Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007247 Daucus carota HOM05D004123 ORTHO05D004768 6.8e-76 287.7 203 100.0
Nitab4.5_0003373g0030 Nicotiana tabacum HOM05D004123 ORTHO05D004768 2.1e-16 90.1 185 41.6
HanXRQChr09g0252701 Helianthus annuus HOM05D004123 ORTHO05D004768 2.3e-15 86.7 156 39.7
HanXRQChr08g0213911 Helianthus annuus HOM05D004123 ORTHO05D004768 4.3e-14 82.4 146 38.4
Lsat_1_v5_gn_8_40481 Lactuca sativa HOM05D004123 ORTHO05D004768 9.7e-14 81.3 157 37.6
Nitab4.5_0000791g0080 Nicotiana tabacum HOM05D004123 ORTHO05D004768 9.1e-12 74.7 161 39.1
DCAR_026735 Daucus carota HOM05D004123 ORTHO05D004768 5.9e-11 72.0 225 32.9
Oeu043592.1 Olea europaea HOM05D004123 ORTHO05D004768 7.7e-11 71.6 160 41.2
Sopen05g005180 Solanum pennellii HOM05D004123 ORTHO05D004768 1.3e-10 70.9 178 46.1
Rhsim09G0107600 Rhododendron simsii HOM05D004123 ORTHO05D004768 2.2e-10 70.1 154 40.3
vmacro10561 Vaccinium macrocarpon HOM05D004123 ORTHO05D004768 2.2e-10 70.1 152 35.5
Lsat_1_v5_gn_3_59041 Lactuca sativa HOM05D004123 ORTHO05D004768 5.0e-10 68.9 155 36.8
Solyc05g009380.4 Solanum lycopersicum HOM05D004123 ORTHO05D004768 5.0e-10 68.9 245 36.3
Dinv31634 Davidia involucrata HOM05D004123 ORTHO05D004768 8.5e-10 68.2 152 41.4
Gohir.A04G098200 Gossypium hirsutum HOM05D004123 ORTHO05D004768 2.5e-09 66.6 155 37.4
Medtr1g110710 Medicago truncatula HOM05D004123 ORTHO05D004768 2.5e-09 66.6 155 36.8
Potri.010G124200 Populus trichocarpa HOM05D004123 ORTHO05D004768 2.5e-09 66.6 145 33.1
Sed0009095 Sechium edule HOM05D004123 ORTHO05D004768 2.5e-09 66.6 156 33.3
Ciclev10018307m.g Citrus clementina HOM05D004123 ORTHO05D004768 4.2e-09 65.9 153 37.9
Potri.008G121200 Populus trichocarpa HOM05D004123 ORTHO05D004768 5.5e-09 65.5 152 36.2
MSTRG.844 Avicennia marina HOM05D004123 ORTHO05D004768 9.4e-09 64.7 168 38.1
Sed0004295 Sechium edule HOM05D004123 ORTHO05D004768 9.4e-09 64.7 142 43.7
Actinidia14896 Actinidia chinensis HOM05D004123 ORTHO05D004768 1.2e-08 64.3 163 36.2
Gohir.D04G137875 Gossypium hirsutum HOM05D004123 ORTHO05D004768 1.2e-08 64.3 155 36.8
Gorai.012G122600 Gossypium raimondii HOM05D004123 ORTHO05D004768 1.2e-08 64.3 155 36.8
TWI31G0276 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 1.2e-08 64.3 162 34.6
CAN.G610.78 Capsicum annuum HOM05D004123 ORTHO05D004768 1.6e-08 63.9 178 44.4
CiPaw.16G065300 Carya illinoinensis HOM05D004123 ORTHO05D004768 2.1e-08 63.5 159 41.5
Nn3g17856 Nelumbo nucifera HOM05D004123 ORTHO05D004768 2.1e-08 63.5 153 43.8
Duzib251G0145 Durio zibethinus HOM05D004123 ORTHO05D004768 2.7e-08 63.2 152 36.2
Cfa018590 Carpinus fangiana HOM05D004123 ORTHO05D004768 3.6e-08 62.8 144 34.7
CDE12G0443 Ceratophyllum demersum HOM05D004123 ORTHO05D004768 3.6e-08 62.8 147 31.3
Eucgr.G02316 Eucalyptus grandis HOM05D004123 ORTHO05D004768 3.6e-08 62.8 160 43.1
CiPaw.15G085900 Carya illinoinensis HOM05D004123 ORTHO05D004768 6.1e-08 62.0 151 35.8
Duzib268G1624 Durio zibethinus HOM05D004123 ORTHO05D004768 7.9e-08 61.6 151 33.1
TAR622G0492 Trochodendron aralioides HOM05D004123 ORTHO05D004768 7.9e-08 61.6 146 37.7
FvH4_4g27300 Fragaria vesca HOM05D004123 ORTHO05D004768 1.0e-07 61.2 175 34.9
FAN07G2244 Fragaria x ananassa HOM05D004123 ORTHO05D004768 1.0e-07 61.2 175 34.3
Lj6C757T7 Lonicera japonica HOM05D004123 ORTHO05D004768 1.0e-07 61.2 159 37.7
CSS0040364 Camellia sinensis var. sinensis HOM05D004123 ORTHO05D004768 1.4e-07 60.8 143 45.5
Haze_17490 Corylus avellana HOM05D004123 ORTHO05D004768 1.4e-07 60.8 146 34.9
Duzib248G0829 Durio zibethinus HOM05D004123 ORTHO05D004768 1.4e-07 60.8 161 32.3
Migut.L01390 Erythranthe guttata HOM05D004123 ORTHO05D004768 1.8e-07 60.5 160 49.4
TPR.G18823 Trifolium pratense HOM05D004123 ORTHO05D004768 1.8e-07 60.5 163 35.6
VMungo0720G2589 Vigna mungo HOM05D004123 ORTHO05D004768 1.8e-07 60.5 214 29.0
CsaV3_5G023110 Cucumis sativus L. HOM05D004123 ORTHO05D004768 2.3e-07 60.1 164 34.8
FAN12G0145 Fragaria x ananassa HOM05D004123 ORTHO05D004768 3.0e-07 59.7 175 34.3
FAN12G0921 Fragaria x ananassa HOM05D004123 ORTHO05D004768 3.0e-07 59.7 175 34.3
Gohir.A03G147300 Gossypium hirsutum HOM05D004123 ORTHO05D004768 3.0e-07 59.7 153 38.6
Manes.06G067400 Manihot esculenta HOM05D004123 ORTHO05D004768 3.0e-07 59.7 149 32.9
Psat6g227440 Pisum sativum HOM05D004123 ORTHO05D004768 3.9e-07 59.3 156 35.9
Thecc.02G229500 Theobroma cacao HOM05D004123 ORTHO05D004768 3.9e-07 59.3 152 34.9
MSTRG.13535 Avicennia marina HOM05D004123 ORTHO05D004768 8.8e-07 58.2 160 38.1
Gorai.005G191500 Gossypium raimondii HOM05D004123 ORTHO05D004768 8.8e-07 58.2 153 37.9
Peaxi162Scf00382g00826 Petunia axillaris HOM05D004123 ORTHO05D004768 8.8e-07 58.2 47 66.0
SalBow8G0756 Salvia bowleyana HOM05D004123 ORTHO05D004768 8.8e-07 58.2 146 42.5
TWI75G1885 Tripterygium wilfordii HOM05D004123 ORTHO05D004768 1.1e-06 57.8 143 34.3
TAR374G0469 Trochodendron aralioides HOM05D004123 ORTHO05D004768 1.1e-06 57.8 147 29.9
MELO3C003021.2 Cucumis melo HOM05D004123 ORTHO05D004768 1.5e-06 57.4 164 34.1
Gohir.D02G170500 Gossypium hirsutum HOM05D004123 ORTHO05D004768 1.5e-06 57.4 156 35.9
RcHm_v2.0_Chr4g0435091 Rosa chinensis HOM05D004123 ORTHO05D004768 1.5e-06 57.4 184 29.9
Aqoxy3G00286 Aquilegia oxysepala HOM05D004123 ORTHO05D004768 3.3e-06 56.2 170 32.9
Ca_03055_v3 Cicer arietinum L. HOM05D004123 ORTHO05D004768 3.3e-06 56.2 155 41.3
Lj2g0014688 Lotus japonicus HOM05D004123 ORTHO05D004768 3.3e-06 56.2 153 32.7
QL01p041642 Quercus lobata HOM05D004123 ORTHO05D004768 3.3e-06 56.2 167 37.7
arahy.Tifrunner.gnm1.ann1.1XFG43 Arachis hypogaea HOM05D004123 ORTHO05D004768 7.4e-06 55.1 171 33.3
Dinv21080 Davidia involucrata HOM05D004123 ORTHO05D004768 7.4e-06 55.1 179 36.9
ECA233G4891 Erigeron canadensis HOM05D004123 ORTHO05D004768 9.7e-06 54.7 44 68.2
Sabra08G0091900 Salix brachista HOM05D004123 ORTHO05D004768 9.7e-06 54.7 147 30.6


User provided reference genes

Program Settings