Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007171 Daucus carota HOM05D006399 ORTHO05D007988 4.3e-283 977.2 473 100.0
CSS0033869 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 7.6e-179 630.9 485 65.2
Dinv34129 Davidia involucrata HOM05D006399 ORTHO05D007988 7.6e-179 630.9 451 67.0
Oeu005762.1 Olea europaea HOM05D006399 ORTHO05D007988 8.5e-178 627.5 431 68.9
Haze_11970 Corylus avellana HOM05D006399 ORTHO05D007988 6.7e-175 617.8 481 65.3
Actinidia17748 Actinidia chinensis HOM05D006399 ORTHO05D007988 2.5e-174 615.9 452 65.7
Rhsim12G0079500 Rhododendron simsii HOM05D006399 ORTHO05D007988 3.7e-173 612.1 486 62.8
Actinidia31971 Actinidia chinensis HOM05D006399 ORTHO05D007988 1.5e-171 606.7 446 64.1
CiPaw.05G130700 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.6e-171 605.9 433 67.7
Prupe.1G278300 Prunus persica HOM05D006399 ORTHO05D007988 4.5e-171 605.1 448 67.4
Cfa008944 Carpinus fangiana HOM05D006399 ORTHO05D007988 4.7e-168 595.1 444 66.2
TAR622G1196 Trochodendron aralioides HOM05D006399 ORTHO05D007988 3.9e-167 592.0 439 66.5
Sabra08G0067200 Salix brachista HOM05D006399 ORTHO05D007988 2.6e-166 589.3 445 66.3
Thecc.02G341500 Theobroma cacao HOM05D006399 ORTHO05D007988 5.7e-166 588.2 427 65.3
Gorai.013G088500 Gossypium raimondii HOM05D006399 ORTHO05D007988 7.4e-166 587.8 443 64.1
Potri.008G089800 Populus trichocarpa HOM05D006399 ORTHO05D007988 3.7e-165 585.5 445 66.1
Manes.05G105200 Manihot esculenta HOM05D006399 ORTHO05D007988 1.4e-164 583.6 429 66.9
Cc00_g16610 Coffea canephora HOM05D006399 ORTHO05D007988 2.4e-164 582.8 472 61.2
Gohir.D13G077400 Gossypium hirsutum HOM05D006399 ORTHO05D007988 2.0e-163 579.7 447 63.5
Nitab4.5_0000145g0020 Nicotiana tabacum HOM05D006399 ORTHO05D007988 1.0e-162 577.4 446 65.0
Atru.chr11.1740 Acer truncatum HOM05D006399 ORTHO05D007988 3.8e-162 575.5 453 63.8
CANSAT64G0537 Cannabis sativa HOM05D006399 ORTHO05D007988 3.8e-162 575.5 473 60.9
FAN07G1460 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.8e-162 575.5 489 60.1
FvH4_4g30980 Fragaria vesca HOM05D006399 ORTHO05D007988 2.5e-161 572.8 480 60.8
FAN12G0639 Fragaria x ananassa HOM05D006399 ORTHO05D007988 4.2e-161 572.0 450 63.1
RcHm_v2.0_Chr4g0439341 Rosa chinensis HOM05D006399 ORTHO05D007988 3.6e-160 568.9 487 60.4
Cpa.g.sc1.57 Carica papaya HOM05D006399 ORTHO05D007988 2.3e-159 566.2 474 60.3
Aqoxy3G00634 Aquilegia oxysepala HOM05D006399 ORTHO05D007988 8.8e-159 564.3 478 61.7
Nitab4.5_0004661g0030 Nicotiana tabacum HOM05D006399 ORTHO05D007988 4.4e-158 562.0 408 67.2
MD16G1068900 Malus domestica HOM05D006399 ORTHO05D007988 1.7e-157 560.1 414 66.9
Glyma.02G110300 Glycine max HOM05D006399 ORTHO05D007988 2.8e-157 559.3 440 62.0
Lj3C1034G10 Lonicera japonica HOM05D006399 ORTHO05D007988 3.7e-157 558.9 363 73.8
Duzib248G1019 Durio zibethinus HOM05D006399 ORTHO05D007988 8.2e-157 557.8 444 62.2
Lalb_Chr04g0255911 Lupinus albus HOM05D006399 ORTHO05D007988 2.4e-156 556.2 441 61.5
Lj2g0004295 Lotus japonicus HOM05D006399 ORTHO05D007988 7.0e-156 554.7 465 59.6
Nn3g17286 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.6e-155 553.5 431 61.7
Nn3g17302 Nelumbo nucifera HOM05D006399 ORTHO05D007988 1.6e-155 553.5 431 61.7
PSO210G1214 Papaver somniferum HOM05D006399 ORTHO05D007988 4.5e-155 552.0 461 60.5
HanXRQChr15g0476901 Helianthus annuus HOM05D006399 ORTHO05D007988 8.5e-154 547.7 476 60.7
Lsat_1_v5_gn_3_51980 Lactuca sativa HOM05D006399 ORTHO05D007988 1.1e-153 547.4 473 60.9
Phvul.003G046500 Phaseolus vulgaris HOM05D006399 ORTHO05D007988 1.9e-153 546.6 463 58.1
Cfa008945 Carpinus fangiana HOM05D006399 ORTHO05D007988 2.5e-153 546.2 458 61.1
VMungo1215G0113 Vigna mungo HOM05D006399 ORTHO05D007988 3.6e-152 542.3 436 60.8
Ca_04827_v3 Cicer arietinum L. HOM05D006399 ORTHO05D007988 1.0e-151 540.8 442 60.4
Eucgr.B03205 Eucalyptus grandis HOM05D006399 ORTHO05D007988 1.0e-151 540.8 432 60.4
Haze_11971 Corylus avellana HOM05D006399 ORTHO05D007988 6.7e-151 538.1 475 59.4
Glyma.01G052300 Glycine max HOM05D006399 ORTHO05D007988 1.2e-150 537.3 439 59.7
ECA246G3166 Erigeron canadensis HOM05D006399 ORTHO05D007988 3.3e-150 535.8 375 67.7
QL12p039367 Quercus lobata HOM05D006399 ORTHO05D007988 4.4e-150 535.4 426 62.2
Psat2g116280 Pisum sativum HOM05D006399 ORTHO05D007988 5.7e-150 535.0 438 59.1
TPR.G34705 Trifolium pratense HOM05D006399 ORTHO05D007988 1.7e-149 533.5 443 58.0
QL93p1999_0143 Quercus lobata HOM05D006399 ORTHO05D007988 1.4e-148 530.4 429 61.8
CiPaw.06G087600 Carya illinoinensis HOM05D006399 ORTHO05D007988 4.1e-148 528.9 429 60.8
Medtr5g042100 Medicago truncatula HOM05D006399 ORTHO05D007988 4.1e-148 528.9 439 58.3
QL03p069077 Quercus lobata HOM05D006399 ORTHO05D007988 1.2e-147 527.3 429 61.8
CAN.G1335.8 Capsicum annuum HOM05D006399 ORTHO05D007988 2.7e-147 526.2 474 57.4
THA.LOC104808694 Tarenaya hassleriana HOM05D006399 ORTHO05D007988 2.7e-147 526.2 453 59.8
CSS0044828 Camellia sinensis var. sinensis HOM05D006399 ORTHO05D007988 3.5e-147 525.8 452 60.0
PGSC0003DMG400018440 Solanum tuberosum HOM05D006399 ORTHO05D007988 1.1e-145 520.8 430 60.2
Migut.L01261 Erythranthe guttata HOM05D006399 ORTHO05D007988 1.9e-145 520.0 466 58.4
unitig_699.g19915 Utricularia gibba HOM05D006399 ORTHO05D007988 4.2e-145 518.8 436 59.4
Peaxi162Scf00222g00816 Petunia axillaris HOM05D006399 ORTHO05D007988 1.6e-144 516.9 464 56.9
Dinv07949 Davidia involucrata HOM05D006399 ORTHO05D007988 1.8e-143 513.5 443 60.5
Solyc05g007680.1 Solanum lycopersicum HOM05D006399 ORTHO05D007988 1.8e-143 513.5 430 60.9
Sopen05g003560 Solanum pennellii HOM05D006399 ORTHO05D007988 3.0e-143 512.7 429 61.1
PGR102G0590 Punica granatum HOM05D006399 ORTHO05D007988 5.2e-143 511.9 503 54.9
Dinv34130 Davidia involucrata HOM05D006399 ORTHO05D007988 8.8e-143 511.1 443 60.0
Eucgr.G02484 Eucalyptus grandis HOM05D006399 ORTHO05D007988 3.4e-142 509.2 451 56.1
QL12p039232 Quercus lobata HOM05D006399 ORTHO05D007988 1.3e-141 507.3 454 57.9
GSVIVG01005154001 Vitis vinifera HOM05D006399 ORTHO05D007988 2.8e-141 506.1 448 55.8
Thhalv10007591m.g Eutrema salsugineum HOM05D006399 ORTHO05D007988 3.7e-141 505.8 469 54.8
AL1G38940 Arabidopsis lyrata HOM05D006399 ORTHO05D007988 1.4e-140 503.8 383 62.9
AT1G26761 Arabidopsis thaliana HOM05D006399 ORTHO05D007988 4.1e-140 502.3 405 61.0
EL10Ac6g13248 Beta vulgaris HOM05D006399 ORTHO05D007988 9.1e-140 501.1 474 56.5
Sp1g22040 Schrenkiella parvula HOM05D006399 ORTHO05D007988 9.1e-140 501.1 481 54.3
Atru.chr11.1742 Acer truncatum HOM05D006399 ORTHO05D007988 4.5e-139 498.8 442 58.1
Ah.02g129470 Amaranthus hybridus HOM05D006399 ORTHO05D007988 1.3e-138 497.3 431 57.1
BraA09t39516Z Brassica rapa HOM05D006399 ORTHO05D007988 1.6e-136 490.3 392 61.0
Carub.0001s2425 Capsella rubella HOM05D006399 ORTHO05D007988 1.0e-135 487.6 470 53.8
Aa31LG7G8360 Aethionema arabicum HOM05D006399 ORTHO05D007988 1.4e-135 487.3 480 52.7
RcHm_v2.0_Chr4g0439361 Rosa chinensis HOM05D006399 ORTHO05D007988 1.4e-135 487.3 466 54.5
A09p40180 Brassica napus HOM05D006399 ORTHO05D007988 1.3e-133 480.7 393 60.3
AUR62005827 Chenopodium quinoa HOM05D006399 ORTHO05D007988 1.1e-132 477.6 435 54.9
BcaC05g26389 Brassica carinata HOM05D006399 ORTHO05D007988 5.4e-132 475.3 475 52.4
C05p24200 Brassica napus HOM05D006399 ORTHO05D007988 5.4e-132 475.3 475 52.4
BolC5t31156H Brassica oleracea HOM05D006399 ORTHO05D007988 5.4e-132 475.3 475 52.4
FAN07G2088 Fragaria x ananassa HOM05D006399 ORTHO05D007988 7.0e-132 474.9 426 57.0
Manes.01G033900 Manihot esculenta HOM05D006399 ORTHO05D007988 1.2e-131 474.2 472 53.2
FAN22G0994 Fragaria x ananassa HOM05D006399 ORTHO05D007988 2.7e-131 473.0 426 56.1
FvH4_4g30990 Fragaria vesca HOM05D006399 ORTHO05D007988 4.5e-131 472.2 476 53.4
FAN12G2051 Fragaria x ananassa HOM05D006399 ORTHO05D007988 5.0e-130 468.8 476 53.2
CDE06G2322 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 9.5e-129 464.5 463 52.9
CARHR025180 Cardamine hirsuta HOM05D006399 ORTHO05D007988 2.8e-128 463.0 379 59.4
PGR102G2002 Punica granatum HOM05D006399 ORTHO05D007988 2.8e-128 463.0 427 55.5
ATR0564G327 Amborella trichopoda HOM05D006399 ORTHO05D007988 3.0e-127 459.5 455 54.1
SEGI_38638 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 6.0e-123 445.3 431 51.3
GSVIVG01005153001 Vitis vinifera HOM05D006399 ORTHO05D007988 6.6e-122 441.8 458 50.9
CiPaw.05G130800 Carya illinoinensis HOM05D006399 ORTHO05D007988 2.1e-120 436.8 475 48.8
Pp3c5_14870 Physcomitrium patens HOM05D006399 ORTHO05D007988 3.3e-105 386.3 418 45.7
MSTRG.719 Avicennia marina HOM05D006399 ORTHO05D007988 5.6e-105 385.6 275 66.9
FAN22G2397 Fragaria x ananassa HOM05D006399 ORTHO05D007988 3.4e-102 376.3 476 46.0
AUR62032821 Chenopodium quinoa HOM05D006399 ORTHO05D007988 4.8e-80 302.8 261 57.9
MBI05_g36409_MAGBIO Magnolia biondii HOM05D006399 ORTHO05D007988 4.8e-80 302.8 327 51.1
Ciclev10032022m.g Citrus clementina HOM05D006399 ORTHO05D007988 6.4e-77 292.4 445 39.8
SalBow2G2517 Salvia bowleyana HOM05D006399 ORTHO05D007988 2.1e-75 287.3 212 63.7
Zm00001eb041520 Zea mays HOM05D006399 ORTHO05D007988 3.0e-74 283.5 359 43.2
Os08g0433300 Oryza sativa ssp. japonica HOM05D006399 ORTHO05D007988 1.1e-73 281.6 363 42.4
Cre06.g273050 Chlamydomonas reinhardtii HOM05D006399 ORTHO05D007988 4.0e-71 273.1 395 39.0
Lj7C251T2 Lonicera japonica HOM05D006399 ORTHO05D007988 2.6e-62 243.8 315 44.1
PRCOL_00004009 Prasinoderma coloniale HOM05D006399 ORTHO05D007988 2.1e-59 234.2 388 37.9
COL.COLO4_27992 Corchorus olitorius HOM05D006399 ORTHO05D007988 5.5e-44 183.0 158 58.9
Lj7P254T18 Lonicera japonica HOM05D006399 ORTHO05D007988 1.0e-34 152.1 112 67.0
TWI75G1459 Tripterygium wilfordii HOM05D006399 ORTHO05D007988 3.1e-31 140.6 185 43.8
CDE02G1760 Ceratophyllum demersum HOM05D006399 ORTHO05D007988 4.5e-30 136.7 129 54.3
AagrBONN_evm.TU.Sc2ySwM_362.1792 Anthoceros agrestis HOM05D006399 ORTHO05D007988 3.8e-29 133.7 380 28.9
Pp3c9_20180 Physcomitrium patens HOM05D006399 ORTHO05D007988 7.2e-28 129.4 398 28.1
SEGI_31378 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 7.2e-28 129.4 417 29.0
Pp3c11_9510 Physcomitrium patens HOM05D006399 ORTHO05D007988 8.8e-26 122.5 439 29.2
Hma1.2p1_0235F.1_g098770 Hydrangea macrophylla HOM05D006399 ORTHO05D007988 5.9e-22 109.8 57 84.2
SEGI_07124 Sequoiadendron giganteum HOM05D006399 ORTHO05D007988 1.3e-21 108.6 335 31.3
Pp3c2_5840 Physcomitrium patens HOM05D006399 ORTHO05D007988 9.8e-17 92.4 229 31.4
SGA_v2.0_scaffold109G31082 Striga asiatica HOM05D006399 ORTHO05D007988 2.2e-08 64.7 79 44.3


User provided reference genes

Program Settings