Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007035 Daucus carota HOM05D003551 ORTHO05D004869 0.0e+00 1392.9 833 100.0
Dinv14754 Davidia involucrata HOM05D003551 ORTHO05D004869 6.5e-266 921.0 879 62.1
Hma1.2p1_0079F.1_g041260 Hydrangea macrophylla HOM05D003551 ORTHO05D004869 3.0e-263 912.1 824 64.4
Oeu028968.1 Olea europaea HOM05D003551 ORTHO05D004869 2.4e-252 875.9 832 62.6
CSS0025446 Camellia sinensis var. sinensis HOM05D003551 ORTHO05D004869 5.9e-251 871.3 851 65.6
Rhsim12G0038300 Rhododendron simsii HOM05D003551 ORTHO05D004869 6.5e-250 867.8 844 62.0
HanXRQChr08g0208471 Helianthus annuus HOM05D003551 ORTHO05D004869 3.2e-249 865.5 828 62.0
Solyc12g099890.2 Solanum lycopersicum HOM05D003551 ORTHO05D004869 2.3e-247 859.4 833 61.9
Eucgr.H02450 Eucalyptus grandis HOM05D003551 ORTHO05D004869 1.2e-246 857.1 841 61.6
Prupe.1G240500 Prunus persica HOM05D003551 ORTHO05D004869 1.8e-244 849.7 827 58.9
Ciclev10030726m.g Citrus clementina HOM05D003551 ORTHO05D004869 5.4e-244 848.2 832 62.7
ECA240G1955 Erigeron canadensis HOM05D003551 ORTHO05D004869 7.0e-244 847.8 829 60.3
Sopen12g034510 Solanum pennellii HOM05D003551 ORTHO05D004869 1.2e-243 847.0 835 61.3
QL05p021165 Quercus lobata HOM05D003551 ORTHO05D004869 1.6e-243 846.7 829 60.8
Oeu014152.4 Olea europaea HOM05D003551 ORTHO05D004869 5.0e-242 841.6 823 63.3
MD16G1105900 Malus domestica HOM05D003551 ORTHO05D004869 1.5e-241 840.1 835 57.1
MSTRG.7955 Avicennia marina HOM05D003551 ORTHO05D004869 1.9e-241 839.7 824 64.9
CiPaw.06G064600 Carya illinoinensis HOM05D003551 ORTHO05D004869 3.3e-241 839.0 828 59.3
ClCG03G002050 Citrullus lanatus HOM05D003551 ORTHO05D004869 3.0e-239 832.4 839 57.7
COL.COLO4_23531 Corchorus olitorius HOM05D003551 ORTHO05D004869 8.9e-239 830.9 823 57.7
Nitab4.5_0001290g0150 Nicotiana tabacum HOM05D003551 ORTHO05D004869 2.0e-238 829.7 851 56.8
Sabra08G0139300 Salix brachista HOM05D003551 ORTHO05D004869 2.0e-238 829.7 857 58.5
PGSC0003DMG400004723 Solanum tuberosum HOM05D003551 ORTHO05D004869 2.0e-238 829.7 834 59.1
Lsat_1_v5_gn_8_153700 Lactuca sativa HOM05D003551 ORTHO05D004869 4.4e-238 828.6 830 63.0
Cfa009260 Carpinus fangiana HOM05D003551 ORTHO05D004869 5.7e-238 828.2 828 63.9
Cc11_g16150 Coffea canephora HOM05D003551 ORTHO05D004869 1.3e-237 827.0 809 66.5
MELO3C022674.2 Cucumis melo HOM05D003551 ORTHO05D004869 4.9e-237 825.1 812 59.0
Cpa.g.sc33.80 Carica papaya HOM05D003551 ORTHO05D004869 3.2e-236 822.4 853 57.8
Lj6C816T3 Lonicera japonica HOM05D003551 ORTHO05D004869 4.1e-236 822.0 777 67.8
PGR119G0237 Punica granatum HOM05D003551 ORTHO05D004869 5.4e-236 821.6 841 60.5
Lalb_Chr23g0277731 Lupinus albus HOM05D003551 ORTHO05D004869 1.2e-235 820.5 833 59.8
CANSAT01G3182 Cannabis sativa HOM05D003551 ORTHO05D004869 1.6e-235 820.1 830 58.3
GSVIVG01000585001 Vitis vinifera HOM05D003551 ORTHO05D004869 7.8e-235 817.8 799 61.3
Migut.K00634 Erythranthe guttata HOM05D003551 ORTHO05D004869 1.0e-234 817.4 820 57.8
CsaV3_1G012700 Cucumis sativus L. HOM05D003551 ORTHO05D004869 1.3e-234 817.0 837 56.2
Manes.12G019500 Manihot esculenta HOM05D003551 ORTHO05D004869 1.7e-234 816.6 826 58.7
Gorai.008G288600 Gossypium raimondii HOM05D003551 ORTHO05D004869 3.0e-234 815.8 827 57.7
Nitab4.5_0004725g0020 Nicotiana tabacum HOM05D003551 ORTHO05D004869 1.5e-233 813.5 856 55.8
Aqoxy3G00657 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 5.6e-233 811.6 833 57.4
PSO478G3924 Papaver somniferum HOM05D003551 ORTHO05D004869 5.6e-233 811.6 846 56.7
Glyma.11G244500 Glycine max HOM05D003551 ORTHO05D004869 7.3e-233 811.2 843 57.7
Gohir.A12G268000 Gossypium hirsutum HOM05D003551 ORTHO05D004869 1.6e-232 810.1 837 57.1
Gohir.D12G268400 Gossypium hirsutum HOM05D003551 ORTHO05D004869 2.1e-232 809.7 827 57.8
Hund25033 Selenicereus undatus HOM05D003551 ORTHO05D004869 2.1e-232 809.7 825 61.5
Peaxi162Scf00062g00716 Petunia axillaris HOM05D003551 ORTHO05D004869 3.6e-232 808.9 832 57.2
TWI36G0896 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 6.2e-232 808.1 828 59.2
MELO3C026845.2 Cucumis melo HOM05D003551 ORTHO05D004869 1.0e-231 807.4 835 55.7
SalBow2G2049 Salvia bowleyana HOM05D003551 ORTHO05D004869 5.2e-231 805.1 837 57.5
VMungo0540G0742 Vigna mungo HOM05D003551 ORTHO05D004869 5.2e-231 805.1 838 58.7
PSO017G3678 Papaver somniferum HOM05D003551 ORTHO05D004869 6.8e-231 804.7 829 57.2
Phvul.001G256500 Phaseolus vulgaris HOM05D003551 ORTHO05D004869 1.2e-230 803.9 835 55.8
SGA_v2.0_scaffold92G28200 Striga asiatica HOM05D003551 ORTHO05D004869 1.2e-230 803.9 863 57.4
Aqoxy3G01365 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 1.5e-230 803.5 833 57.1
Potri.008G182900 Populus trichocarpa HOM05D003551 ORTHO05D004869 8.3e-229 797.7 824 57.8
Sed0023493 Sechium edule HOM05D003551 ORTHO05D004869 8.3e-229 797.7 816 57.8
Duzib268G0822 Durio zibethinus HOM05D003551 ORTHO05D004869 3.0e-226 789.3 827 58.0
EL10Ac6g14297 Beta vulgaris HOM05D003551 ORTHO05D004869 1.1e-225 787.3 827 60.1
Lj1g0001310 Lotus japonicus HOM05D003551 ORTHO05D004869 1.5e-225 786.9 834 55.9
FAN22G1040 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.9e-225 786.6 831 56.3
FAN12G2593 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.5e-225 786.2 831 56.3
CAN.G484.3 Capsicum annuum HOM05D003551 ORTHO05D004869 4.3e-225 785.4 823 59.1
Haze_12293 Corylus avellana HOM05D003551 ORTHO05D004869 4.3e-225 785.4 855 60.4
TWI75G1217 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 4.3e-225 785.4 827 58.0
PSO017G4772 Papaver somniferum HOM05D003551 ORTHO05D004869 7.3e-225 784.6 830 56.1
THA.LOC104809236 Tarenaya hassleriana HOM05D003551 ORTHO05D004869 7.3e-225 784.6 844 61.1
Ca_25128_v3 Cicer arietinum L. HOM05D003551 ORTHO05D004869 6.2e-224 781.6 822 58.0
RcHm_v2.0_Chr4g0432421 Rosa chinensis HOM05D003551 ORTHO05D004869 5.8e-222 775.0 830 55.9
Sc04g0005980 Simmondsia chinensis HOM05D003551 ORTHO05D004869 4.9e-221 771.9 823 57.5
PSO063G2135 Papaver somniferum HOM05D003551 ORTHO05D004869 4.1e-220 768.8 829 54.6
Lsat_1_v5_gn_8_153780 Lactuca sativa HOM05D003551 ORTHO05D004869 5.4e-220 768.5 828 56.4
vmacro01109 Vaccinium macrocarpon HOM05D003551 ORTHO05D004869 1.2e-219 767.3 836 60.8
Medtr3g086350 Medicago truncatula HOM05D003551 ORTHO05D004869 1.6e-219 766.9 833 55.2
arahy.Tifrunner.gnm1.ann1.A5BQBU Arachis hypogaea HOM05D003551 ORTHO05D004869 1.0e-218 764.2 825 54.3
arahy.Tifrunner.gnm1.ann1.MWLQ6N Arachis hypogaea HOM05D003551 ORTHO05D004869 1.9e-217 760.0 821 54.2
Psat2g160640 Pisum sativum HOM05D003551 ORTHO05D004869 2.8e-216 756.1 831 54.5
TPR.G5678 Trifolium pratense HOM05D003551 ORTHO05D004869 8.1e-216 754.6 819 57.8
Zm00001eb069620 Zea mays HOM05D003551 ORTHO05D004869 3.1e-215 752.7 857 52.5
Aa31LG1G1640 Aethionema arabicum HOM05D003551 ORTHO05D004869 1.3e-213 747.3 832 54.3
LjContig00312_ERROPOS870357g0004032 Lotus japonicus HOM05D003551 ORTHO05D004869 5.1e-210 735.3 827 54.3
AUR62014112 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.6e-208 730.3 826 53.5
FvH4_4g25230 Fragaria vesca HOM05D003551 ORTHO05D004869 8.9e-207 724.5 781 55.3
FAN17G0358 Fragaria x ananassa HOM05D003551 ORTHO05D004869 1.2e-206 724.2 884 51.7
TWI34G1512 Tripterygium wilfordii HOM05D003551 ORTHO05D004869 5.4e-204 715.3 813 53.9
HPP92_011125 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.7e-202 710.3 819 54.5
AL1G24840 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 5.6e-201 705.3 834 53.1
Thhalv10006828m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 7.3e-201 704.9 831 56.7
Sp1g11680 Schrenkiella parvula HOM05D003551 ORTHO05D004869 6.9e-199 698.4 852 54.7
Thecc.02G267000 Theobroma cacao HOM05D003551 ORTHO05D004869 1.5e-198 697.2 706 62.6
C08p46730 Brassica napus HOM05D003551 ORTHO05D004869 4.5e-198 695.7 839 52.4
AT1G13160 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 1.1e-196 691.0 845 54.1
Carub.0001s1289 Capsella rubella HOM05D003551 ORTHO05D004869 3.0e-194 682.9 844 55.8
Thhalv10005577m.g Eutrema salsugineum HOM05D003551 ORTHO05D004869 1.1e-193 681.0 836 55.7
BolC8t52212H Brassica oleracea HOM05D003551 ORTHO05D004869 7.4e-193 678.3 840 52.0
A09p63240 Brassica napus HOM05D003551 ORTHO05D004869 6.2e-192 675.2 834 53.1
BraA09t41676Z Brassica rapa HOM05D003551 ORTHO05D004869 4.0e-191 672.5 834 53.0
Carub.0003s0103 Capsella rubella HOM05D003551 ORTHO05D004869 5.3e-183 645.6 839 50.9
SalBow5G3625 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.0e-181 641.3 865 46.0
AUR62002805 Chenopodium quinoa HOM05D003551 ORTHO05D004869 4.9e-181 639.0 806 49.9
CARHR068650 Cardamine hirsuta HOM05D003551 ORTHO05D004869 4.3e-177 625.9 834 49.5
AL7G20520 Arabidopsis lyrata HOM05D003551 ORTHO05D004869 9.0e-175 618.2 939 45.0
Nn4g22519 Nelumbo nucifera HOM05D003551 ORTHO05D004869 5.5e-172 609.0 667 55.0
CDE02G2789 Ceratophyllum demersum HOM05D003551 ORTHO05D004869 3.7e-168 596.3 838 46.1
Aqoxy6G03052 Aquilegia oxysepala HOM05D003551 ORTHO05D004869 6.5e-165 585.5 831 46.7
arahy.Tifrunner.gnm1.ann1.006XS9 Arachis hypogaea HOM05D003551 ORTHO05D004869 1.2e-163 581.3 816 46.4
arahy.Tifrunner.gnm1.ann1.5TZZ24 Arachis hypogaea HOM05D003551 ORTHO05D004869 2.3e-162 577.0 817 46.5
arahy.Tifrunner.gnm1.ann1.X9TT4V Arachis hypogaea HOM05D003551 ORTHO05D004869 1.1e-161 574.7 817 46.4
Pp3c21_560 Physcomitrium patens HOM05D003551 ORTHO05D004869 5.5e-156 555.8 838 44.9
AT4G31520 Arabidopsis thaliana HOM05D003551 ORTHO05D004869 6.1e-155 552.4 777 45.7
Mapoly0084s0017 Marchantia polymorpha HOM05D003551 ORTHO05D004869 5.2e-154 549.3 836 43.7
unitig_22.g6420 Utricularia gibba HOM05D003551 ORTHO05D004869 3.7e-144 516.5 660 51.5
SalBow5G3177 Salvia bowleyana HOM05D003551 ORTHO05D004869 1.4e-143 514.6 877 39.9
ATR0824G183 Amborella trichopoda HOM05D003551 ORTHO05D004869 1.0e-141 508.4 439 62.2
Os04g0630000 Oryza sativa ssp. japonica HOM05D003551 ORTHO05D004869 6.5e-141 505.8 540 57.8
Pp3c21_561 Physcomitrium patens HOM05D003551 ORTHO05D004869 6.3e-128 462.6 711 45.0
TAR374G0642 Trochodendron aralioides HOM05D003551 ORTHO05D004869 8.3e-128 462.2 478 62.1
Actinidia01370 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.7e-125 454.5 477 62.9
SEGI_37161 Sequoiadendron giganteum HOM05D003551 ORTHO05D004869 2.5e-124 450.7 517 54.2
AagrBONN_evm.TU.Sc2ySwM_344.4679 Anthoceros agrestis HOM05D003551 ORTHO05D004869 1.8e-119 434.5 739 40.7
SMO197G0095 Selaginella moellendorffii HOM05D003551 ORTHO05D004869 2.8e-115 420.6 759 39.7
CBR_g23824 Chara braunii HOM05D003551 ORTHO05D004869 2.9e-112 410.6 878 38.3
AUR62020542 Chenopodium quinoa HOM05D003551 ORTHO05D004869 1.9e-108 397.9 860 38.5
TAR374G0468 Trochodendron aralioides HOM05D003551 ORTHO05D004869 3.3e-108 397.1 258 76.7
CARHR013530 Cardamine hirsuta HOM05D003551 ORTHO05D004869 1.2e-107 395.2 514 50.4
Atru.chr11.1973 Acer truncatum HOM05D003551 ORTHO05D004869 2.8e-107 394.0 443 56.4
Atru.chr11.1974 Acer truncatum HOM05D003551 ORTHO05D004869 3.2e-103 380.6 350 60.9
FAN07G2018 Fragaria x ananassa HOM05D003551 ORTHO05D004869 2.9e-96 357.5 248 72.6
QL04p087069 Quercus lobata HOM05D003551 ORTHO05D004869 3.8e-96 357.1 577 45.1
Medtr4g006000 Medicago truncatula HOM05D003551 ORTHO05D004869 1.9e-92 344.7 525 42.5
Cre06.g277050 Chlamydomonas reinhardtii HOM05D003551 ORTHO05D004869 1.4e-82 312.0 902 33.1
PRCOL_00005223 Prasinoderma coloniale HOM05D003551 ORTHO05D004869 4.0e-82 310.5 823 33.9
TPR.G18550 Trifolium pratense HOM05D003551 ORTHO05D004869 9.0e-82 309.3 568 35.2
MCO05G293 Micromonas commoda HOM05D003551 ORTHO05D004869 1.1e-79 302.4 803 33.6
Medtr4g005970 Medicago truncatula HOM05D003551 ORTHO05D004869 6.7e-77 293.1 444 41.9
AUR62015661 Chenopodium quinoa HOM05D003551 ORTHO05D004869 7.4e-76 289.7 666 40.1
SHI17843 Sapria himalayana HOM05D003551 ORTHO05D000023 1.8e-74 285.0 454 37.7
ATR0824G018 Amborella trichopoda HOM05D003551 ORTHO05D004869 3.4e-57 227.6 358 46.6
Actinidia08115 Actinidia chinensis HOM05D003551 ORTHO05D004869 2.1e-54 218.4 330 47.9
Actinidia01371 Actinidia chinensis HOM05D002413 ORTHO05D002638 1.3e-51 209.1 230 55.7
Sc04g0005970 Simmondsia chinensis HOM05D003551 ORTHO05D004869 1.1e-50 206.1 407 40.5
HPP92_027088 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.9e-50 203.4 414 40.8
Cfa023305 Carpinus fangiana HOM05D003551 ORTHO05D004869 1.8e-45 188.7 820 25.7
unitig_22.g6421 Utricularia gibba HOM05D003551 ORTHO05D004869 7.7e-41 173.3 138 62.3
HPP92_027649 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.2e-39 167.5 331 40.2
HPP92_028576 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.2e-39 167.5 313 43.5
Actinidia08116 Actinidia chinensis HOM05D003551 ORTHO05D004869 1.6e-33 149.1 140 62.1
BcaB04g19498 Brassica carinata HOM05D003551 ORTHO05D004869 4.5e-33 147.5 137 55.5
Zm00001eb279220 Zea mays HOM05D003551 ORTHO05D004869 4.7e-30 137.5 137 57.7
BcaB06g26385 Brassica carinata HOM05D003551 ORTHO05D016818 3.5e-25 121.3 94 60.6
BcaB07g33803 Brassica carinata HOM05D003551 ORTHO05D032399 7.7e-25 120.2 96 61.5
HPP92_006539 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.7e-25 120.2 142 52.1
Migut.C01140 Erythranthe guttata HOM05D003551 ORTHO05D004869 6.8e-21 107.1 219 38.4
HPP92_006872 Vanilla planifolia HOM05D003551 ORTHO05D016818 2.0e-20 105.5 85 60.0
HPP92_006576 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.4e-20 104.4 230 41.3
HPP92_006854 Vanilla planifolia HOM05D003551 ORTHO05D016818 7.5e-20 103.6 80 63.8
HPP92_027078 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.5e-20 103.6 302 32.8
arahy.Tifrunner.gnm1.ann1.LJ7GP5 Arachis hypogaea HOM05D003551 ORTHO05D004869 9.1e-18 96.7 102 54.9
HPP92_027653 Vanilla planifolia HOM05D003551 ORTHO05D004869 7.7e-17 93.6 315 30.5
HPP92_006538 Vanilla planifolia HOM05D003551 ORTHO05D004869 6.6e-16 90.5 80 61.2
HPP92_006855 Vanilla planifolia HOM05D003551 ORTHO05D004869 2.5e-15 88.6 266 32.7
HPP92_026938 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.2e-14 86.3 371 29.9
HPP92_028370 Vanilla planifolia HOM05D003551 ORTHO05D016818 8.0e-14 83.6 72 58.3
HPP92_028550 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.4e-13 82.8 159 40.3
HPP92_026598 Vanilla planifolia HOM05D003551 ORTHO05D004869 1.2e-12 79.7 80 52.5
Lsat_1_v5_gn_1_12340 Lactuca sativa HOM05D003551 ORTHO05D004869 5.7e-12 77.4 106 49.1
Lalb_Chr05g0228661 Lupinus albus HOM05D003551 ORTHO05D048508 6.3e-11 73.9 124 41.1
Lj6A816T56 Lonicera japonica HOM05D003551 ORTHO05D004869 8.3e-11 73.6 51 78.4
DCAR_030669 Daucus carota HOM05D001959 ORTHO05D006343 2.4e-10 72.0 38 86.8
HPP92_028371 Vanilla planifolia HOM05D003551 ORTHO05D004869 4.1e-10 71.2 235 34.9
HPP92_006540 Vanilla planifolia HOM05D003551 ORTHO05D016818 1.2e-09 69.7 65 53.8
DCAR_030665 Daucus carota HOM05D005171 ORTHO05D006343 2.0e-09 68.9 36 88.9
HPP92_006537 Vanilla planifolia HOM05D003551 ORTHO05D431158 5.9e-09 67.4 43 69.8
HPP92_027083 Vanilla planifolia HOM05D003551 ORTHO05D004869 3.9e-08 64.7 147 38.1
HPP92_027652 Vanilla planifolia HOM05D003551 ORTHO05D016818 8.6e-08 63.5 57 57.9
HPP92_027994 Vanilla planifolia HOM05D003551 ORTHO05D004869 5.6e-07 60.8 267 31.8
BcaB07g32274 Brassica carinata HOM05D003551 ORTHO05D004869 2.1e-06 58.9 62 45.2
HPP92_006873 Vanilla planifolia HOM05D000450 ORTHO05D002608 2.8e-06 58.5 198 36.9


User provided reference genes

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