Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007237 Daucus carota HOM05D006290 ORTHO05D007734 3.2e-60 235.0 122 100.0
Dinv21105 Davidia involucrata HOM05D001580 ORTHO05D001517 2.8e-24 115.5 97 62.9
Oeu033294.1 Olea europaea HOM05D006290 ORTHO05D007734 8.1e-24 114.0 124 51.6
Hma1.2p1_3293F.1_g334960 Hydrangea macrophylla HOM05D006290 ORTHO05D007734 6.9e-23 110.9 118 51.7
Manes.14G100600 Manihot esculenta HOM05D006290 ORTHO05D007734 2.6e-22 109.0 108 54.6
ECA234G1725 Erigeron canadensis HOM05D006290 ORTHO05D007734 4.9e-21 104.8 125 47.2
Atru.chr11.1291 Acer truncatum HOM05D006290 ORTHO05D007734 6.4e-21 104.4 103 57.3
QL01p043858 Quercus lobata HOM05D006290 ORTHO05D007734 6.4e-21 104.4 120 51.7
Nitab4.5_0001914g0020 Nicotiana tabacum HOM05D006290 ORTHO05D007734 8.4e-21 104.0 104 51.9
Duzib251G0521 Durio zibethinus HOM05D006290 ORTHO05D007734 1.4e-20 103.2 118 50.8
Sabra10G0096300 Salix brachista HOM05D006290 ORTHO05D007734 4.2e-20 101.7 104 52.9
MSTRG.826 Avicennia marina HOM05D006290 ORTHO05D007734 5.4e-20 101.3 96 55.2
DCAR_023668 Daucus carota HOM05D000325 ORTHO05D002981 1.6e-19 99.8 86 64.0
Potri.010G126800 Populus trichocarpa HOM05D006290 ORTHO05D007734 2.1e-19 99.4 106 51.9
HanXRQChr16g0529651 Helianthus annuus HOM05D006290 ORTHO05D007734 2.7e-19 99.0 119 48.7
Peaxi162Scf00004g01813 Petunia axillaris HOM05D006290 ORTHO05D007734 2.7e-19 99.0 115 45.2
Gorai.008G184100 Gossypium raimondii HOM05D006290 ORTHO05D007734 4.6e-19 98.2 120 45.8
Lsat_1_v5_gn_4_18480 Lactuca sativa HOM05D006290 ORTHO05D007734 6.0e-19 97.8 129 50.4
Thecc.02G357300 Theobroma cacao HOM05D006290 ORTHO05D007734 1.3e-18 96.7 106 52.8
HanXRQChr17g0567961 Helianthus annuus HOM05D006290 ORTHO05D007734 1.7e-18 96.3 114 47.4
GSVIVG01011914001 Vitis vinifera HOM05D006290 ORTHO05D007734 1.7e-18 96.3 99 50.5
COL.COLO4_07905 Corchorus olitorius HOM05D001580 ORTHO05D001517 3.9e-18 95.1 127 48.8
CiPaw.15G083600 Carya illinoinensis HOM05D006290 ORTHO05D007734 5.1e-18 94.7 107 53.3
Gohir.A13G054000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 5.1e-18 94.7 104 52.9
Gohir.D13G071500 Gossypium hirsutum HOM05D006290 ORTHO05D007734 5.1e-18 94.7 104 52.9
Gorai.013G081900 Gossypium raimondii HOM05D006290 ORTHO05D007734 5.1e-18 94.7 104 52.9
Cfa018610 Carpinus fangiana HOM05D006290 ORTHO05D007734 8.7e-18 94.0 116 49.1
Potri.008G119300 Populus trichocarpa HOM05D006290 ORTHO05D007734 8.7e-18 94.0 105 51.4
Gohir.D12G171600 Gossypium hirsutum HOM05D006290 ORTHO05D007734 1.1e-17 93.6 120 45.8
CANSAT64G2445 Cannabis sativa HOM05D006290 ORTHO05D007734 1.9e-17 92.8 93 53.8
Oeu020586.1 Olea europaea HOM05D006290 ORTHO05D007734 1.9e-17 92.8 103 50.5
SGA_v2.0_scaffold124G33547 Striga asiatica HOM05D006290 ORTHO05D007734 2.5e-17 92.4 94 56.4
MSTRG.13517 Avicennia marina HOM05D006290 ORTHO05D007734 3.3e-17 92.0 90 54.4
Haze_17464 Corylus avellana HOM05D006290 ORTHO05D007734 3.3e-17 92.0 116 48.3
Migut.L01076 Erythranthe guttata HOM05D006290 ORTHO05D007734 4.3e-17 91.7 97 56.7
Gohir.A12G168000 Gossypium hirsutum HOM05D006290 ORTHO05D007734 4.3e-17 91.7 120 45.8
MD13G1043600 Malus domestica HOM05D006290 ORTHO05D007734 7.3e-17 90.9 98 50.0
TWI79G1749 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 7.3e-17 90.9 117 46.2
Nitab4.5_0003285g0030 Nicotiana tabacum HOM05D006290 ORTHO05D007734 1.3e-16 90.1 129 42.6
Actinidia16641 Actinidia chinensis HOM05D006290 ORTHO05D007734 1.6e-16 89.7 76 64.5
vmacro10549 Vaccinium macrocarpon HOM05D006290 ORTHO05D007734 2.1e-16 89.4 89 58.4
PGR119G1521 Punica granatum HOM05D006290 ORTHO05D007734 2.8e-16 89.0 94 55.3
FvH4_4g27620 Fragaria vesca HOM05D006290 ORTHO05D007734 3.6e-16 88.6 94 53.2
TWI75G0318 Tripterygium wilfordii HOM05D006290 ORTHO05D007734 4.8e-16 88.2 118 43.2
Medtr5g055200 Medicago truncatula HOM05D006290 ORTHO05D007734 5.3e-15 84.7 116 43.1
HanXRQChr15g0477181 Helianthus annuus HOM05D006290 ORTHO05D007734 1.5e-14 83.2 96 50.0
Hund05756 Selenicereus undatus HOM05D006290 ORTHO05D007734 2.0e-14 82.8 94 47.9
TPR.G26319 Trifolium pratense HOM05D006290 ORTHO05D007734 2.6e-14 82.4 115 47.0
A07p31920 Brassica napus HOM05D006290 ORTHO05D007734 3.4e-14 82.0 121 45.5
Duzib268G1644 Durio zibethinus HOM05D006290 ORTHO05D007734 3.4e-14 82.0 118 44.1
THA.LOC104821947 Tarenaya hassleriana HOM05D006290 ORTHO05D007734 3.4e-14 82.0 104 51.9
BcaB05g24400 Brassica carinata HOM05D006290 ORTHO05D007734 4.5e-14 81.6 88 52.3
C06p37490 Brassica napus HOM05D006290 ORTHO05D007734 4.5e-14 81.6 121 45.5
BolC6t38851H Brassica oleracea HOM05D006290 ORTHO05D007734 4.5e-14 81.6 121 45.5
BraA07t30820Z Brassica rapa HOM05D006290 ORTHO05D007734 4.5e-14 81.6 121 45.5
Eucgr.G02333 Eucalyptus grandis HOM05D006290 ORTHO05D007734 4.5e-14 81.6 107 46.7
BolC2t08586H Brassica oleracea HOM05D006290 ORTHO05D007734 5.8e-14 81.3 88 51.1
arahy.Tifrunner.gnm1.ann1.89WS3K Arachis hypogaea HOM05D006290 ORTHO05D007734 1.3e-13 80.1 95 46.3
C02p25020 Brassica napus HOM05D006290 ORTHO05D007734 1.3e-13 80.1 88 51.1
arahy.Tifrunner.gnm1.ann1.N6V5UD Arachis hypogaea HOM05D006290 ORTHO05D007734 2.2e-13 79.3 95 46.3
Lj2g0005219 Lotus japonicus HOM05D006290 ORTHO05D007734 2.2e-13 79.3 93 47.3
TAR371G1266 Trochodendron aralioides HOM05D006108 ORTHO05D007605 2.2e-13 79.3 92 51.1
Sc14g0007550 Simmondsia chinensis HOM05D006290 ORTHO05D007734 2.9e-13 79.0 93 48.4
BcaC08g45955 Brassica carinata HOM05D006290 ORTHO05D007734 3.8e-13 78.6 121 46.3
Medtr1g111150 Medicago truncatula HOM05D006290 ORTHO05D007734 3.8e-13 78.6 95 47.4
TPR.G38332 Trifolium pratense HOM05D006290 ORTHO05D007734 3.8e-13 78.6 88 50.0
Rhsim09G0109500 Rhododendron simsii HOM05D006290 ORTHO05D007734 4.9e-13 78.2 63 61.9
Solyc05g150121.1 Solanum lycopersicum HOM05D006290 ORTHO05D007734 4.9e-13 78.2 94 48.9
A02p15210 Brassica napus HOM05D006290 ORTHO05D007734 6.4e-13 77.8 60 65.0
BraA02t06584Z Brassica rapa HOM05D006290 ORTHO05D007734 6.4e-13 77.8 60 65.0
Glyma.10G275300 Glycine max HOM05D006290 ORTHO05D007734 8.4e-13 77.4 109 45.0
AL2G27490 Arabidopsis lyrata HOM05D006290 ORTHO05D007734 1.1e-12 77.0 116 47.4
EL10Ac6g14437 Beta vulgaris HOM05D006290 ORTHO05D007734 1.1e-12 77.0 95 49.5
HanXRQChr17g0552191 Helianthus annuus HOM05D006290 ORTHO05D007734 1.1e-12 77.0 91 49.5
BcaC03g14971 Brassica carinata HOM05D006290 ORTHO05D007734 1.4e-12 76.6 88 51.1
FAN12G1280 Fragaria x ananassa HOM05D006290 ORTHO05D007734 1.4e-12 76.6 118 41.5
Manes.06G069950 Manihot esculenta HOM05D006290 ORTHO05D007734 1.4e-12 76.6 83 55.4
Glyma.20G114400 Glycine max HOM05D006290 ORTHO05D007734 2.4e-12 75.9 93 49.5
Dinv04481 Davidia involucrata HOM05D001580 ORTHO05D001517 3.2e-12 75.5 61 62.3
Nn4g23807 Nelumbo nucifera HOM05D006290 ORTHO05D007734 3.2e-12 75.5 74 52.7
FAN07G1587 Fragaria x ananassa HOM05D006108 ORTHO05D007605 7.1e-12 74.3 125 40.8
Lalb_Chr17g0342051 Lupinus albus HOM05D006290 ORTHO05D007734 7.1e-12 74.3 92 44.6
unitig_26.g10264 Utricularia gibba HOM05D000483 ORTHO05D000158 7.1e-12 74.3 58 58.6
Ca_11183_v3 Cicer arietinum L. HOM05D006290 ORTHO05D007734 9.3e-12 73.9 93 48.4
MBI12_g30235_MAGBIO Magnolia biondii HOM05D006290 ORTHO05D007734 9.3e-12 73.9 73 52.1
Phvul.007G026200 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 9.3e-12 73.9 107 44.9
Aa31sc179G60 Aethionema arabicum HOM05D006290 ORTHO05D007734 1.2e-11 73.6 91 51.6
BcaB03g15431 Brassica carinata HOM05D006290 ORTHO05D007734 1.2e-11 73.6 121 44.6
Lj5g0001389 Lotus japonicus HOM05D006290 ORTHO05D007734 1.2e-11 73.6 101 44.6
Lalb_Chr21g0309011 Lupinus albus HOM05D006290 ORTHO05D007734 1.2e-11 73.6 93 48.4
RcHm_v2.0_Chr4g0435471 Rosa chinensis HOM05D006108 ORTHO05D007605 1.2e-11 73.6 86 47.7
AT1G68585 Arabidopsis thaliana HOM05D006290 ORTHO05D007734 1.6e-11 73.2 88 53.4
Carub.0002s1512 Capsella rubella HOM05D006290 ORTHO05D007734 1.6e-11 73.2 115 47.0
Thhalv10019326m.g Eutrema salsugineum HOM05D006290 ORTHO05D007734 1.6e-11 73.2 116 44.0
Phvul.003G034800 Phaseolus vulgaris HOM05D006290 ORTHO05D007734 2.1e-11 72.8 94 45.7
CsaV3_5G034200 Cucumis sativus L. HOM05D006290 ORTHO05D007734 2.7e-11 72.4 92 48.9
ECA246G4651 Erigeron canadensis HOM05D006290 ORTHO05D007734 2.7e-11 72.4 87 43.7
FAN22G0059 Fragaria x ananassa HOM05D006108 ORTHO05D007605 2.7e-11 72.4 125 40.0
Glyma.01G082500 Glycine max HOM05D006290 ORTHO05D007734 2.7e-11 72.4 93 46.2
CARHR061380 Cardamine hirsuta HOM05D006290 ORTHO05D007734 6.0e-11 71.2 60 65.0
Sp5g23690 Schrenkiella parvula HOM05D006290 ORTHO05D007734 6.0e-11 71.2 88 51.1
Glyma.08G263700 Glycine max HOM05D006290 ORTHO05D007734 1.0e-10 70.5 93 45.2
Ciclev10033212m.g Citrus clementina HOM05D006290 ORTHO05D007734 1.3e-10 70.1 83 49.4
Psat6g229000 Pisum sativum HOM05D006290 ORTHO05D007734 1.3e-10 70.1 95 46.3
ClCG05G022830 Citrullus lanatus HOM05D006290 ORTHO05D007734 3.9e-10 68.6 92 47.8
Sed0010442 Sechium edule HOM05D006290 ORTHO05D007734 5.1e-10 68.2 113 42.5
Duzib248G0641 Durio zibethinus HOM05D006108 ORTHO05D007605 1.5e-09 66.6 74 52.7
AUR62002889 Chenopodium quinoa HOM05D006290 ORTHO05D007734 9.6e-09 63.9 63 52.4
MELO3C012234.2 Cucumis melo HOM05D006290 ORTHO05D007734 8.1e-08 60.8 41 65.9
SalBow8G3983 Salvia bowleyana HOM05D006290 ORTHO05D007734 1.4e-07 60.1 45 66.7
GSVIVG01008271001 Vitis vinifera HOM05D006108 ORTHO05D007605 1.8e-07 59.7 80 45.0
Aqoxy3G00325 Aquilegia oxysepala HOM05D006290 ORTHO05D007734 2.4e-07 59.3 117 36.8
VMungo0720G2407 Vigna mungo HOM05D006290 ORTHO05D007734 3.1e-07 58.9 59 50.8
Lalb_Chr10g0099941 Lupinus albus HOM05D006290 ORTHO05D007734 6.9e-07 57.8 85 43.5
Actinidia14876 Actinidia chinensis HOM05D006290 ORTHO05D007734 9.0e-07 57.4 73 52.1
Sed0022191 Sechium edule HOM05D006290 ORTHO05D007734 2.0e-06 56.2 79 46.8
CiPaw.16G064000 Carya illinoinensis HOM05D006290 ORTHO05D007734 4.5e-06 55.1 39 69.2


User provided reference genes

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