Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007027 Daucus carota HOM05D007119 ORTHO05D009220 3.5e-269 931.0 466 100.0
Dinv14769 Davidia involucrata HOM05D007119 ORTHO05D009220 1.1e-185 653.7 447 70.5
CSS0010905 Camellia sinensis var. sinensis HOM05D007119 ORTHO05D009220 6.6e-183 644.4 447 68.9
Actinidia15126 Actinidia chinensis HOM05D007119 ORTHO05D009220 1.5e-182 643.3 447 69.8
CAN.G49.9 Capsicum annuum HOM05D007119 ORTHO05D009220 4.7e-181 638.3 450 67.6
Manes.13G018700 Manihot esculenta HOM05D007119 ORTHO05D009220 6.2e-181 637.9 447 67.3
CiPaw.05G175700 Carya illinoinensis HOM05D007119 ORTHO05D009220 8.0e-181 637.5 447 67.6
QL03p055873 Quercus lobata HOM05D007119 ORTHO05D009220 9.2e-177 624.0 446 66.8
GSVIVG01010292001 Vitis vinifera HOM05D007119 ORTHO05D009220 1.3e-175 620.2 446 66.6
Potri.008G181500 Populus trichocarpa HOM05D007119 ORTHO05D009220 1.1e-174 617.1 448 65.8
COL.COLO4_23551 Corchorus olitorius HOM05D007119 ORTHO05D009220 2.5e-174 615.9 447 64.7
Hma1.2p1_0079F.1_g041390 Hydrangea macrophylla HOM05D007119 ORTHO05D009220 3.3e-174 615.5 448 66.7
TAR629G0375 Trochodendron aralioides HOM05D007119 ORTHO05D009220 4.3e-174 615.1 447 67.6
Eucgr.H04699 Eucalyptus grandis HOM05D007119 ORTHO05D009220 9.5e-174 614.0 447 65.8
Lalb_Chr23g0277791 Lupinus albus HOM05D007119 ORTHO05D009220 1.1e-172 610.5 449 66.4
Ciclev10031444m.g Citrus clementina HOM05D007119 ORTHO05D009220 3.1e-172 609.0 446 64.6
Atru.chr11.2204 Acer truncatum HOM05D007119 ORTHO05D009220 8.9e-172 607.4 445 66.1
Thecc.02G269100 Theobroma cacao HOM05D007119 ORTHO05D009220 5.8e-171 604.7 449 64.1
Gohir.D12G151200 Gossypium hirsutum HOM05D007119 ORTHO05D009220 9.9e-171 604.0 447 64.0
Gorai.008G162700 Gossypium raimondii HOM05D007119 ORTHO05D009220 9.9e-171 604.0 447 64.0
HanXRQChr12g0372081 Helianthus annuus HOM05D007119 ORTHO05D009220 9.9e-171 604.0 447 65.3
vmacro16153 Vaccinium macrocarpon HOM05D007119 ORTHO05D009220 9.9e-171 604.0 497 61.4
RcHm_v2.0_Chr4g0432041 Rosa chinensis HOM05D007119 ORTHO05D009220 1.7e-170 603.2 447 65.3
Medtr3g086170 Medicago truncatula HOM05D007119 ORTHO05D009220 4.9e-170 601.7 444 64.4
Prupe.1G238900 Prunus persica HOM05D007119 ORTHO05D009220 1.1e-169 600.5 448 65.0
Cc11_g16270 Coffea canephora HOM05D007119 ORTHO05D009220 1.9e-169 599.7 447 65.3
FvH4_4g24980 Fragaria vesca HOM05D007119 ORTHO05D009220 1.9e-169 599.7 447 64.9
Glyma.11G245800 Glycine max HOM05D007119 ORTHO05D009220 4.1e-169 598.6 446 65.0
Glyma.18G011400 Glycine max HOM05D007119 ORTHO05D009220 5.4e-169 598.2 446 65.5
Lsat_1_v5_gn_8_150440 Lactuca sativa HOM05D007119 ORTHO05D009220 5.4e-169 598.2 447 64.7
CANSAT01G1522 Cannabis sativa HOM05D007119 ORTHO05D009220 9.2e-169 597.4 449 65.5
Migut.E00228 Erythranthe guttata HOM05D007119 ORTHO05D009220 1.2e-168 597.0 448 65.0
Haze_12309 Corylus avellana HOM05D007119 ORTHO05D009220 1.6e-168 596.7 518 58.1
Solyc05g014160.4 Solanum lycopersicum HOM05D007119 ORTHO05D009220 4.6e-168 595.1 420 67.6
Phvul.001G257500 Phaseolus vulgaris HOM05D007119 ORTHO05D009220 1.0e-167 594.0 446 65.5
TWI36G1063 Tripterygium wilfordii HOM05D007119 ORTHO05D009220 2.3e-167 592.8 450 63.3
arahy.Tifrunner.gnm1.ann1.3UY64B Arachis hypogaea HOM05D007119 ORTHO05D009220 5.1e-167 591.7 448 63.4
arahy.Tifrunner.gnm1.ann1.U7Q0BA Arachis hypogaea HOM05D007119 ORTHO05D009220 5.1e-167 591.7 448 63.4
MD13G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.5e-166 589.3 449 65.0
Duzib248G1022 Durio zibethinus HOM05D007119 ORTHO05D009220 3.3e-166 589.0 449 63.7
TPR.G14230 Trifolium pratense HOM05D007119 ORTHO05D009220 1.6e-165 586.6 460 62.0
THA.LOC104825682 Tarenaya hassleriana HOM05D007119 ORTHO05D009220 2.1e-165 586.3 446 62.8
MSTRG.13331 Avicennia marina HOM05D007119 ORTHO05D009220 2.4e-164 582.8 447 63.1
Lj6g0003042 Lotus japonicus HOM05D007119 ORTHO05D009220 3.1e-164 582.4 445 64.9
MD16G1107500 Malus domestica HOM05D007119 ORTHO05D009220 2.6e-163 579.3 448 64.1
Sed0010682 Sechium edule HOM05D007119 ORTHO05D009220 5.8e-163 578.2 449 62.4
TAR371G0886 Trochodendron aralioides HOM05D007119 ORTHO05D009220 7.6e-163 577.8 444 64.2
Gorai.005G173800 Gossypium raimondii HOM05D007119 ORTHO05D009220 2.9e-162 575.9 449 62.6
CsaV3_5G030670 Cucumis sativus L. HOM05D007119 ORTHO05D009220 6.4e-162 574.7 445 62.9
Carub.0005s0397 Capsella rubella HOM05D007119 ORTHO05D009220 8.4e-162 574.3 449 60.8
Sabra08G0138500 Salix brachista HOM05D007119 ORTHO05D009220 8.4e-162 574.3 545 54.1
VMungo1383G3713 Vigna mungo HOM05D007119 ORTHO05D009220 2.1e-160 569.7 446 62.6
ECA233G0282 Erigeron canadensis HOM05D007119 ORTHO05D009220 3.5e-160 568.9 428 64.7
SalBow8G1200 Salvia bowleyana HOM05D007119 ORTHO05D009220 3.5e-160 568.9 422 66.1
AT3G26090 Arabidopsis thaliana HOM05D007119 ORTHO05D009220 1.3e-159 567.0 449 59.9
Sc14g0008910 Simmondsia chinensis HOM05D007119 ORTHO05D009220 1.3e-159 567.0 448 62.5
AL5G14790 Arabidopsis lyrata HOM05D007119 ORTHO05D009220 2.3e-159 566.2 453 60.0
Gohir.A03G131100 Gossypium hirsutum HOM05D007119 ORTHO05D009220 6.6e-159 564.7 449 61.5
Nn3g16605 Nelumbo nucifera HOM05D007119 ORTHO05D009220 1.1e-158 563.9 448 60.9
Aa31LG2G6270 Aethionema arabicum HOM05D007119 ORTHO05D009220 1.5e-158 563.5 448 59.2
BcaC06g31092 Brassica carinata HOM05D007119 ORTHO05D009220 9.6e-158 560.8 448 60.0
Gohir.A12G146600 Gossypium hirsutum HOM05D007119 ORTHO05D009220 1.3e-157 560.5 451 60.3
A06p42260 Brassica napus HOM05D007119 ORTHO05D009220 3.6e-157 558.9 455 59.1
BraA06t27142Z Brassica rapa HOM05D007119 ORTHO05D009220 3.6e-157 558.9 455 59.1
BcaC06g33928 Brassica carinata HOM05D007119 ORTHO05D009220 2.4e-156 556.2 446 59.9
CARHR147090 Cardamine hirsuta HOM05D007119 ORTHO05D009220 6.9e-156 554.7 449 59.7
Hund25421 Selenicereus undatus HOM05D007119 ORTHO05D009220 9.0e-156 554.3 456 60.1
C07p35060 Brassica napus HOM05D007119 ORTHO05D009220 1.2e-155 553.9 458 58.7
BolC7t44037H Brassica oleracea HOM05D007119 ORTHO05D009220 2.6e-155 552.7 458 58.5
Sp2g15290 Schrenkiella parvula HOM05D007119 ORTHO05D009220 2.6e-155 552.7 449 59.0
BcaC04g21404 Brassica carinata HOM05D007119 ORTHO05D009220 2.9e-154 549.3 449 59.0
BolC9t56067H Brassica oleracea HOM05D007119 ORTHO05D009220 2.9e-154 549.3 449 59.0
BraA09t38102Z Brassica rapa HOM05D007119 ORTHO05D009220 2.9e-154 549.3 449 58.8
A09p25150 Brassica napus HOM05D007119 ORTHO05D009220 3.8e-154 548.9 449 59.0
BcaB07g30623 Brassica carinata HOM05D007119 ORTHO05D009220 1.4e-153 547.0 448 58.9
Aqoxy3G01324 Aquilegia oxysepala HOM05D007119 ORTHO05D009220 5.4e-153 545.0 449 58.6
Lj6C818G13 Lonicera japonica HOM05D007119 ORTHO05D009220 1.2e-152 543.9 422 65.6
PSO017G0770 Papaver somniferum HOM05D007119 ORTHO05D009220 1.6e-152 543.5 447 60.2
C09p32210 Brassica napus HOM05D007119 ORTHO05D009220 2.1e-152 543.1 449 57.9
Ah.03g133650 Amaranthus hybridus HOM05D007119 ORTHO05D009220 1.0e-151 540.8 444 57.9
Peaxi162Scf00128g00648 Petunia axillaris HOM05D007119 ORTHO05D009220 1.1e-150 537.3 374 67.6
AUR62024193 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.9e-150 536.6 462 57.4
ATR0824G105 Amborella trichopoda HOM05D007119 ORTHO05D009220 7.3e-150 534.6 447 58.2
FAN22G2246 Fragaria x ananassa HOM05D007119 ORTHO05D009220 2.4e-148 529.6 433 61.9
Psat5g093400 Pisum sativum HOM05D007119 ORTHO05D009220 8.7e-143 511.1 383 64.2
Gohir.D02G154800 Gossypium hirsutum HOM05D007119 ORTHO05D009220 2.5e-142 509.6 396 63.1
SGA_v2.0_scaffold87G27113 Striga asiatica HOM05D007119 ORTHO05D009220 1.1e-140 504.2 395 63.8
EL10As2g23223 Beta vulgaris HOM05D007119 ORTHO05D009220 2.6e-139 499.6 453 57.4
Nn4g22487 Nelumbo nucifera HOM05D007119 ORTHO05D009220 3.8e-138 495.7 389 62.7
ClCG05G026170 Citrullus lanatus HOM05D007119 ORTHO05D009220 2.5e-137 493.0 455 56.0
Thhalv10004169m.g Eutrema salsugineum HOM05D007119 ORTHO05D009220 7.1e-137 491.5 383 61.1
Nitab4.5_0002688g0040 Nicotiana tabacum HOM05D007119 ORTHO05D009220 8.4e-130 468.0 335 67.2
BcaC06g31096 Brassica carinata HOM05D007119 ORTHO05D009220 7.2e-129 464.9 443 53.7
Sopen05g009180 Solanum pennellii HOM05D007119 ORTHO05D009220 5.7e-118 428.7 305 67.2
Oeu012665.1 Olea europaea HOM05D007119 ORTHO05D009220 7.4e-118 428.3 308 66.2
MELO3C011902.2 Cucumis melo HOM05D007119 ORTHO05D009220 4.1e-116 422.5 371 58.5
Ca_16499_v3 Cicer arietinum L. HOM05D007119 ORTHO05D009220 2.4e-108 396.7 295 65.4
SEGI_05094 Sequoiadendron giganteum HOM05D007119 ORTHO05D009220 1.5e-105 387.5 397 48.1
AUR62005541 Chenopodium quinoa HOM05D007119 ORTHO05D009220 1.5e-94 350.9 310 56.5
MBI08_g43995_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 4.5e-83 312.8 248 63.7
MBI08_g44099_MAGBIO Magnolia biondii HOM05D007119 ORTHO05D009220 4.5e-83 312.8 248 63.7
AagrBONN_evm.TU.Sc2ySwM_117.1226 Anthoceros agrestis HOM05D001585 ORTHO05D001677 7.5e-78 295.4 459 38.3
SMO165G0024 Selaginella moellendorffii HOM05D007119 ORTHO05D009220 2.4e-68 263.8 364 40.9
HanXRQChr08g0208021 Helianthus annuus HOM05D007119 ORTHO05D009220 3.4e-62 243.4 215 60.5
PGSC0003DMG401010743 Solanum tuberosum HOM05D007119 ORTHO05D009220 4.4e-62 243.0 184 65.8
Nitab4.5_0000041g0220 Nicotiana tabacum HOM05D007119 ORTHO05D009220 5.8e-62 242.7 209 58.9
CANSAT25G1465 Cannabis sativa HOM05D007119 ORTHO05D009220 8.4e-37 159.1 105 71.4
HanXRQChr08g0208031 Helianthus annuus HOM05D007119 ORTHO05D009220 1.8e-31 141.4 90 68.9
Nitab4.5_0002688g0050 Nicotiana tabacum HOM05D007119 ORTHO05D036862 3.0e-18 97.4 67 68.7
Nitab4.5_0000041g0230 Nicotiana tabacum HOM05D007119 ORTHO05D036862 7.4e-17 92.8 67 64.2
Peaxi162Scf00128g00647 Petunia axillaris HOM05D007119 ORTHO05D036862 1.7e-13 81.6 79 51.9
Nitab4.5_0004050g0040 Nicotiana tabacum HOM05D007119 ORTHO05D284832 1.5e-06 58.5 31 74.2
Glyma.16G096400 Glycine max HOM05D001723 ORTHO05D001706 2.6e-06 57.8 37 73.0


User provided reference genes

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