Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 1.3e-216 756.1 385 100.0
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 1.9e-172 609.4 383 79.1
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 1.4e-170 603.2 379 78.4
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 2.4e-170 602.4 383 77.0
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 2.4e-170 602.4 383 77.0
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 9.0e-170 600.5 381 78.5
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 2.2e-168 595.9 379 77.8
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 2.9e-168 595.5 381 77.7
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 4.9e-168 594.7 384 76.8
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.4e-167 593.2 384 76.8
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 7.1e-167 590.9 384 76.0
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 9.3e-167 590.5 384 76.0
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 3.5e-166 588.6 376 78.7
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 8.7e-165 583.9 381 76.1
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 2.5e-164 582.4 377 76.7
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 4.3e-164 581.6 385 74.8
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 5.7e-164 581.3 384 75.0
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 5.7e-164 581.3 384 75.5
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 1.3e-163 580.1 384 75.8
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 1.6e-163 579.7 378 75.7
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 2.8e-163 578.9 383 74.4
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 3.7e-163 578.6 384 75.0
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 6.3e-163 577.8 381 73.5
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 8.2e-163 577.4 380 74.7
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 1.8e-162 576.2 383 73.9
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 1.8e-162 576.2 381 74.5
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 6.9e-162 574.3 384 73.2
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 6.9e-162 574.3 383 74.7
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 9.0e-162 573.9 379 74.9
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 1.2e-161 573.5 381 74.0
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 1.2e-161 573.5 381 73.2
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 1.2e-161 573.5 384 74.0
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 1.2e-161 573.5 379 74.7
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 1.5e-161 573.2 397 71.8
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 4.5e-161 571.6 377 74.0
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 5.9e-161 571.2 385 72.7
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 7.6e-161 570.9 383 73.6
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 1.0e-160 570.5 387 73.1
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.0e-160 570.5 384 73.4
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 1.7e-160 569.7 381 74.8
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 3.8e-160 568.5 384 71.4
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 1.4e-159 566.6 384 73.7
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 1.9e-159 566.2 385 73.2
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 4.2e-159 565.1 384 75.5
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 2.1e-158 562.8 383 71.5
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 2.7e-158 562.4 384 70.8
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 4.6e-158 561.6 391 71.9
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 7.9e-158 560.8 379 72.8
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 7.9e-158 560.8 391 71.9
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 7.9e-158 560.8 384 72.9
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 1.8e-157 559.7 385 71.2
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 2.3e-157 559.3 386 72.5
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 3.0e-157 558.9 384 72.1
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 3.0e-157 558.9 383 71.8
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 6.7e-157 557.8 381 73.0
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 1.1e-156 557.0 383 73.4
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 2.5e-156 555.8 392 71.4
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 3.3e-156 555.4 380 71.6
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 4.3e-156 555.1 381 71.4
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 7.4e-156 554.3 393 71.8
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 2.2e-155 552.7 384 71.1
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 6.3e-155 551.2 381 71.7
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 4.1e-154 548.5 381 68.8
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 6.9e-154 547.7 382 69.9
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 2.0e-153 546.2 381 74.5
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 2.6e-153 545.8 375 68.5
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 2.6e-153 545.8 379 69.9
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 5.9e-153 544.7 381 68.5
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 7.7e-153 544.3 381 71.1
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 5.0e-152 541.6 380 69.7
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 5.0e-152 541.6 380 69.7
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 5.5e-151 538.1 376 68.9
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 9.4e-151 537.3 382 69.1
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 3.6e-150 535.4 382 68.6
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 4.6e-150 535.0 382 68.3
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 6.1e-150 534.6 378 68.5
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 1.4e-149 533.5 516 57.0
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 2.6e-148 529.3 380 68.2
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 7.4e-148 527.7 385 67.0
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 2.2e-147 526.2 381 66.7
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 4.8e-147 525.0 385 67.5
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 6.3e-147 524.6 379 68.6
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 1.8e-146 523.1 429 64.6
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 4.1e-146 521.9 356 71.1
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 1.5e-145 520.0 384 68.0
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 3.4e-145 518.8 344 75.9
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 1.2e-142 510.4 383 65.5
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 7.9e-142 507.7 382 66.2
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 6.7e-141 504.6 379 63.6
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.1e-140 503.8 350 73.1
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 8.2e-139 497.7 380 65.0
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 1.8e-138 496.5 380 66.8
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 4.1e-138 495.4 310 79.0
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 1.6e-137 493.4 385 64.9
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 2.6e-137 492.7 380 64.2
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 5.9e-137 491.5 384 66.1
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 5.9e-129 464.9 308 75.3
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.3e-128 463.8 289 78.5
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 2.5e-127 459.5 332 71.7
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.3e-125 453.0 289 76.8
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 5.4e-122 441.8 305 72.8
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 2.3e-117 426.4 384 60.4
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 7.5e-116 421.4 382 54.7
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 4.9e-115 418.7 307 71.0
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.4e-114 417.2 381 53.5
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 4.3e-111 405.6 379 59.1
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 1.4e-109 400.6 264 72.7
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 2.4e-106 389.8 405 50.4
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 5.4e-106 388.7 383 52.0
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 4.7e-102 375.6 381 51.7
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 2.3e-101 373.2 241 75.5
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 1.5e-100 370.5 266 67.7
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 9.5e-95 351.3 272 64.0
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 1.9e-87 327.0 236 72.0
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 2.4e-66 256.9 148 81.1
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 7.1e-66 255.4 240 56.2
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 1.7e-59 234.2 425 36.5
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 1.6e-57 227.6 398 35.4
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 2.7e-57 226.9 420 35.2
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 1.5e-52 211.1 147 74.8
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 6.7e-48 195.7 157 64.3
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 5.5e-42 176.0 114 76.3
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 5.9e-36 156.0 107 66.4
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 6.7e-32 142.5 184 43.5
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 2.6e-23 114.0 66 81.8
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 2.4e-21 107.5 147 48.3
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 2.6e-20 104.0 180 38.3
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 5.5e-18 96.3 149 40.3
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 1.0e-16 92.0 88 58.0
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 1.5e-15 88.2 68 64.7
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 1.2e-12 78.6 110 42.7
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 1.2e-12 78.6 70 52.9
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 1.3e-11 75.1 69 53.6
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 6.5e-11 72.8 36 94.4
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 3.2e-10 70.5 90 41.1
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 8.0e-09 65.9 36 86.1
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 1.7e-06 58.2 55 47.3


User provided reference genes

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