Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_007015 Daucus carota HOM05D006725 ORTHO05D008223 2.0e-104 382.5 196 100.0
Dinv14799 Davidia involucrata HOM05D006725 ORTHO05D008223 1.6e-45 186.8 197 52.3
Phvul.001G259500 Phaseolus vulgaris HOM05D006725 ORTHO05D008223 2.3e-44 183.0 149 61.7
Ca_16483_v3 Cicer arietinum L. HOM05D006725 ORTHO05D008223 1.1e-43 180.6 202 52.0
TAR374G1568 Trochodendron aralioides HOM05D006725 ORTHO05D008223 3.3e-43 179.1 149 60.4
Lsat_1_v5_gn_4_2821 Lactuca sativa HOM05D006725 ORTHO05D008223 5.6e-43 178.3 153 60.8
Nn4g22406 Nelumbo nucifera HOM05D006725 ORTHO05D008223 5.6e-43 178.3 143 62.9
Glyma.11G248100 Glycine max HOM05D006725 ORTHO05D008223 7.3e-43 177.9 149 61.7
Potri.008G105700 Populus trichocarpa HOM05D006725 ORTHO05D008223 2.8e-42 176.0 143 58.7
Peaxi162Scf00128g00835 Petunia axillaris HOM05D006725 ORTHO05D008223 3.6e-42 175.6 148 63.5
Prupe.1G233300 Prunus persica HOM05D006725 ORTHO05D008223 3.6e-42 175.6 148 60.1
Glyma.18G009100 Glycine max HOM05D006725 ORTHO05D008223 6.2e-42 174.9 141 63.8
MD13G1112100 Malus domestica HOM05D006725 ORTHO05D008223 6.2e-42 174.9 145 60.7
Actinidia08088 Actinidia chinensis HOM05D006725 ORTHO05D008223 8.1e-42 174.5 194 56.2
MD16G1111700 Malus domestica HOM05D006725 ORTHO05D008223 8.1e-42 174.5 145 60.7
TWI18G0344 Tripterygium wilfordii HOM05D006725 ORTHO05D008223 1.4e-41 173.7 166 54.8
CSS0023056 Camellia sinensis var. sinensis HOM05D006725 ORTHO05D008223 1.8e-41 173.3 142 63.4
arahy.Tifrunner.gnm1.ann1.245RAI Arachis hypogaea HOM05D006725 ORTHO05D008223 2.4e-41 172.9 145 60.7
Aqoxy5G03519 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 3.1e-41 172.6 142 61.3
HanXRQChr17g0569291 Helianthus annuus HOM05D006725 ORTHO05D008223 3.1e-41 172.6 190 49.5
Lj3g0011418 Lotus japonicus HOM05D006725 ORTHO05D008223 3.1e-41 172.6 175 52.0
Sopen05g009780 Solanum pennellii HOM05D006725 ORTHO05D008223 3.1e-41 172.6 182 54.4
ClCG08G017310 Citrullus lanatus HOM05D006725 ORTHO05D008223 4.0e-41 172.2 177 50.3
Medtr3g085720 Medicago truncatula HOM05D006725 ORTHO05D008223 5.3e-41 171.8 146 59.6
TPR.G22435 Trifolium pratense HOM05D006725 ORTHO05D008223 6.9e-41 171.4 153 60.1
RcHm_v2.0_Chr4g0431131 Rosa chinensis HOM05D006725 ORTHO05D008223 9.0e-41 171.0 149 57.0
Solyc05g014650.2 Solanum lycopersicum HOM05D006725 ORTHO05D008223 2.0e-40 169.9 179 53.6
HPP92_021374 Vanilla planifolia HOM05D006725 ORTHO05D008223 2.6e-40 169.5 153 55.6
FAN12G1259 Fragaria x ananassa HOM05D006725 ORTHO05D008223 4.5e-40 168.7 165 55.8
CiPaw.05G115200 Carya illinoinensis HOM05D006725 ORTHO05D008223 5.8e-40 168.3 148 58.1
CsaV3_2G025320 Cucumis sativus L. HOM05D006725 ORTHO05D008223 5.8e-40 168.3 174 50.0
CANSAT56G1091 Cannabis sativa HOM05D006725 ORTHO05D008223 9.9e-40 167.5 146 59.6
PSO063G2169 Papaver somniferum HOM05D006725 ORTHO05D008223 9.9e-40 167.5 199 50.8
Duzib248G0208 Durio zibethinus HOM05D006725 ORTHO05D008223 1.3e-39 167.2 157 54.1
QL03p054759 Quercus lobata HOM05D006725 ORTHO05D008223 1.3e-39 167.2 154 55.2
COL.COLO4_23620 Corchorus olitorius HOM05D006725 ORTHO05D008223 2.2e-39 166.4 151 57.0
Migut.K00702 Erythranthe guttata HOM05D006725 ORTHO05D008223 2.2e-39 166.4 161 55.3
THA.LOC104825521 Tarenaya hassleriana HOM05D006725 ORTHO05D008223 2.2e-39 166.4 202 47.5
Cfa009314 Carpinus fangiana HOM05D006725 ORTHO05D008223 2.9e-39 166.0 161 54.7
Sed0015494 Sechium edule HOM05D006725 ORTHO05D008223 2.9e-39 166.0 170 51.8
Thecc.02G274200 Theobroma cacao HOM05D006725 ORTHO05D008223 3.8e-39 165.6 157 54.1
unitig_749.g13304 Utricularia gibba HOM05D006725 ORTHO05D008223 3.8e-39 165.6 152 56.6
Ciclev10032688m.g Citrus clementina HOM05D006725 ORTHO05D008223 4.9e-39 165.2 199 49.2
PSO782G3390 Papaver somniferum HOM05D006725 ORTHO05D008223 4.9e-39 165.2 160 53.8
PGR102G0799 Punica granatum HOM05D006725 ORTHO05D008223 4.9e-39 165.2 159 55.3
Manes.13G015700 Manihot esculenta HOM05D006725 ORTHO05D008223 6.4e-39 164.9 120 63.3
Gohir.A03G128700 Gossypium hirsutum HOM05D006725 ORTHO05D008223 8.4e-39 164.5 150 56.0
AL2G26280 Arabidopsis lyrata HOM05D006725 ORTHO05D008223 1.1e-38 164.1 194 46.9
Gorai.005G171500 Gossypium raimondii HOM05D006725 ORTHO05D008223 1.4e-38 163.7 140 60.7
FAN22G0294 Fragaria x ananassa HOM05D006725 ORTHO05D008223 1.9e-38 163.3 163 54.6
Gohir.D02G152500 Gossypium hirsutum HOM05D006725 ORTHO05D008223 2.4e-38 162.9 150 56.7
EL10Ac6g13437 Beta vulgaris HOM05D006725 ORTHO05D008223 3.2e-38 162.5 191 47.6
Rhsim12G0035000 Rhododendron simsii HOM05D006725 ORTHO05D008223 3.2e-38 162.5 234 46.2
SalBow2G1482 Salvia bowleyana HOM05D006725 ORTHO05D008223 7.1e-38 161.4 168 53.6
Lj3A1064T102 Lonicera japonica HOM05D006725 ORTHO05D008223 1.6e-37 160.2 139 61.2
Hund06064 Selenicereus undatus HOM05D006725 ORTHO05D008223 1.6e-37 160.2 149 59.7
Os12g0241100 Oryza sativa ssp. japonica HOM05D006725 ORTHO05D008223 2.1e-37 159.8 156 51.9
BcaB03g15182 Brassica carinata HOM05D006725 ORTHO05D008223 2.7e-37 159.5 196 50.0
Carub.0002s1395 Capsella rubella HOM05D006725 ORTHO05D008223 2.7e-37 159.5 144 56.2
AT1G67620 Arabidopsis thaliana HOM05D006725 ORTHO05D008223 6.0e-37 158.3 144 56.9
Lalb_Chr11g0075681 Lupinus albus HOM05D006725 ORTHO05D008223 6.0e-37 158.3 149 57.7
Atru.chr11.2245 Acer truncatum HOM05D006725 ORTHO05D008223 7.9e-37 157.9 202 47.5
CARHR060190 Cardamine hirsuta HOM05D006725 ORTHO05D008223 7.9e-37 157.9 192 46.9
Atru.chr11.2260 Acer truncatum HOM05D006725 ORTHO05D008223 1.3e-36 157.1 144 58.3
arahy.Tifrunner.gnm1.ann1.ZVR9LL Arachis hypogaea HOM05D006725 ORTHO05D008223 2.3e-36 156.4 119 64.7
Haze_12368 Corylus avellana HOM05D006725 ORTHO05D008223 2.3e-36 156.4 185 48.1
AUR62005570 Chenopodium quinoa HOM05D006725 ORTHO05D008223 3.9e-36 155.6 204 45.1
Aqoxy5G03514 Aquilegia oxysepala HOM05D006725 ORTHO05D008223 6.7e-36 154.8 118 62.7
vmacro01086 Vaccinium macrocarpon HOM05D006725 ORTHO05D008223 6.7e-36 154.8 132 58.3
Zm00001eb133570 Zea mays HOM05D006725 ORTHO05D008223 6.7e-36 154.8 148 52.0
Eucgr.B03461 Eucalyptus grandis HOM05D006725 ORTHO05D008223 8.7e-36 154.5 162 51.9
BraA07t31040Z Brassica rapa HOM05D006725 ORTHO05D008223 1.1e-35 154.1 159 54.1
BraA07t31044Z Brassica rapa HOM05D006725 ORTHO05D008223 1.1e-35 154.1 159 54.1
SGA_v2.0_scaffold46G17392 Striga asiatica HOM05D006725 ORTHO05D008223 1.1e-35 154.1 157 48.4
A07p34140 Brassica napus HOM05D006725 ORTHO05D008223 1.5e-35 153.7 154 54.5
Thhalv10019173m.g Eutrema salsugineum HOM05D006725 ORTHO05D008223 4.3e-35 152.1 149 53.0
Psat5g094640 Pisum sativum HOM05D006725 ORTHO05D008223 4.3e-35 152.1 126 58.7
BcaC08g46171 Brassica carinata HOM05D006725 ORTHO05D008223 9.6e-35 151.0 192 45.8
C06p42630 Brassica napus HOM05D006725 ORTHO05D008223 9.6e-35 151.0 192 45.8
Nitab4.5_0000581g0080 Nicotiana tabacum HOM05D006725 ORTHO05D008223 1.3e-34 150.6 185 50.3
BolC6t39176H Brassica oleracea HOM05D006725 ORTHO05D008223 1.6e-34 150.2 198 45.5
ATR0609G130 Amborella trichopoda HOM05D006725 ORTHO05D008223 1.8e-33 146.7 118 53.4
GSVIVG01010346001 Vitis vinifera HOM05D006725 ORTHO05D008223 1.5e-32 143.7 106 61.3
Aa31LG4G12010 Aethionema arabicum HOM05D006725 ORTHO05D008223 4.9e-31 138.7 119 58.0
Sabra08G0079700 Salix brachista HOM05D006725 ORTHO05D008223 2.5e-30 136.3 151 47.7
CDE09G0294 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 1.2e-29 134.0 106 58.5
Sc04g0004650 Simmondsia chinensis HOM05D006725 ORTHO05D008223 1.9e-27 126.7 120 56.7
MELO3C010728.2 Cucumis melo HOM05D006725 ORTHO05D008223 1.5e-24 117.1 116 52.6
Cc11_g16590 Coffea canephora HOM05D006725 ORTHO05D008223 8.4e-23 111.3 92 58.7
Nitab4.5_0000240g0060 Nicotiana tabacum HOM05D006725 ORTHO05D008223 6.0e-21 105.1 93 58.1
ECA234G0356 Erigeron canadensis HOM05D006725 ORTHO05D008223 7.9e-21 104.8 112 50.0
AUR62024160 Chenopodium quinoa HOM05D006725 ORTHO05D008223 3.9e-20 102.4 143 41.3
SalBow3G4645 Salvia bowleyana HOM05D006725 ORTHO05D008223 1.1e-19 100.9 85 60.0
RcHm_v2.0_Chr1g0343341 Rosa chinensis HOM05D006725 ORTHO05D008223 1.6e-18 97.1 72 59.7
VMungo1383G0611 Vigna mungo HOM05D006725 ORTHO05D008223 2.4e-17 93.2 154 40.9
arahy.Tifrunner.gnm1.ann1.GPZA99 Arachis hypogaea HOM05D006725 ORTHO05D008223 1.5e-16 90.5 103 48.5
CAN.G1081.12 Capsicum annuum HOM05D006725 ORTHO05D008223 3.4e-16 89.4 66 59.1
CAN.G3094.1 Capsicum annuum HOM05D006725 ORTHO05D008223 3.4e-16 89.4 66 59.1
MBI08_g41741_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 4.5e-16 89.0 71 53.5
RcHm_v2.0_Chr7g0198741 Rosa chinensis HOM05D006725 ORTHO05D008223 7.7e-16 88.2 76 57.9
Pp3c8_14070 Physcomitrium patens HOM05D006725 ORTHO05D008223 1.3e-15 87.4 129 34.1
FvH4_4g24330 Fragaria vesca HOM05D006725 ORTHO05D008223 8.5e-15 84.7 64 68.8
Oeu041686.1 Olea europaea HOM05D006725 ORTHO05D008223 1.1e-14 84.3 60 71.7
SalBow1G8122 Salvia bowleyana HOM05D004872 ORTHO05D006050 1.1e-14 84.3 65 60.0
CBR_g17596 Chara braunii HOM05D006725 ORTHO05D008223 1.2e-13 80.9 108 38.0
SMO141G0262 Selaginella moellendorffii HOM05D006725 ORTHO05D008223 4.6e-13 79.0 105 36.2
Hma1.2p1_0167F.1_g073800 Hydrangea macrophylla HOM05D006725 ORTHO05D008223 6.1e-13 78.6 51 68.6
CDE02G2623 Ceratophyllum demersum HOM05D006725 ORTHO05D008223 1.8e-12 77.0 54 70.4
CAN.G1081.11 Capsicum annuum HOM05D006725 ORTHO05D008223 5.1e-12 75.5 57 68.4
CAN.G3094.2 Capsicum annuum HOM05D006725 ORTHO05D008223 5.1e-12 75.5 57 68.4
Atru.chr7.1050 Acer truncatum HOM05D006725 ORTHO05D008223 6.7e-12 75.1 73 54.8
Actinidia30676 Actinidia chinensis HOM05D006725 ORTHO05D008223 1.3e-10 70.9 66 54.5
RcHm_v2.0_Chr1g0366581 Rosa chinensis HOM05D006725 ORTHO05D008223 4.8e-10 68.9 52 61.5
RcHm_v2.0_Chr3g0456071 Rosa chinensis HOM05D006725 ORTHO05D008223 8.2e-10 68.2 51 60.8
RcHm_v2.0_Chr7g0183971 Rosa chinensis HOM05D006725 ORTHO05D008223 1.1e-09 67.8 52 59.6
MCO03G004 Micromonas commoda HOM05D006725 ORTHO05D008223 3.1e-09 66.2 132 31.8
MBI08_g41742_MAGBIO Magnolia biondii HOM05D006725 ORTHO05D008223 1.3e-07 60.8 64 51.6
Cpa.g.sc351.2 Carica papaya HOM05D006725 ORTHO05D008223 6.5e-07 58.5 126 31.0
SpUn0282_0010 Schrenkiella parvula HOM05D006725 ORTHO05D008223 9.4e-06 54.7 55 49.1


User provided reference genes

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