Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007183 Daucus carota HOM05D003751 ORTHO05D004765 5.0e-87 325.5 345 100.0
Ah.03g139090 Amaranthus hybridus HOM05D003751 ORTHO05D004765 8.4e-50 201.8 335 84.5
Hund05853 Selenicereus undatus HOM05D003751 ORTHO05D004765 1.9e-49 200.7 336 84.5
Sc11g0002320 Simmondsia chinensis HOM05D003751 ORTHO05D004765 7.1e-49 198.7 340 82.1
Hund14089 Selenicereus undatus HOM05D003751 ORTHO05D004765 9.2e-49 198.4 336 83.6
Rhsim12G0134600 Rhododendron simsii HOM05D003751 ORTHO05D004765 1.6e-48 197.6 350 77.1
Lsat_1_v5_gn_4_12041 Lactuca sativa HOM05D003751 ORTHO05D004765 6.6e-47 192.2 345 82.3
QL03p071051 Quercus lobata HOM05D003751 ORTHO05D004765 6.6e-47 192.2 340 82.9
GSVIVG01012205001 Vitis vinifera HOM05D003751 ORTHO05D004765 2.5e-46 190.3 341 83.0
vmacro01326 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 4.3e-46 189.5 370 60.5
Lj6A782T110 Lonicera japonica HOM05D003751 ORTHO05D004765 7.3e-46 188.7 342 83.6
Duzib205G0623 Durio zibethinus HOM05D003751 ORTHO05D004765 9.6e-46 188.3 336 83.6
Manes.05G108200 Manihot esculenta HOM05D003751 ORTHO05D004765 2.1e-45 187.2 339 81.1
Cpa.g.sc1.101 Carica papaya HOM05D003751 ORTHO05D004765 6.2e-45 185.7 339 81.7
AUR62007943 Chenopodium quinoa HOM05D003751 ORTHO05D004765 6.2e-45 185.7 333 72.1
Cfa008900 Carpinus fangiana HOM05D003751 ORTHO05D004765 2.4e-44 183.7 339 82.9
TAR622G0005 Trochodendron aralioides HOM05D003751 ORTHO05D004765 2.4e-44 183.7 346 77.5
AUR62003123 Chenopodium quinoa HOM05D003751 ORTHO05D004765 4.0e-44 183.0 256 82.0
Haze_11929 Corylus avellana HOM05D003751 ORTHO05D004765 4.0e-44 183.0 381 63.8
HanXRQChr12g0379561 Helianthus annuus HOM05D003751 ORTHO05D004765 6.9e-44 182.2 342 82.2
PSO063G1864 Papaver somniferum HOM05D003751 ORTHO05D004765 6.9e-44 182.2 337 82.2
Sabra08G0070200 Salix brachista HOM05D003751 ORTHO05D004765 6.9e-44 182.2 339 80.5
Hma1.2p1_0357F.1_g134490 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 1.2e-43 181.4 350 80.6
Peaxi162Scf00097g00610 Petunia axillaris HOM05D003751 ORTHO05D004765 1.5e-43 181.0 364 57.7
Potri.008G093400 Populus trichocarpa HOM05D003751 ORTHO05D004765 1.5e-43 181.0 339 80.5
Lsat_1_v5_gn_8_48161 Lactuca sativa HOM05D003751 ORTHO05D004765 2.0e-43 180.6 347 80.4
TPR.G24438 Trifolium pratense HOM05D003751 ORTHO05D004765 2.0e-43 180.6 339 82.0
Actinidia33247 Actinidia chinensis HOM05D003751 ORTHO05D004765 2.6e-43 180.3 342 82.7
COL.COLO4_36892 Corchorus olitorius HOM05D003751 ORTHO05D004765 3.4e-43 179.9 338 81.4
Sed0012304 Sechium edule HOM05D003751 ORTHO05D004765 4.4e-43 179.5 336 81.2
CiPaw.05G127300 Carya illinoinensis HOM05D003751 ORTHO05D004765 5.8e-43 179.1 339 82.3
BraA03t13807Z Brassica rapa HOM05D003751 ORTHO05D004765 7.6e-43 178.7 352 71.3
Ca_04940_v3 Cicer arietinum L. HOM05D003751 ORTHO05D004765 7.6e-43 178.7 339 81.7
HanXRQChr08g0211521 Helianthus annuus HOM05D003751 ORTHO05D004765 9.9e-43 178.3 345 80.6
Manes.01G029800 Manihot esculenta HOM05D003751 ORTHO05D004765 9.9e-43 178.3 335 80.3
Actinidia12325 Actinidia chinensis HOM05D003751 ORTHO05D004765 1.3e-42 177.9 341 82.4
CiPaw.06G090700 Carya illinoinensis HOM05D003751 ORTHO05D004765 1.7e-42 177.6 339 81.7
Psat2g128600 Pisum sativum HOM05D003751 ORTHO05D004765 1.7e-42 177.6 340 81.8
ECA233G2546 Erigeron canadensis HOM05D003751 ORTHO05D004765 2.2e-42 177.2 342 81.6
Nitab4.5_0000720g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 2.2e-42 177.2 340 81.5
Glyma.02G114800 Glycine max HOM05D003751 ORTHO05D004765 2.9e-42 176.8 338 82.0
SGA_v2.0_scaffold36G14436 Striga asiatica HOM05D003751 ORTHO05D004765 2.9e-42 176.8 343 81.0
Nn3g17386 Nelumbo nucifera HOM05D003751 ORTHO05D004765 3.8e-42 176.4 344 79.7
Migut.L01211 Erythranthe guttata HOM05D003751 ORTHO05D004765 4.9e-42 176.0 344 80.8
Nitab4.5_0002832g0050 Nicotiana tabacum HOM05D003751 ORTHO05D004765 4.9e-42 176.0 337 81.9
Potri.010G160700 Populus trichocarpa HOM05D003751 ORTHO05D004765 4.9e-42 176.0 336 80.4
Solyc01g011040.3 Solanum lycopersicum HOM05D003751 ORTHO05D004765 8.4e-42 175.3 339 82.3
Sopen01g034040 Solanum pennellii HOM05D003751 ORTHO05D004765 8.4e-42 175.3 339 82.3
VMungo1215G2610 Vigna mungo HOM05D003751 ORTHO05D004765 8.4e-42 175.3 338 81.4
Lj2g0008638 Lotus japonicus HOM05D003751 ORTHO05D004765 1.1e-41 174.9 337 82.5
Lalb_Chr17g0341071 Lupinus albus HOM05D003751 ORTHO05D004765 1.1e-41 174.9 339 82.3
Phvul.002G081300 Phaseolus vulgaris HOM05D003751 ORTHO05D004765 1.4e-41 174.5 338 81.1
PGSC0003DMG400004190 Solanum tuberosum HOM05D003751 ORTHO05D004765 1.4e-41 174.5 339 82.0
MD13G1065200 Malus domestica HOM05D003751 ORTHO05D004765 1.9e-41 174.1 341 80.9
SGA_v2.0_scaffold16G07765 Striga asiatica HOM05D003751 ORTHO05D004765 1.9e-41 174.1 342 81.0
CAN.G541.15 Capsicum annuum HOM05D003751 ORTHO05D004765 2.4e-41 173.7 339 81.4
Nn4g23361 Nelumbo nucifera HOM05D003751 ORTHO05D004765 2.4e-41 173.7 344 79.1
Gorai.008G196500 Gossypium raimondii HOM05D003751 ORTHO05D004765 3.2e-41 173.3 342 80.1
Prupe.1G283000 Prunus persica HOM05D003751 ORTHO05D004765 3.2e-41 173.3 341 81.5
arahy.Tifrunner.gnm1.ann1.V223R1 Arachis hypogaea HOM05D003751 ORTHO05D004765 4.2e-41 172.9 337 82.5
arahy.Tifrunner.gnm1.ann1.Y3WTJM Arachis hypogaea HOM05D003751 ORTHO05D004765 4.2e-41 172.9 337 82.5
Glyma.01G056300 Glycine max HOM05D003751 ORTHO05D004765 4.2e-41 172.9 338 81.7
Gohir.A12G180500 Gossypium hirsutum HOM05D003751 ORTHO05D004765 4.2e-41 172.9 336 79.8
Ciclev10021138m.g Citrus clementina HOM05D003751 ORTHO05D004765 5.4e-41 172.6 344 79.7
Gorai.001G078000 Gossypium raimondii HOM05D003751 ORTHO05D004765 5.4e-41 172.6 336 80.7
RcHm_v2.0_Chr4g0438711 Rosa chinensis HOM05D003751 ORTHO05D004765 5.4e-41 172.6 345 79.7
FAN22G1318 Fragaria x ananassa HOM05D003751 ORTHO05D004765 9.3e-41 171.8 339 80.8
Gohir.A07G069400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 9.3e-41 171.8 336 80.7
Medtr5g043800 Medicago truncatula HOM05D003751 ORTHO05D004765 9.3e-41 171.8 339 81.7
FAN17G0137 Fragaria x ananassa HOM05D003751 ORTHO05D004765 1.2e-40 171.4 339 80.5
Lalb_Chr10g0098641 Lupinus albus HOM05D003751 ORTHO05D004765 1.2e-40 171.4 327 83.8
Peaxi162Scf00314g00122 Petunia axillaris HOM05D003751 ORTHO05D004765 2.7e-40 170.2 315 85.4
PGR102G2931 Punica granatum HOM05D003751 ORTHO05D004765 3.5e-40 169.9 339 80.2
BolC7t45015H Brassica oleracea HOM05D003751 ORTHO05D004765 4.6e-40 169.5 359 68.0
CDE07G1785 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 4.6e-40 169.5 340 80.0
Thecc.03G096900 Theobroma cacao HOM05D003751 ORTHO05D004765 4.6e-40 169.5 336 81.5
Eucgr.B03173 Eucalyptus grandis HOM05D003751 ORTHO05D004765 6.0e-40 169.1 342 81.0
Gohir.D07G073800 Gossypium hirsutum HOM05D003751 ORTHO05D004765 6.0e-40 169.1 336 80.1
MSTRG.7761 Avicennia marina HOM05D003751 ORTHO05D004765 1.3e-39 167.9 342 80.7
MD16G1063500 Malus domestica HOM05D003751 ORTHO05D004765 1.7e-39 167.5 339 79.9
BraA09t36376Z Brassica rapa HOM05D003751 ORTHO05D004765 2.3e-39 167.2 360 67.2
Migut.E00057 Erythranthe guttata HOM05D003751 ORTHO05D004765 2.3e-39 167.2 338 81.1
Cc11_g12270 Coffea canephora HOM05D003751 ORTHO05D004765 3.0e-39 166.8 335 82.1
A03p46870 Brassica napus HOM05D003751 ORTHO05D004765 5.1e-39 166.0 343 79.6
CANSAT80G0608 Cannabis sativa HOM05D003751 ORTHO05D004765 5.1e-39 166.0 338 80.2
CANSAT80G1362 Cannabis sativa HOM05D003751 ORTHO05D004765 5.1e-39 166.0 338 80.2
CsaV3_5G033180 Cucumis sativus L. HOM05D003751 ORTHO05D004765 6.6e-39 165.6 334 80.8
Thhalv10004587m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 6.6e-39 165.6 343 79.3
THA.LOC104818332 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 6.6e-39 165.6 336 81.0
CSS0038990 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 8.7e-39 165.2 350 71.4
AL8G37900 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 1.1e-38 164.9 343 79.0
Dinv34089 Davidia involucrata HOM05D003751 ORTHO05D004765 1.1e-38 164.9 318 83.6
Thecc.02G335000 Theobroma cacao HOM05D003751 ORTHO05D004765 1.1e-38 164.9 336 78.6
CARHR274990 Cardamine hirsuta HOM05D003751 ORTHO05D004765 1.9e-38 164.1 343 79.0
THA.LOC104801343 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 2.5e-38 163.7 336 79.2
AT5G61240 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 3.3e-38 163.3 343 79.0
Carub.0008s2191 Capsella rubella HOM05D003751 ORTHO05D004765 3.3e-38 163.3 343 79.3
Duzib251G0914 Durio zibethinus HOM05D003751 ORTHO05D004765 4.3e-38 162.9 336 79.5
TWI79G0662 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 4.3e-38 162.9 334 80.2
BcaC06g33170 Brassica carinata HOM05D003751 ORTHO05D004765 5.6e-38 162.5 343 79.0
CSS0000444 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 5.6e-38 162.5 346 67.3
Sp2g24470 Schrenkiella parvula HOM05D003751 ORTHO05D004765 5.6e-38 162.5 335 80.6
SEGI_02286 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 1.3e-37 161.4 341 78.0
C09p08130 Brassica napus HOM05D003751 ORTHO05D004765 1.6e-37 161.0 341 79.2
A09p07270 Brassica napus HOM05D003751 ORTHO05D004765 2.1e-37 160.6 341 79.2
BcaC06g33219 Brassica carinata HOM05D003751 ORTHO05D004765 2.8e-37 160.2 343 78.7
C07p44920 Brassica napus HOM05D003751 ORTHO05D004765 2.8e-37 160.2 343 78.7
Hma1.2p1_0322F.1_g124910 Hydrangea macrophylla HOM05D003751 ORTHO05D004765 2.8e-37 160.2 341 79.2
THA.LOC104824065 Tarenaya hassleriana HOM05D003751 ORTHO05D004765 3.6e-37 159.8 335 78.8
Aa31LG11G2120 Aethionema arabicum HOM05D003751 ORTHO05D004765 6.2e-37 159.1 339 79.6
BcaC04g23458 Brassica carinata HOM05D003751 ORTHO05D004765 6.2e-37 159.1 341 79.2
Actinidia19010 Actinidia chinensis HOM05D003751 ORTHO05D004765 8.1e-37 158.7 336 77.7
Sed0016795 Sechium edule HOM05D003751 ORTHO05D004765 8.1e-37 158.7 339 79.6
SalBow2G2522 Salvia bowleyana HOM05D003751 ORTHO05D004765 1.1e-36 158.3 354 77.1
MSTRG.738 Avicennia marina HOM05D003751 ORTHO05D004765 1.8e-36 157.5 343 78.4
DCAR_005254 Daucus carota HOM05D003751 ORTHO05D004765 5.3e-36 156.0 121 70.2
ATR0064G031 Amborella trichopoda HOM05D003751 ORTHO05D004765 1.2e-35 154.8 340 79.1
COL.COLO4_27919 Corchorus olitorius HOM05D003751 ORTHO05D004765 1.2e-35 154.8 336 76.2
DCAR_016919 Daucus carota HOM05D003751 ORTHO05D004765 1.2e-35 154.8 120 70.8
SalBow2G2568 Salvia bowleyana HOM05D003751 ORTHO05D004765 1.2e-35 154.8 354 69.5
Sp1g12050 Schrenkiella parvula HOM05D003751 ORTHO05D004765 3.4e-35 153.3 335 77.9
TWI75G1095 Tripterygium wilfordii HOM05D003751 ORTHO05D004765 4.5e-35 152.9 264 76.1
PSO384G1483 Papaver somniferum HOM05D003751 ORTHO05D004765 5.8e-35 152.5 337 78.6
Sabra10G0122300 Salix brachista HOM05D003751 ORTHO05D004765 9.9e-35 151.8 258 76.4
Gohir.D02G128600 Gossypium hirsutum HOM05D003751 ORTHO05D004765 3.8e-34 149.8 338 76.0
Gorai.005G144300 Gossypium raimondii HOM05D003751 ORTHO05D004765 3.8e-34 149.8 338 76.0
ClCG09G022210 Citrullus lanatus HOM05D003751 ORTHO05D004765 7.1e-33 145.6 343 67.3
Aqoxy3G03571 Aquilegia oxysepala HOM05D003751 ORTHO05D004765 9.3e-33 145.2 338 77.5
SHI26375 Sapria himalayana HOM05D003751 ORTHO05D004765 9.3e-33 145.2 259 62.9
AL1G25740 Arabidopsis lyrata HOM05D003751 ORTHO05D004765 1.2e-32 144.8 334 76.3
AT1G13910 Arabidopsis thaliana HOM05D003751 ORTHO05D004765 1.6e-32 144.4 334 76.0
Gohir.D12G183125 Gossypium hirsutum HOM05D003751 ORTHO05D004765 3.9e-31 139.8 342 69.9
Gohir.D12G183200 Gossypium hirsutum HOM05D003751 ORTHO05D004765 3.9e-31 139.8 342 69.9
Cpa.g.sc94.5 Carica papaya HOM05D003751 ORTHO05D004765 5.1e-31 139.4 344 47.7
QL03p070738 Quercus lobata HOM05D003751 ORTHO05D004765 6.7e-31 139.0 124 64.5
FAN12G0947 Fragaria x ananassa HOM05D003751 ORTHO05D004765 3.3e-30 136.7 357 66.9
FvH4_4g30420 Fragaria vesca HOM05D003751 ORTHO05D004765 1.3e-29 134.8 339 76.4
BolC9t53725H Brassica oleracea HOM05D003751 ORTHO05D006139 1.6e-29 134.4 338 68.6
SalBow2G0317 Salvia bowleyana HOM05D003751 ORTHO05D004765 2.1e-29 134.0 239 79.9
CsaV3_5G025510 Cucumis sativus L. HOM05D003751 ORTHO05D004765 8.1e-29 132.1 336 76.5
MBI16_g16360_MAGBIO Magnolia biondii HOM05D003751 ORTHO05D004765 8.1e-29 132.1 337 77.2
MELO3C002928.2 Cucumis melo HOM05D003751 ORTHO05D004765 1.1e-28 131.7 339 77.0
Zm00001eb008460 Zea mays HOM05D003751 ORTHO05D004765 1.1e-28 131.7 118 62.7
Thhalv10008166m.g Eutrema salsugineum HOM05D003751 ORTHO05D004765 4.0e-28 129.8 335 74.6
HPP92_007743 Vanilla planifolia HOM05D003751 ORTHO05D004765 9.0e-28 128.6 346 74.6
CDE04G0854 Ceratophyllum demersum HOM05D003751 ORTHO05D004765 3.4e-27 126.7 116 62.1
Dinv38780 Davidia involucrata HOM05D003751 ORTHO05D004765 4.5e-27 126.3 120 59.2
Carub.0001s1361 Capsella rubella HOM05D003751 ORTHO05D004765 5.8e-27 125.9 257 72.8
vmacro16373 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 3.8e-26 123.2 118 62.7
vmacro23251 Vaccinium macrocarpon HOM05D003751 ORTHO05D004765 3.8e-26 123.2 118 62.7
FAN07G2601 Fragaria x ananassa HOM05D003751 ORTHO05D004765 3.2e-25 120.2 116 61.2
MELO3C012139.2 Cucumis melo HOM05D003751 ORTHO05D004765 4.2e-25 119.8 115 60.9
ClCG05G023830 Citrullus lanatus HOM05D003751 ORTHO05D004765 5.5e-25 119.4 110 61.8
AagrBONN_evm.TU.Sc2ySwM_228.5257 Anthoceros agrestis HOM05D003751 ORTHO05D004765 9.3e-25 118.6 342 71.9
Os03g0211900 Oryza sativa ssp. japonica HOM05D003751 ORTHO05D004765 2.7e-24 117.1 113 61.1
Aa31LG1G1100 Aethionema arabicum HOM05D002953 ORTHO05D003249 2.5e-22 110.5 259 68.3
SMO307G0068 Selaginella moellendorffii HOM05D003751 ORTHO05D004765 3.3e-22 110.2 323 74.6
Hund25193 Selenicereus undatus HOM05D003751 ORTHO05D004765 5.6e-22 109.4 100 61.0
Actinidia28633 Actinidia chinensis HOM05D003751 ORTHO05D004765 1.3e-21 108.2 120 94.2
CSS0008157 Camellia sinensis var. sinensis HOM05D003751 ORTHO05D004765 3.1e-20 103.6 120 92.5
Dinv16710 Davidia involucrata HOM05D003751 ORTHO05D004765 4.0e-20 103.2 261 69.7
CARHR014280 Cardamine hirsuta HOM05D003751 ORTHO05D004765 2.6e-19 100.5 116 48.3
Lj3A1031T31 Lonicera japonica HOM05D003751 ORTHO05D004765 1.3e-18 98.2 120 58.3
Nitab4.5_0017073g0010 Nicotiana tabacum HOM05D003751 ORTHO05D004765 2.5e-17 94.0 91 57.1
Oeu031422.1 Olea europaea HOM05D003751 ORTHO05D004765 2.7e-16 90.5 62 72.6
Nitab4.5_0004304g0080 Nicotiana tabacum HOM05D003751 ORTHO05D004765 5.7e-14 82.8 99 50.5
Gohir.A03G103400 Gossypium hirsutum HOM05D003751 ORTHO05D004765 1.4e-12 78.2 253 84.6
CAN.G607.6 Capsicum annuum HOM05D003751 ORTHO05D024790 3.1e-12 77.0 41 87.8
Gohir.D13G128551 Gossypium hirsutum HOM05D003751 ORTHO05D024790 3.4e-11 73.6 41 87.8
Gorai.013G144600 Gossypium raimondii HOM05D003751 ORTHO05D024790 2.9e-10 70.5 41 85.4
BolC2t12198H Brassica oleracea HOM05D003751 ORTHO05D017703 8.5e-10 68.9 59 69.5
SEGI_40768 Sequoiadendron giganteum HOM05D003751 ORTHO05D004765 2.5e-09 67.4 34 76.5
C02p61470 Brassica napus HOM05D003751 ORTHO05D017703 7.2e-09 65.9 59 66.1
SMO239G0097 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 1.6e-08 64.7 96 41.7
Sopen01g022300 Solanum pennellii HOM05D003751 ORTHO05D004765 2.7e-08 63.9 37 86.5
Sopen05g021560 Solanum pennellii HOM05D003751 ORTHO05D004765 1.0e-07 62.0 35 74.3
Sopen05g021540 Solanum pennellii HOM05D003751 ORTHO05D004765 1.4e-07 61.6 35 80.0
SMO239G0021 Selaginella moellendorffii HOM05D003751 ORTHO05D011646 8.8e-07 58.9 106 36.8
BraA02t09094Z Brassica rapa HOM05D003751 ORTHO05D004765 1.1e-06 58.5 42 71.4


User provided reference genes

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