTHO05D007473 3.8e-117 426.0 485 51.3
CiPaw.05G190300 Carya illinoinensis HOM05D006041 ORTHO05D007473 6.7e-114 415.2 402 57.2
CDE07G0862 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 2.1e-112 410.2 480 51.7
Dinv18641 Davidia involucrata HOM05D006041 ORTHO05D007473 4.5e-110 402.5 427 54.1
AUR62038228 Chenopodium quinoa HOM05D006041 ORTHO05D007473 7.6e-110 401.7 476 49.2
QL03p034952 Quercus lobata HOM05D006041 ORTHO05D007473 2.5e-105 386.7 431 52.2
Potri.008G133700 Populus trichocarpa HOM05D006041 ORTHO05D007473 2.1e-104 383.6 413 54.7
Gohir.D02G141500 Gossypium hirsutum HOM05D006041 ORTHO05D007473 5.3e-103 379.0 411 52.8
Gohir.A03G117900 Gossypium hirsutum HOM05D006041 ORTHO05D007473 1.7e-101 374.0 411 52.1
Sed0013468 Sechium edule HOM05D006041 ORTHO05D007473 1.8e-90 337.4 302 58.9
SGA_v2.0_scaffold151G36726 Striga asiatica HOM05D006041 ORTHO05D007473 5.1e-90 335.9 389 50.6
Aqoxy3G00037 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 2.6e-89 333.6 510 43.1
Zm00001eb099250 Zea mays HOM05D006041 ORTHO05D007473 2.0e-81 307.4 478 40.4
SEGI_21307 Sequoiadendron giganteum HOM05D006041 ORTHO05D007473 5.0e-77 292.7 392 46.9
Zm00001eb312180 Zea mays HOM05D006041 ORTHO05D007473 5.0e-77 292.7 477 39.4
Hma1.2p1_0089F.1_g045430 Hydrangea macrophylla HOM05D006041 ORTHO05D007473 1.5e-76 291.2 313 53.0
GSVIVG01011678001 Vitis vinifera HOM05D006041 ORTHO05D007473 9.4e-76 288.5 197 75.6
Oeu063578.1 Olea europaea HOM05D006041 ORTHO05D007473 9.7e-73 278.5 306 51.6
CDE06G1197 Ceratophyllum demersum HOM05D006041 ORTHO05D007473 5.9e-70 269.2 480 41.5
SGA_v2.0_scaffold151G36757 Striga asiatica HOM05D006041 ORTHO05D007473 1.8e-63 247.7 228 60.5
Actinidia34032 Actinidia chinensis HOM05D006041 ORTHO05D007473 5.4e-63 246.1 316 49.7
Aa31LG3G2990 Aethionema arabicum HOM05D006041 ORTHO05D007473 2.6e-57 227.3 233 53.6
HPP92_009644 Vanilla planifolia HOM05D006041 ORTHO05D007473 9.2e-55 218.8 205 56.6
Os09g0401600 Oryza sativa ssp. japonica HOM05D006041 ORTHO05D007473 5.9e-54 216.1 226 51.3
CBR_g3474 Chara braunii HOM05D006041 ORTHO05D007473 3.3e-52 210.3 323 39.0
Mapoly0081s0058 Marchantia polymorpha HOM05D006041 ORTHO05D007473 4.7e-43 179.9 495 30.7
SGA_v2.0_scaffold151G36758 Striga asiatica HOM05D006041 ORTHO05D007473 1.0e-42 178.7 247 42.9
Lalb_Chr16g0387681 Lupinus albus HOM05D006041 ORTHO05D007473 1.9e-39 167.9 328 38.4
Aa31sc215G20 Aethionema arabicum HOM05D006041 ORTHO05D007473 1.5e-33 148.3 112 66.1
arahy.Tifrunner.gnm1.ann1.I8TFGP Arachis hypogaea HOM05D006041 ORTHO05D007473 5.4e-31 139.8 155 47.7
Psat7g181280 Pisum sativum HOM05D006041 ORTHO05D007473 5.6e-28 129.8 138 51.4
CAN.G3.6 Capsicum annuum HOM05D006041 ORTHO05D007473 6.2e-27 126.3 185 42.7
QL10p059701 Quercus lobata HOM05D006041 ORTHO05D007473 1.3e-24 118.6 179 43.6
Actinidia25876 Actinidia chinensis HOM05D001822 ORTHO05D001744 6.6e-21 106.3 109 54.1
SMO276G0024 Selaginella moellendorffii HOM05D006041 ORTHO05D007473 4.3e-20 103.6 94 53.2
MCO04G546 Micromonas commoda HOM05D006041 ORTHO05D007473 1.4e-18 98.6 239 30.1
Actinidia34031 Actinidia chinensis HOM05D006041 ORTHO05D007473 1.9e-15 88.2 74 62.2
RcHm_v2.0_Chr2g0174181 Rosa chinensis HOM05D004631 ORTHO05D005223 6.4e-08 63.2 114 33.3
Ciclev10016175m.g Citrus clementina HOM05D004631 ORTHO05D005223 1.1e-07 62.4 141 31.2
FAN02G2863 Fragaria x ananassa HOM05D004631 ORTHO05D005223 3.2e-07 60.8 141 29.1
Duzib147G1024 Durio zibethinus HOM05D004631 ORTHO05D005223 4.2e-07 60.5 114 33.3
CSS0005098 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 5.4e-07 60.1 89 34.8
CSS0019664 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 5.4e-07 60.1 89 34.8
Cc07_g00410 Coffea canephora HOM05D004631 ORTHO05D005223 5.4e-07 60.1 112 34.8
FvH4_6g52650 Fragaria vesca HOM05D004631 ORTHO05D005223 5.4e-07 60.1 141 29.1
Aqoxy4G01147 Aquilegia oxysepala HOM05D006041 ORTHO05D007473 9.3e-07 59.3 57 61.4
Ah.11g049900 Amaranthus hybridus HOM05D000470 ORTHO05D000348 1.2e-06 58.9 160 30.0
Manes.15G156400 Manihot esculenta HOM05D004631 ORTHO05D005223 1.2e-06 58.9 118 33.1
Actinidia35792 Actinidia chinensis HOM05D004631 ORTHO05D005223 1.6e-06 58.5 121 31.4
MSTRG.24067 Avicennia marina HOM05D004631 ORTHO05D005223 1.6e-06 58.5 147 29.9
CANSAT64G0886 Cannabis sativa HOM05D004631 ORTHO05D005223 1.6e-06 58.5 119 31.9
ECA246G0472 Erigeron canadensis HOM05D004631 ORTHO05D005223 1.6e-06 58.5 90 34.4
Eucgr.I01692 Eucalyptus grandis HOM05D004631 ORTHO05D005223 2.1e-06 58.2 153 31.4
HanXRQChr17g0549531 Helianthus annuus HOM05D004631 ORTHO05D005223 2.1e-06 58.2 114 34.2
Potri.009G059300 Populus trichocarpa HOM05D004631 ORTHO05D005223 2.1e-06 58.2 169 28.4
Atru.chr6.2487 Acer truncatum HOM05D004631 ORTHO05D005223 2.7e-06 57.8 103 33.0
Mapoly0078s0021 Marchantia polymorpha HOM05D004631 ORTHO05D005223 2.7e-06 57.8 89 36.0
COL.COLO4_29276 Corchorus olitorius HOM05D004631 ORTHO05D005223 3.5e-06 57.4 91 37.4
HPP92_028037 Vanilla planifolia HOM05D004631 ORTHO05D005223 3.5e-06 57.4 91 35.2
CSS0019474 Camellia sinensis var. sinensis HOM05D004631 ORTHO05D005223 4.6e-06 57.0 89 34.8
Gorai.011G093000 Gossypium raimondii HOM05D004631 ORTHO05D005223 4.6e-06 57.0 115 33.9
Medtr6g022770 Medicago truncatula HOM05D004631 ORTHO05D005223 4.6e-06 57.0 147 27.9
Rhsim08G0046200 Rhododendron simsii HOM05D004631 ORTHO05D005223 4.6e-06 57.0 88 35.2
Sabra09G0043700 Salix brachista HOM05D004631 ORTHO05D005223 4.6e-06 57.0 145 30.3
Sc03g0007030 Simmondsia chinensis HOM05D004631 ORTHO05D005223 4.6e-06 57.0 90 36.7
Solyc02g093820.4 Solanum lycopersicum HOM05D004631 ORTHO05D005223 4.6e-06 57.0 139 30.9
PGSC0003DMG400020270 Solanum tuberosum HOM05D004631 ORTHO05D005223 4.6e-06 57.0 151 27.8
Thecc.04G027600 Theobroma cacao HOM05D004631 ORTHO05D005223 4.6e-06 57.0 109 32.1
CAN.G1333.12 Capsicum annuum HOM05D002747 ORTHO05D003069 6.0e-06 56.6 98 31.6
CAN.G473.59 Capsicum annuum HOM05D004631 ORTHO05D005223 6.0e-06 56.6 100 34.0
Gohir.D10G085100 Gossypium hirsutum HOM05D004631 ORTHO05D005223 6.0e-06 56.6 91 37.4
SalBow1G3920 Salvia bowleyana HOM05D004631 ORTHO05D005223 6.0e-06 56.6 96 31.2
Cfa007277 Carpinus fangiana HOM05D004631 ORTHO05D005223 7.9e-06 56.2 151 29.1
AUR62032242 Chenopodium quinoa HOM05D004631 ORTHO05D005223 7.9e-06 56.2 162 29.0
Migut.H00060 Erythranthe guttata HOM05D004631 ORTHO05D005223 7.9e-06 56.2 114 31.6
Gohir.A10G160500 Gossypium hirsutum HOM05D004631 ORTHO05D005223 7.9e-06 56.2 91 37.4
MBI05_g32279_MAGBIO Magnolia biondii HOM05D004631 ORTHO05D005223 7.9e-06 56.2 89 34.8
MD17G1018100 Malus domestica HOM05D004631 ORTHO05D005223 7.9e-06 56.2 147 27.2
RhsimUnG0241300 Rhododendron simsii HOM05D004631 ORTHO05D005223 7.9e-06 56.2 134 30.6


User provided reference genes

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