Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007209 Daucus carota HOM05D004085 ORTHO05D005189 1.5e-186 656.0 316 100.0
Dinv34021 Davidia involucrata HOM05D004085 ORTHO05D005189 6.5e-150 534.3 315 78.1
ECA233G2807 Erigeron canadensis HOM05D004085 ORTHO05D005189 8.0e-148 527.3 315 77.8
Rhsim09G0122200 Rhododendron simsii HOM05D004085 ORTHO05D005189 8.0e-148 527.3 315 77.5
Nitab4.5_0001071g0010 Nicotiana tabacum HOM05D004085 ORTHO05D005189 1.8e-147 526.2 316 76.6
Nn4g23533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 6.7e-147 524.2 315 75.2
Actinidia07768 Actinidia chinensis HOM05D004085 ORTHO05D005189 8.8e-147 523.9 320 76.2
HanXRQChr12g0365061 Helianthus annuus HOM05D004085 ORTHO05D005189 2.2e-145 519.2 315 75.6
Lj3A1027G87 Lonicera japonica HOM05D004085 ORTHO05D005189 6.3e-145 517.7 367 67.6
Manes.05G115200 Manihot esculenta HOM05D004085 ORTHO05D005189 1.1e-144 516.9 315 75.2
vmacro10475 Vaccinium macrocarpon HOM05D004085 ORTHO05D005189 4.1e-144 515.0 315 75.2
GSVIVG01008152001 Vitis vinifera HOM05D004085 ORTHO05D005189 4.1e-144 515.0 315 74.6
Hma1.2p1_0428F.1_g150850 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 5.3e-144 514.6 316 75.3
Gohir.A03G106500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 7.0e-144 514.2 319 74.6
Sopen04g001280 Solanum pennellii HOM05D004085 ORTHO05D005189 7.0e-144 514.2 316 74.4
PGSC0003DMG400001937 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.6e-143 513.1 316 74.4
Atru.chr11.1559 Acer truncatum HOM05D004085 ORTHO05D005189 2.0e-143 512.7 315 74.6
Peaxi162Scf00873g00113 Petunia axillaris HOM05D004085 ORTHO05D005189 2.0e-143 512.7 318 74.2
Nitab4.5_0000591g0050 Nicotiana tabacum HOM05D004085 ORTHO05D005189 4.5e-143 511.5 314 74.8
Ciclev10032152m.g Citrus clementina HOM05D004085 ORTHO05D005189 1.3e-142 510.0 316 74.4
Duzib251G0046 Durio zibethinus HOM05D004085 ORTHO05D005189 1.3e-142 510.0 316 74.4
Gorai.005G147600 Gossypium raimondii HOM05D004085 ORTHO05D005189 1.3e-142 510.0 319 74.3
Cc11_g11560 Coffea canephora HOM05D004085 ORTHO05D005189 2.9e-142 508.8 317 74.8
Gohir.D02G131700 Gossypium hirsutum HOM05D004085 ORTHO05D005189 3.8e-142 508.4 319 74.0
TWI75G0426 Tripterygium wilfordii HOM05D004085 ORTHO05D005189 8.5e-142 507.3 316 74.7
CiPaw.05G122000 Carya illinoinensis HOM05D004085 ORTHO05D005189 1.5e-141 506.5 316 75.0
CsaV3_6G033900 Cucumis sativus L. HOM05D004085 ORTHO05D005189 3.2e-141 505.4 316 74.7
ClCG08G010600 Citrullus lanatus HOM05D004085 ORTHO05D005189 3.6e-140 501.9 316 73.7
Thecc.02G322800 Theobroma cacao HOM05D004085 ORTHO05D005189 3.6e-140 501.9 316 72.5
MD16G1055900 Malus domestica HOM05D004085 ORTHO05D005189 4.7e-140 501.5 321 73.8
Sc14g0007770 Simmondsia chinensis HOM05D004085 ORTHO05D005189 1.0e-139 500.4 316 73.4
PGR102G0161 Punica granatum HOM05D004085 ORTHO05D005189 1.4e-139 500.0 315 73.3
Prupe.1G293400 Prunus persica HOM05D004085 ORTHO05D005189 2.3e-139 499.2 318 73.3
Phvul.003G280600 Phaseolus vulgaris HOM05D004085 ORTHO05D005189 3.0e-139 498.8 316 72.2
Lsat_1_v5_gn_8_36601 Lactuca sativa HOM05D004085 ORTHO05D005189 5.2e-139 498.0 315 74.6
Migut.D01616 Erythranthe guttata HOM05D004085 ORTHO05D005189 8.8e-139 497.3 315 71.7
MELO3C011402.2 Cucumis melo HOM05D004085 ORTHO05D005189 1.5e-138 496.5 316 73.7
MD13G1056600 Malus domestica HOM05D004085 ORTHO05D005189 2.0e-138 496.1 321 73.5
TAR629G1999 Trochodendron aralioides HOM05D004085 ORTHO05D005189 2.6e-138 495.7 316 72.2
Aqoxy3G03746 Aquilegia oxysepala HOM05D004085 ORTHO05D005189 7.5e-138 494.2 316 71.8
Carub.0005s0294 Capsella rubella HOM05D004085 ORTHO05D005189 7.5e-138 494.2 316 72.2
DCAR_011575 Daucus carota HOM05D004085 ORTHO05D005189 1.7e-137 493.0 316 70.9
Ah.03g138610 Amaranthus hybridus HOM05D004085 ORTHO05D005189 3.7e-137 491.9 315 72.4
Lj4g0023791 Lotus japonicus HOM05D004085 ORTHO05D005189 6.3e-137 491.1 316 71.8
PSO063G3410 Papaver somniferum HOM05D004085 ORTHO05D005189 1.8e-136 489.6 316 72.2
CSS0028863 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 2.4e-136 489.2 315 71.7
Medtr8g066120 Medicago truncatula HOM05D004085 ORTHO05D005189 2.4e-136 489.2 316 72.2
Eucgr.J01102 Eucalyptus grandis HOM05D004085 ORTHO05D005189 3.1e-136 488.8 315 71.1
AL5G13590 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 4.1e-136 488.4 316 70.9
Hma1.2p1_0595F.1_g186285 Hydrangea macrophylla HOM05D004085 ORTHO05D005189 7.0e-136 487.6 315 71.1
PSO409G0049 Papaver somniferum HOM05D004085 ORTHO05D005189 7.0e-136 487.6 316 71.8
CANSAT64G3016 Cannabis sativa HOM05D004085 ORTHO05D005189 9.1e-136 487.3 315 70.8
AL3G42500 Arabidopsis lyrata HOM05D004085 ORTHO05D005189 1.2e-135 486.9 315 71.1
Glyma.05G183800 Glycine max HOM05D004085 ORTHO05D005189 1.2e-135 486.9 316 69.9
VMungo0251G3520 Vigna mungo HOM05D004085 ORTHO05D005189 1.2e-135 486.9 338 67.5
Ca_22870_v3 Cicer arietinum L. HOM05D004085 ORTHO05D005189 2.0e-135 486.1 318 72.0
MSTRG.779 Avicennia marina HOM05D004085 ORTHO05D005189 2.7e-135 485.7 317 72.2
Cfa008850 Carpinus fangiana HOM05D004085 ORTHO05D005189 5.9e-135 484.6 303 73.9
arahy.Tifrunner.gnm1.ann1.34XV9Z Arachis hypogaea HOM05D004085 ORTHO05D005189 7.7e-135 484.2 316 70.9
MSTRG.7728 Avicennia marina HOM05D004085 ORTHO05D005189 7.7e-135 484.2 317 71.0
SalBow2G2246 Salvia bowleyana HOM05D004085 ORTHO05D005189 7.7e-135 484.2 317 71.0
Lalb_Chr20g0117031 Lupinus albus HOM05D004085 ORTHO05D005189 1.3e-134 483.4 314 70.4
Psat4g122760 Pisum sativum HOM05D004085 ORTHO05D005189 1.3e-134 483.4 316 71.5
Psat4g118760 Pisum sativum HOM05D004085 ORTHO05D005189 2.2e-134 482.6 316 70.6
AT2G03800 Arabidopsis thaliana HOM05D004085 ORTHO05D005189 5.0e-134 481.5 316 69.9
BcaC06g31165 Brassica carinata HOM05D004085 ORTHO05D005189 5.0e-134 481.5 316 69.9
Sed0007813 Sechium edule HOM05D004085 ORTHO05D005189 1.1e-133 480.3 320 70.6
THA.LOC104805212 Tarenaya hassleriana HOM05D004085 ORTHO05D005189 1.5e-133 479.9 318 70.4
Aa31LG2G6920 Aethionema arabicum HOM05D004085 ORTHO05D005189 5.5e-133 478.0 331 66.2
Cpa.g.sc1.168 Carica papaya HOM05D004085 ORTHO05D005189 7.2e-133 477.6 317 69.7
Haze_11859 Corylus avellana HOM05D004085 ORTHO05D005189 9.4e-133 477.2 369 62.6
BcaC03g17242 Brassica carinata HOM05D004085 ORTHO05D005189 2.7e-132 475.7 316 70.3
Dinv07974 Davidia involucrata HOM05D004085 ORTHO05D005189 3.6e-132 475.3 319 69.9
PGSC0003DMG402004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 4.7e-132 474.9 315 69.2
BcaC06g31143 Brassica carinata HOM05D004085 ORTHO05D005189 6.1e-132 474.6 316 69.0
A02p33630 Brassica napus HOM05D004085 ORTHO05D005189 8.0e-132 474.2 316 69.9
BolC2t11263H Brassica oleracea HOM05D004085 ORTHO05D005189 8.0e-132 474.2 316 69.9
Thhalv10004640m.g Eutrema salsugineum HOM05D004085 ORTHO05D005189 8.0e-132 474.2 316 69.0
C07p34240 Brassica napus HOM05D004085 ORTHO05D005189 1.8e-131 473.0 316 68.7
BolC7t43952H Brassica oleracea HOM05D004085 ORTHO05D005189 1.8e-131 473.0 316 68.7
RcHm_v2.0_Chr4g0437351 Rosa chinensis HOM05D004085 ORTHO05D005189 1.8e-131 473.0 318 68.6
Sp2g14620 Schrenkiella parvula HOM05D004085 ORTHO05D005189 1.8e-131 473.0 316 68.4
Solyc06g069390.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 1.8e-131 473.0 315 68.9
Lalb_Chr15g0084991 Lupinus albus HOM05D004085 ORTHO05D005189 2.3e-131 472.6 316 68.7
Sopen06g026660 Solanum pennellii HOM05D004085 ORTHO05D005189 2.3e-131 472.6 315 68.6
CAN.G587.59 Capsicum annuum HOM05D004085 ORTHO05D005189 4.0e-131 471.9 315 68.3
C02p51780 Brassica napus HOM05D004085 ORTHO05D005189 8.8e-131 470.7 316 69.6
Nitab4.5_0002863g0020 Nicotiana tabacum HOM05D004085 ORTHO05D005189 8.8e-131 470.7 315 67.9
CARHR146210 Cardamine hirsuta HOM05D004085 ORTHO05D005189 1.5e-130 469.9 316 69.0
FAN12G2772 Fragaria x ananassa HOM05D004085 ORTHO05D005189 1.5e-130 469.9 316 68.7
Duzib248G1362 Durio zibethinus HOM05D004085 ORTHO05D005189 2.0e-130 469.5 316 69.9
FAN22G1834 Fragaria x ananassa HOM05D004085 ORTHO05D005189 2.0e-130 469.5 316 68.7
A06p42850 Brassica napus HOM05D004085 ORTHO05D005189 3.4e-130 468.8 316 68.0
CDE01G0369 Ceratophyllum demersum HOM05D004085 ORTHO05D005189 4.4e-130 468.4 315 67.6
BraA06t27197Z Brassica rapa HOM05D004085 ORTHO05D005189 7.5e-130 467.6 316 68.0
HanXRQChr05g0157451 Helianthus annuus HOM05D004085 ORTHO05D005189 7.5e-130 467.6 315 68.9
BcaB07g30279 Brassica carinata HOM05D004085 ORTHO05D005189 9.8e-130 467.2 316 69.6
Sabra15G0078600 Salix brachista HOM05D004085 ORTHO05D005189 9.8e-130 467.2 315 68.3
PGR044G1995 Punica granatum HOM05D004085 ORTHO05D005189 1.3e-129 466.8 322 66.1
ECA246G2852 Erigeron canadensis HOM05D004085 ORTHO05D005189 2.2e-129 466.1 315 68.6
ATR0691G189 Amborella trichopoda HOM05D004085 ORTHO05D005189 3.7e-129 465.3 315 67.0
Gohir.D11G037500 Gossypium hirsutum HOM05D004085 ORTHO05D005189 3.7e-129 465.3 315 67.3
Potri.015G048700 Populus trichocarpa HOM05D004085 ORTHO05D005189 3.7e-129 465.3 315 67.6
Gorai.007G040300 Gossypium raimondii HOM05D004085 ORTHO05D005189 4.8e-129 464.9 315 67.3
Os08g0339200 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 8.3e-129 464.2 318 70.4
CSS0016924 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 2.0e-127 459.5 315 68.9
Lsat_1_v5_gn_5_23401 Lactuca sativa HOM05D004085 ORTHO05D005189 7.7e-127 457.6 315 67.3
Zm00001eb276680 Zea mays HOM05D004085 ORTHO05D005189 1.1e-125 453.8 321 67.3
Hund25155 Selenicereus undatus HOM05D004085 ORTHO05D005189 2.5e-125 452.6 389 57.1
CSS0006421 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 3.3e-125 452.2 315 66.7
Manes.06G081100 Manihot esculenta HOM05D004085 ORTHO05D005189 5.5e-125 451.4 319 66.8
EL10Ac6g14673 Beta vulgaris HOM05D004085 ORTHO05D005189 1.4e-123 446.8 336 63.7
CSS0030921 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 5.2e-123 444.9 317 67.2
Peaxi162Scf00013g00834 Petunia axillaris HOM05D004085 ORTHO05D005189 6.8e-123 444.5 307 66.8
AUR62007873 Chenopodium quinoa HOM05D004085 ORTHO05D005189 2.6e-122 442.6 315 65.7
COL.COLO4_27493 Corchorus olitorius HOM05D004085 ORTHO05D005189 5.7e-122 441.4 293 67.2
AUR62003058 Chenopodium quinoa HOM05D004085 ORTHO05D005189 2.2e-121 439.5 315 65.1
SGA_v2.0_scaffold36G14490 Striga asiatica HOM05D004085 ORTHO05D005189 4.9e-121 438.3 317 66.2
Nitab4.5_0002449g0030 Nicotiana tabacum HOM05D004085 ORTHO05D005189 2.0e-119 433.0 315 64.4
FAN07G2517 Fragaria x ananassa HOM05D004085 ORTHO05D005189 3.9e-118 428.7 332 61.7
Migut.L01162 Erythranthe guttata HOM05D004085 ORTHO05D005189 1.1e-117 427.2 284 71.1
MBI14_g08107_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 4.3e-117 425.2 266 72.6
HPP92_003714 Vanilla planifolia HOM05D004085 ORTHO05D005189 3.6e-116 422.2 289 69.2
Mapoly0007s0171 Marchantia polymorpha HOM05D004085 ORTHO05D005189 4.9e-113 411.8 324 59.9
Lj5A137T62 Lonicera japonica HOM05D004085 ORTHO05D005189 3.2e-112 409.1 289 68.2
Gohir.A11G034100 Gossypium hirsutum HOM05D004085 ORTHO05D005189 4.6e-111 405.2 315 61.0
Cpa.g.sc3.236 Carica papaya HOM05D004085 ORTHO05D005189 1.3e-110 403.7 337 57.3
SHI14335 Sapria himalayana HOM05D004085 ORTHO05D005189 4.4e-106 388.7 332 57.8
COL.COLO4_27802 Corchorus olitorius HOM05D004085 ORTHO05D005189 8.6e-102 374.4 321 59.5
MD16G1055500 Malus domestica HOM05D004085 ORTHO05D005189 4.3e-101 372.1 303 62.4
SMO146G0350 Selaginella moellendorffii HOM05D004085 ORTHO05D005189 5.6e-101 371.7 321 56.4
AagrBONN_evm.TU.Sc2ySwM_344.2928 Anthoceros agrestis HOM05D004085 ORTHO05D005189 2.1e-100 369.8 317 56.8
Pp3c4_31680 Physcomitrium patens HOM05D004085 ORTHO05D005189 1.5e-98 363.6 317 55.2
Pp3c3_10070 Physcomitrium patens HOM05D004085 ORTHO05D005189 1.3e-97 360.5 317 57.1
Eucgr.K02549 Eucalyptus grandis HOM05D004085 ORTHO05D005189 3.7e-97 359.0 315 54.0
Oeu045347.1 Olea europaea HOM05D004085 ORTHO05D005189 1.9e-96 356.7 242 68.6
BraA02t08382Z Brassica rapa HOM05D004085 ORTHO05D005189 9.2e-96 354.4 226 71.7
Nn3g17533 Nelumbo nucifera HOM05D004085 ORTHO05D005189 1.0e-94 350.9 293 58.7
CBR_g34346 Chara braunii HOM05D004085 ORTHO05D005189 3.6e-84 315.8 353 43.9
FvH4_4g29300 Fragaria vesca HOM05D004085 ORTHO05D005189 4.9e-81 305.4 199 70.4
arahy.Tifrunner.gnm1.ann1.A9XC2E Arachis hypogaea HOM05D004085 ORTHO05D005189 3.9e-78 295.8 211 67.8
unitig_22.g6891 Utricularia gibba HOM05D004085 ORTHO05D005189 1.1e-75 287.7 218 61.9
PGSC0003DMG401004079 Solanum tuberosum HOM05D004085 ORTHO05D005189 1.7e-73 280.4 180 72.8
C07p34190 Brassica napus HOM05D004085 ORTHO05D005189 3.8e-65 252.7 185 65.4
Os09g0248000 Oryza sativa ssp. japonica HOM05D004085 ORTHO05D005189 6.5e-65 251.9 165 69.1
CSS0002590 Camellia sinensis var. sinensis HOM05D004085 ORTHO05D005189 8.4e-65 251.5 304 47.4
TPR.G27985 Trifolium pratense HOM05D004085 ORTHO05D005189 3.3e-61 239.6 151 73.5
Oeu045348.1 Olea europaea HOM05D004085 ORTHO05D005189 2.1e-60 236.9 144 73.6
Solyc04g005300.4 Solanum lycopersicum HOM05D004085 ORTHO05D005189 2.3e-54 216.9 140 69.3
MBI10_g36395_MAGBIO Magnolia biondii HOM05D004085 ORTHO05D005189 5.1e-46 189.1 148 56.8
Peaxi162Scf00098g00096 Petunia axillaris HOM05D004085 ORTHO05D005189 3.0e-38 163.3 124 61.3
BolC7t43946H Brassica oleracea HOM05D004085 ORTHO05D005189 1.1e-37 161.4 95 74.7
HPP92_003722 Vanilla planifolia HOM05D004085 ORTHO05D005189 7.4e-37 158.7 124 63.7
SEGI_05680 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 1.3e-36 157.9 110 63.6
MD05G1127700 Malus domestica HOM05D004085 ORTHO05D005189 4.0e-30 136.3 92 71.7
TPR.G40588 Trifolium pratense HOM05D004085 ORTHO05D005189 1.5e-29 134.4 69 81.2
Lj3C737G8 Lonicera japonica HOM05D004085 ORTHO05D005189 2.6e-29 133.7 75 77.3
BolC7t43934H Brassica oleracea HOM05D004085 ORTHO05D005189 1.3e-28 131.3 105 60.0
TPR.G3316 Trifolium pratense HOM05D004085 ORTHO05D026373 8.2e-28 128.6 90 66.7
Thecc.03G108100 Theobroma cacao HOM05D004085 ORTHO05D026373 4.7e-23 112.8 86 58.1
Actinidia04797 Actinidia chinensis HOM05D004085 ORTHO05D026373 1.5e-21 107.8 74 66.2
Duzib068G1264 Durio zibethinus HOM05D004085 ORTHO05D005189 1.5e-21 107.8 67 68.7
Lj5A720T31 Lonicera japonica HOM05D004085 ORTHO05D026373 1.2e-18 98.2 165 37.0
SEGI_34269 Sequoiadendron giganteum HOM05D004085 ORTHO05D005189 1.6e-18 97.8 57 75.4
BcaC06g31148 Brassica carinata HOM05D004085 ORTHO05D005189 1.5e-16 91.3 72 58.3
Ciclev10024148m.g Citrus clementina HOM05D004085 ORTHO05D043374 1.2e-10 71.6 43 65.1
CANSAT64G2585 Cannabis sativa HOM05D004085 ORTHO05D043374 5.0e-09 66.2 86 38.4
HPP92_003723 Vanilla planifolia HOM05D004085 ORTHO05D005189 8.6e-09 65.5 80 50.0
Eucgr.B03119 Eucalyptus grandis HOM05D004085 ORTHO05D195170 8.0e-07 58.9 56 58.9


User provided reference genes

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