Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007146 Daucus carota HOM05D005097 ORTHO05D006186 1.4e-99 366.3 185 100.0
Hma1.2p1_0265F.1_g106660 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 3.6e-23 112.5 191 44.5
Duzib251G0564 Durio zibethinus HOM05D005097 ORTHO05D006186 6.1e-23 111.7 205 42.4
Hma1.2p1_0598F.1_g186730 Hydrangea macrophylla HOM05D005097 ORTHO05D006186 1.4e-22 110.5 197 43.1
TAR629G2181 Trochodendron aralioides HOM05D005097 ORTHO05D006186 1.8e-22 110.2 196 42.9
QL03p064734 Quercus lobata HOM05D005097 ORTHO05D006186 6.7e-22 108.2 203 44.8
Dinv34170 Davidia involucrata HOM05D005097 ORTHO05D006186 2.0e-21 106.7 186 42.5
COL.COLO4_22981 Corchorus olitorius HOM05D005097 ORTHO05D006186 9.7e-21 104.4 203 42.4
Gohir.A03G099800 Gossypium hirsutum HOM05D005097 ORTHO05D006186 9.7e-21 104.4 198 43.9
Cfa009001 Carpinus fangiana HOM05D005097 ORTHO05D006186 2.8e-20 102.8 202 44.1
Gohir.D13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 2.8e-20 102.8 200 44.0
Gorai.013G084000 Gossypium raimondii HOM05D005097 ORTHO05D006186 2.8e-20 102.8 200 44.0
Gohir.A13G073300 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.7e-20 102.4 197 42.6
Cpa.g.c36484 Carica papaya HOM05D005097 ORTHO05D006186 4.8e-20 102.1 180 45.6
Haze_12031 Corylus avellana HOM05D005097 ORTHO05D006186 8.2e-20 101.3 207 43.0
Atru.chr11.1825 Acer truncatum HOM05D005097 ORTHO05D006186 1.1e-19 100.9 205 43.9
CiPaw.06G083100 Carya illinoinensis HOM05D005097 ORTHO05D006186 9.1e-19 97.8 208 42.8
Gorai.005G140300 Gossypium raimondii HOM05D005097 ORTHO05D006186 1.6e-18 97.1 203 42.4
CiPaw.05G137400 Carya illinoinensis HOM05D005097 ORTHO05D006186 2.7e-18 96.3 206 38.8
Nitab4.5_0002151g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 2.7e-18 96.3 182 42.9
Gohir.D02G124700 Gossypium hirsutum HOM05D005097 ORTHO05D006186 3.5e-18 95.9 203 42.4
Thecc.02G349700 Theobroma cacao HOM05D005097 ORTHO05D006186 4.5e-18 95.5 219 40.2
Prupe.1G272000 Prunus persica HOM05D005097 ORTHO05D006186 5.9e-18 95.1 209 40.2
A08p27630 Brassica napus HOM05D005097 ORTHO05D006186 7.7e-18 94.7 187 39.6
BraA08t34700Z Brassica rapa HOM05D005097 ORTHO05D006186 7.7e-18 94.7 187 39.6
MSTRG.7812 Avicennia marina HOM05D005097 ORTHO05D006186 1.0e-17 94.4 209 40.2
Glyma.01G045200 Glycine max HOM05D005097 ORTHO05D006186 1.3e-17 94.0 192 39.6
Nitab4.5_0007561g0010 Nicotiana tabacum HOM05D005097 ORTHO05D006186 1.7e-17 93.6 183 42.6
Sed0019373 Sechium edule HOM05D005097 ORTHO05D006186 1.7e-17 93.6 185 41.6
Ca_04768_v3 Cicer arietinum L. HOM05D005097 ORTHO05D006186 2.2e-17 93.2 198 39.4
Ciclev10032896m.g Citrus clementina HOM05D005097 ORTHO05D006186 2.2e-17 93.2 193 40.9
Lj2g0000799 Lotus japonicus HOM05D005097 ORTHO05D006186 2.2e-17 93.2 193 38.3
Manes.05G099600 Manihot esculenta HOM05D005097 ORTHO05D006186 2.2e-17 93.2 192 40.6
Phvul.003G067200 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 2.9e-17 92.8 163 44.8
Sopen05g003200 Solanum pennellii HOM05D005097 ORTHO05D006186 2.9e-17 92.8 183 42.1
Peaxi162Scf00541g00067 Petunia axillaris HOM05D005097 ORTHO05D006186 5.0e-17 92.0 186 41.9
CSS0049826 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 6.5e-17 91.7 187 39.6
Thhalv10008900m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 6.5e-17 91.7 194 38.7
FAN17G3076 Fragaria x ananassa HOM05D005097 ORTHO05D006186 8.5e-17 91.3 181 39.8
BcaC07g39258 Brassica carinata HOM05D005097 ORTHO05D006186 1.5e-16 90.5 187 39.0
C08p22680 Brassica napus HOM05D005097 ORTHO05D006186 1.5e-16 90.5 187 39.0
BolC8t49906H Brassica oleracea HOM05D005097 ORTHO05D006186 1.5e-16 90.5 187 39.0
Cc11_g13240 Coffea canephora HOM05D005097 ORTHO05D006186 1.9e-16 90.1 189 40.7
Glyma.08G299000 Glycine max HOM05D005097 ORTHO05D006186 2.5e-16 89.7 197 40.6
Rhsim12G0061600 Rhododendron simsii HOM05D005097 ORTHO05D006186 2.5e-16 89.7 187 40.6
Solyc05g007240.1 Solanum lycopersicum HOM05D005097 ORTHO05D006186 2.5e-16 89.7 183 41.0
Aqoxy3G03339 Aquilegia oxysepala HOM05D005097 ORTHO05D006186 3.2e-16 89.4 134 41.0
CiPaw.05G214900 Carya illinoinensis HOM05D005097 ORTHO05D006186 5.5e-16 88.6 156 48.7
FAN07G0101 Fragaria x ananassa HOM05D005097 ORTHO05D006186 5.5e-16 88.6 181 38.7
PGSC0003DMG400023051 Solanum tuberosum HOM05D005097 ORTHO05D006186 5.5e-16 88.6 193 38.9
MSTRG.13412 Avicennia marina HOM05D005097 ORTHO05D006186 9.4e-16 87.8 193 36.3
MSTRG.689 Avicennia marina HOM05D005097 ORTHO05D006186 1.2e-15 87.4 200 42.0
Eucgr.B03425 Eucalyptus grandis HOM05D005097 ORTHO05D006186 1.2e-15 87.4 188 38.3
MD13G1074000 Malus domestica HOM05D005097 ORTHO05D006186 1.2e-15 87.4 139 44.6
Psat2g121760 Pisum sativum HOM05D005097 ORTHO05D006186 2.1e-15 86.7 201 38.8
VMungo0251G1975 Vigna mungo HOM05D005097 ORTHO05D006186 2.1e-15 86.7 187 40.6
CARHR025020 Cardamine hirsuta HOM05D005097 ORTHO05D006186 2.7e-15 86.3 182 35.7
Glyma.18G121900 Glycine max HOM05D005097 ORTHO05D006186 2.7e-15 86.3 190 40.5
Manes.01G187400 Manihot esculenta HOM05D005097 ORTHO05D006186 2.7e-15 86.3 209 36.8
Sp1g21860 Schrenkiella parvula HOM05D005097 ORTHO05D006186 2.7e-15 86.3 182 39.6
TAR622G0694 Trochodendron aralioides HOM05D005097 ORTHO05D006186 3.6e-15 85.9 175 41.1
BcaB03g14754 Brassica carinata HOM05D005097 ORTHO05D006186 4.7e-15 85.5 185 36.8
FAN22G0952 Fragaria x ananassa HOM05D005097 ORTHO05D006186 4.7e-15 85.5 175 37.1
AT1G26920 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 8.0e-15 84.7 130 43.8
BcaC05g26373 Brassica carinata HOM05D005097 ORTHO05D006186 8.0e-15 84.7 189 38.6
A02p16130 Brassica napus HOM05D005097 ORTHO05D006186 8.0e-15 84.7 181 37.6
A09p40330 Brassica napus HOM05D005097 ORTHO05D006186 8.0e-15 84.7 189 37.6
BolC5t31142H Brassica oleracea HOM05D005097 ORTHO05D006186 8.0e-15 84.7 189 38.6
BraA02t06672Z Brassica rapa HOM05D005097 ORTHO05D006186 8.0e-15 84.7 181 37.6
BraA09t39531Z Brassica rapa HOM05D005097 ORTHO05D006186 8.0e-15 84.7 189 37.6
MD16G1075200 Malus domestica HOM05D005097 ORTHO05D006186 8.0e-15 84.7 151 41.1
RcHm_v2.0_Chr4g0440081 Rosa chinensis HOM05D005097 ORTHO05D006186 8.0e-15 84.7 199 36.2
BcaC03g15115 Brassica carinata HOM05D005097 ORTHO05D006186 1.0e-14 84.3 187 38.0
BolC2t08749H Brassica oleracea HOM05D005097 ORTHO05D006186 1.0e-14 84.3 187 38.0
ECA234G2746 Erigeron canadensis HOM05D005097 ORTHO05D006186 1.4e-14 84.0 186 40.3
MBI05_g00383_MAGBIO Magnolia biondii HOM05D005097 ORTHO05D006186 1.4e-14 84.0 186 40.3
Nn4g23108 Nelumbo nucifera HOM05D005097 ORTHO05D006186 1.8e-14 83.6 190 37.4
SalBow2G0279 Salvia bowleyana HOM05D005097 ORTHO05D006186 1.8e-14 83.6 196 37.8
SalBow2G3468 Salvia bowleyana HOM05D005097 ORTHO05D006186 1.8e-14 83.6 196 37.8
DCAR_027404 Daucus carota HOM05D005097 ORTHO05D006186 2.3e-14 83.2 189 40.7
A07p36180 Brassica napus HOM05D005097 ORTHO05D006186 3.0e-14 82.8 185 37.8
BolC6t39429H Brassica oleracea HOM05D005097 ORTHO05D006186 3.0e-14 82.8 186 36.6
BraA07t31193Z Brassica rapa HOM05D005097 ORTHO05D006186 3.0e-14 82.8 185 37.8
Migut.E00105 Erythranthe guttata HOM05D005097 ORTHO05D006186 4.0e-14 82.4 203 37.4
Lsat_1_v5_gn_4_9981 Lactuca sativa HOM05D005097 ORTHO05D006186 4.0e-14 82.4 188 37.8
FAN12G0365 Fragaria x ananassa HOM05D005097 ORTHO05D006186 5.2e-14 82.0 176 37.5
Lsat_1_v5_gn_3_52761 Lactuca sativa HOM05D005097 ORTHO05D006186 5.2e-14 82.0 189 37.6
MSTRG.2351 Avicennia marina HOM05D005097 ORTHO05D006186 6.8e-14 81.6 176 40.3
BcaC08g46423 Brassica carinata HOM05D005097 ORTHO05D006186 6.8e-14 81.6 186 37.1
C06p43570 Brassica napus HOM05D005097 ORTHO05D006186 6.8e-14 81.6 186 37.1
Dinv16629 Davidia involucrata HOM05D001598 ORTHO05D002757 6.8e-14 81.6 139 42.4
Aa31LG7G8220 Aethionema arabicum HOM05D005097 ORTHO05D006186 8.8e-14 81.3 148 40.5
Oeu027980.1 Olea europaea HOM05D005097 ORTHO05D006186 8.8e-14 81.3 205 35.1
Phvul.002G088000 Phaseolus vulgaris HOM05D005097 ORTHO05D006186 8.8e-14 81.3 201 35.8
Migut.L01312 Erythranthe guttata HOM05D005097 ORTHO05D006186 1.5e-13 80.5 196 38.8
TAR371G0839 Trochodendron aralioides HOM05D005097 ORTHO05D006186 1.5e-13 80.5 188 37.8
Aa31LG4G11040 Aethionema arabicum HOM05D005097 ORTHO05D006186 2.6e-13 79.7 141 40.4
THA.LOC104822921 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 2.6e-13 79.7 153 39.2
PGR102G3149 Punica granatum HOM05D005097 ORTHO05D006186 3.4e-13 79.3 129 45.7
THA.LOC104822110 Tarenaya hassleriana HOM05D005097 ORTHO05D006186 3.4e-13 79.3 142 43.7
BcaB03g15503 Brassica carinata HOM05D005097 ORTHO05D006186 4.4e-13 79.0 188 37.8
C02p26790 Brassica napus HOM05D005097 ORTHO05D006186 4.4e-13 79.0 187 36.9
Oeu054897.1 Olea europaea HOM05D005097 ORTHO05D006186 4.4e-13 79.0 200 36.5
C06p36640 Brassica napus HOM05D005097 ORTHO05D006186 5.7e-13 78.6 187 38.0
Oeu013625.1 Olea europaea HOM05D005097 ORTHO05D006186 5.7e-13 78.6 197 36.5
BcaB05g24483 Brassica carinata HOM05D005097 ORTHO05D006186 7.5e-13 78.2 188 37.2
CARHR062830 Cardamine hirsuta HOM05D005097 ORTHO05D006186 9.8e-13 77.8 83 57.8
CiPaw.13G150200 Carya illinoinensis HOM05D005097 ORTHO05D006186 9.8e-13 77.8 77 62.3
SGA_v2.0_scaffold389G50580 Striga asiatica HOM05D005097 ORTHO05D006186 1.3e-12 77.4 185 35.7
VMungo1215G0414 Vigna mungo HOM05D005097 ORTHO05D006186 1.7e-12 77.0 207 34.8
A07p31380 Brassica napus HOM05D005097 ORTHO05D006186 2.8e-12 76.3 191 36.6
BraA07t30773Z Brassica rapa HOM05D005097 ORTHO05D006186 2.8e-12 76.3 191 36.6
Oeu045409.1 Olea europaea HOM05D005097 ORTHO05D006186 2.8e-12 76.3 204 34.8
MELO3C012082.2 Cucumis melo HOM05D005097 ORTHO05D006186 4.8e-12 75.5 197 35.0
BcaC08g45866 Brassica carinata HOM05D005097 ORTHO05D006186 6.3e-12 75.1 188 37.2
BolC6t38773H Brassica oleracea HOM05D005097 ORTHO05D006186 6.3e-12 75.1 188 37.2
AL2G28940 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 1.1e-11 74.3 158 38.6
AT1G69760 Arabidopsis thaliana HOM05D005097 ORTHO05D006186 1.1e-11 74.3 88 54.5
Sp5g24880 Schrenkiella parvula HOM05D005097 ORTHO05D006186 1.1e-11 74.3 184 37.0
Carub.0002s1644 Capsella rubella HOM05D005097 ORTHO05D006186 2.4e-11 73.2 87 54.0
ClCG05G024410 Citrullus lanatus HOM05D005097 ORTHO05D006186 3.1e-11 72.8 205 35.1
BcaB03g12015 Brassica carinata HOM05D005097 ORTHO05D006186 4.1e-11 72.4 127 43.3
Ah.02g131220 Amaranthus hybridus HOM05D005097 ORTHO05D006186 7.0e-11 71.6 177 38.4
EL10Ac6g13179 Beta vulgaris HOM05D005097 ORTHO05D006186 7.0e-11 71.6 182 35.2
Carub.0001s2406 Capsella rubella HOM05D005097 ORTHO05D006186 7.0e-11 71.6 183 32.8
PSO832G2020 Papaver somniferum HOM05D005097 ORTHO05D006186 7.0e-11 71.6 152 39.5
PGR119G1789 Punica granatum HOM05D005097 ORTHO05D006186 9.1e-11 71.2 81 51.9
Thhalv10019695m.g Eutrema salsugineum HOM05D005097 ORTHO05D006186 1.2e-10 70.9 183 39.3
Eucgr.G02514 Eucalyptus grandis HOM05D005097 ORTHO05D006186 1.6e-10 70.5 143 39.2
CSS0023945 Camellia sinensis var. sinensis HOM05D005097 ORTHO05D006186 2.0e-10 70.1 79 54.4
PSO063G6767 Papaver somniferum HOM05D005097 ORTHO05D006186 2.0e-10 70.1 161 38.5
Nn3g17188 Nelumbo nucifera HOM05D005097 ORTHO05D006186 4.5e-10 68.9 183 33.9
ATR0564G527 Amborella trichopoda HOM05D005097 ORTHO05D006186 7.7e-10 68.2 142 35.9
Actinidia07840 Actinidia chinensis HOM05D005097 ORTHO05D006186 1.3e-09 67.4 121 40.5
AL1G38630 Arabidopsis lyrata HOM05D005097 ORTHO05D006186 2.9e-09 66.2 77 53.2
Ah.03g135230 Amaranthus hybridus HOM05D005097 ORTHO05D006186 6.5e-09 65.1 192 36.5
SalBow8G4444 Salvia bowleyana HOM05D005097 ORTHO05D006186 6.5e-09 65.1 82 47.6
AUR62028807 Chenopodium quinoa HOM05D005097 ORTHO05D006186 4.2e-08 62.4 110 42.7
Eucgr.G02516 Eucalyptus grandis HOM05D005097 ORTHO05D006186 2.8e-07 59.7 168 36.3


User provided reference genes

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