Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006996 Daucus carota HOM05D007298 ORTHO05D009226 7.0e-196 687.2 366 100.0
DCAR_006994 Daucus carota HOM05D007298 ORTHO05D009226 2.2e-189 665.6 354 100.0
Hma1.2p1_1436F.1_g283160 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 1.2e-41 174.9 261 48.7
Nn2g15906 Nelumbo nucifera HOM05D007298 ORTHO05D009226 4.4e-41 172.9 331 40.8
Cc11_g17470 Coffea canephora HOM05D007298 ORTHO05D009226 7.5e-41 172.2 365 41.6
CiPaw.13G179900 Carya illinoinensis HOM05D007298 ORTHO05D009226 1.4e-39 167.9 258 45.0
Nitab4.5_0007554g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.4e-39 167.9 365 36.4
Cfa009528 Carpinus fangiana HOM05D007298 ORTHO05D009226 1.2e-38 164.9 308 38.3
COL.COLO4_37432 Corchorus olitorius HOM05D007298 ORTHO05D009226 2.0e-38 164.1 368 38.3
CSS0015764 Camellia sinensis var. sinensis HOM05D007298 ORTHO05D009226 4.6e-38 162.9 261 43.3
Nn7g35796 Nelumbo nucifera HOM05D007298 ORTHO05D009226 1.7e-37 161.0 300 43.0
Actinidia30606 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.3e-37 160.6 261 43.7
Duzib205G1649 Durio zibethinus HOM05D007298 ORTHO05D009226 2.3e-37 160.6 369 37.7
Thecc.03G118900 Theobroma cacao HOM05D007298 ORTHO05D009226 3.0e-37 160.2 259 43.6
vmacro16084 Vaccinium macrocarpon HOM05D007298 ORTHO05D009226 8.6e-37 158.7 257 44.4
Ciclev10017525m.g Citrus clementina HOM05D007298 ORTHO05D009226 1.1e-36 158.3 260 44.6
TAR623G1587 Trochodendron aralioides HOM05D007298 ORTHO05D009226 1.5e-36 157.9 264 44.7
Nitab4.5_0008442g0010 Nicotiana tabacum HOM05D007298 ORTHO05D009226 2.5e-36 157.1 364 35.7
Aqoxy2G04036 Aquilegia oxysepala HOM05D007298 ORTHO05D009226 7.3e-36 155.6 283 40.6
PGR119G1464 Punica granatum HOM05D007298 ORTHO05D009226 1.6e-35 154.5 322 39.4
Lj4g0005920 Lotus japonicus HOM05D007298 ORTHO05D009226 3.6e-35 153.3 330 37.3
MBI13_g02430_MAGBIO Magnolia biondii HOM05D007298 ORTHO05D009226 4.7e-35 152.9 273 44.7
MD11G1000700 Malus domestica HOM05D007298 ORTHO05D009226 4.7e-35 152.9 318 37.7
Peaxi162Scf00128g01770 Petunia axillaris HOM05D007298 ORTHO05D009226 4.7e-35 152.9 356 36.0
FvH4_3g45980 Fragaria vesca HOM05D007298 ORTHO05D009226 1.8e-34 151.0 272 39.3
Gohir.D12G189800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 1.8e-34 151.0 265 40.8
Gohir.A12G186800 Gossypium hirsutum HOM05D007298 ORTHO05D009226 2.3e-34 150.6 265 40.8
Sabra01G0000900 Salix brachista HOM05D007298 ORTHO05D009226 2.3e-34 150.6 260 43.5
RcHm_v2.0_Chr5g0084091 Rosa chinensis HOM05D007298 ORTHO05D009226 3.1e-34 150.2 289 39.1
arahy.Tifrunner.gnm1.ann1.IS7ZQD Arachis hypogaea HOM05D002349 ORTHO05D002464 4.0e-34 149.8 257 41.6
arahy.Tifrunner.gnm1.ann1.MB6W4F Arachis hypogaea HOM05D002349 ORTHO05D002464 4.0e-34 149.8 257 41.6
Glyma.07G199400 Glycine max HOM05D007298 ORTHO05D009226 4.0e-34 149.8 259 42.1
Lalb_Chr16g0383911 Lupinus albus HOM05D007298 ORTHO05D009226 4.0e-34 149.8 283 40.6
Rhsim12G0097800 Rhododendron simsii HOM05D007298 ORTHO05D009226 4.0e-34 149.8 248 44.8
TPR.G16338 Trifolium pratense HOM05D007298 ORTHO05D009226 8.9e-34 148.7 259 42.1
CsaV3_1G001220 Cucumis sativus L. HOM05D007298 ORTHO05D009226 1.2e-33 148.3 323 38.1
Gorai.008G203600 Gossypium raimondii HOM05D007298 ORTHO05D009226 1.2e-33 148.3 265 40.0
Migut.K01030 Erythranthe guttata HOM05D007298 ORTHO05D009226 1.5e-33 147.9 298 40.3
FAN16G2589 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.5e-33 147.9 272 39.0
AUR62008624 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.6e-33 147.1 312 36.2
Phvul.002G230700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 2.6e-33 147.1 254 41.7
Sed0017427 Sechium edule HOM05D007298 ORTHO05D009226 2.6e-33 147.1 321 38.3
ClCG06G017280 Citrullus lanatus HOM05D007298 ORTHO05D009226 3.4e-33 146.7 322 37.0
Ca_18576_v3 Cicer arietinum L. HOM05D007298 ORTHO05D009226 5.8e-33 146.0 259 39.8
PGSC0003DMG400025413 Solanum tuberosum HOM05D007298 ORTHO05D009226 5.8e-33 146.0 255 43.1
VMungo0251G1522 Vigna mungo HOM05D007298 ORTHO05D009226 5.8e-33 146.0 311 36.7
Eucgr.J01725 Eucalyptus grandis HOM05D007298 ORTHO05D009226 7.5e-33 145.6 257 42.8
Glyma.13G177000 Glycine max HOM05D007298 ORTHO05D009226 1.7e-32 144.4 254 42.5
Sc05g0003880 Simmondsia chinensis HOM05D007298 ORTHO05D009226 1.7e-32 144.4 274 38.0
Haze_22918 Corylus avellana HOM05D007298 ORTHO05D009226 2.2e-32 144.1 310 38.1
Dinv31519 Davidia involucrata HOM05D007298 ORTHO05D009226 2.2e-32 144.1 171 52.6
Psat7g113280 Pisum sativum HOM05D007298 ORTHO05D009226 2.2e-32 144.1 256 40.6
Nitab4.5_0001600g0070 Nicotiana tabacum HOM05D005538 ORTHO05D007055 2.9e-32 143.7 350 35.1
MELO3C026268.2 Cucumis melo HOM05D007298 ORTHO05D009226 3.7e-32 143.3 325 36.9
Lalb_Chr09g0327771 Lupinus albus HOM05D007298 ORTHO05D009226 5.4e-31 139.4 259 41.3
CARHR233970 Cardamine hirsuta HOM05D007298 ORTHO05D009226 3.5e-30 136.7 277 40.4
Lsat_1_v5_gn_4_2201 Lactuca sativa HOM05D007298 ORTHO05D009226 4.6e-30 136.3 282 39.4
Lalb_Chr05g0218531 Lupinus albus HOM05D007298 ORTHO05D009226 7.8e-30 135.6 316 34.8
Medtr4g088515 Medicago truncatula HOM05D000062 ORTHO05D000043 1.3e-29 134.8 328 33.8
AT4G26415 Arabidopsis thaliana HOM05D007298 ORTHO05D009226 3.0e-29 133.7 274 40.9
EL10Ac4g07728 Beta vulgaris HOM05D007298 ORTHO05D009226 3.0e-29 133.7 286 37.1
SGA_v2.0_scaffold9G04794 Striga asiatica HOM05D002076 ORTHO05D002087 3.0e-29 133.7 257 39.7
TWI32G0891 Tripterygium wilfordii HOM05D007298 ORTHO05D009226 3.0e-29 133.7 289 37.7
CANSAT11G1103 Cannabis sativa HOM05D007298 ORTHO05D009226 3.9e-29 133.3 264 42.0
Duzib084G1143 Durio zibethinus HOM05D007298 ORTHO05D009226 3.9e-29 133.3 257 40.9
Prupe.6G001000 Prunus persica HOM05D007298 ORTHO05D009226 5.1e-29 132.9 351 35.6
QL01p007822 Quercus lobata HOM05D007298 ORTHO05D009226 5.1e-29 132.9 253 40.7
FAN11G2203 Fragaria x ananassa HOM05D007298 ORTHO05D009226 8.6e-29 132.1 256 38.3
Carub.0007s1454 Capsella rubella HOM05D007298 ORTHO05D009226 1.1e-28 131.7 274 40.1
FAN21G1139 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.1e-28 131.7 256 38.3
FAN25G2175 Fragaria x ananassa HOM05D007298 ORTHO05D009226 1.1e-28 131.7 256 38.3
THA.LOC104813474 Tarenaya hassleriana HOM05D007298 ORTHO05D009226 1.5e-28 131.3 265 41.5
AUR62033147 Chenopodium quinoa HOM05D007298 ORTHO05D009226 2.5e-28 130.6 284 35.9
Potri.001G001000 Populus trichocarpa HOM05D007298 ORTHO05D009226 4.3e-28 129.8 245 39.6
C07p54880 Brassica napus HOM05D007298 ORTHO05D009226 7.3e-28 129.0 271 41.0
BolC7t45976H Brassica oleracea HOM05D007298 ORTHO05D009226 7.3e-28 129.0 271 41.0
HanXRQChr12g0385721 Helianthus annuus HOM05D007298 ORTHO05D009226 7.3e-28 129.0 303 35.3
A03p56680 Brassica napus HOM05D007298 ORTHO05D009226 1.6e-27 127.9 270 40.7
BraA03t14738Z Brassica rapa HOM05D007298 ORTHO05D009226 1.6e-27 127.9 270 40.7
Sopen05g018720 Solanum pennellii HOM05D007298 ORTHO05D009226 1.6e-27 127.9 244 42.2
Sp7g24320 Schrenkiella parvula HOM05D007298 ORTHO05D009226 2.8e-27 127.1 270 41.5
AL7G26540 Arabidopsis lyrata HOM05D007298 ORTHO05D009226 1.1e-26 125.2 252 40.5
Thhalv10026008m.g Eutrema salsugineum HOM05D007298 ORTHO05D009226 6.8e-26 122.5 245 42.0
Sed0020092 Sechium edule HOM05D007298 ORTHO05D009226 6.8e-26 122.5 281 36.7
ATR0068G085 Amborella trichopoda HOM05D007298 ORTHO05D009226 1.2e-25 121.7 264 36.4
Solyc05g024020.1 Solanum lycopersicum HOM05D007298 ORTHO05D009226 2.6e-25 120.6 240 41.7
Manes.15G111000 Manihot esculenta HOM05D007298 ORTHO05D009226 3.4e-25 120.2 307 35.2
Ah.08g213460 Amaranthus hybridus HOM05D007298 ORTHO05D009226 7.6e-25 119.0 280 35.0
BcaC06g32750 Brassica carinata HOM05D007298 ORTHO05D009226 2.2e-24 117.5 250 40.8
Actinidia09612 Actinidia chinensis HOM05D007298 ORTHO05D009226 2.9e-24 117.1 258 36.8
unitig_22.g6385 Utricularia gibba HOM05D007298 ORTHO05D009226 1.1e-23 115.2 257 34.6
BcaNung02423 Brassica carinata HOM05D007298 ORTHO05D009226 7.1e-23 112.5 271 39.5
Zm00001eb127960 Zea mays HOM05D007298 ORTHO05D009226 1.5e-20 104.8 297 33.0
SalBow2G0405 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.2e-19 101.7 249 34.5
SalBow2G1404 Salvia bowleyana HOM05D007298 ORTHO05D009226 1.2e-19 101.7 249 34.5
Hma1.2p1_0459F.1_g157260 Hydrangea macrophylla HOM05D007298 ORTHO05D009226 2.1e-19 100.9 257 35.4
Cpa.g.sc119.13 Carica papaya HOM05D007298 ORTHO05D009226 5.8e-17 92.8 238 35.3
Glyma.15G076400 Glycine max HOM05D007298 ORTHO05D009226 5.4e-15 86.3 250 33.6
CDE07G0295 Ceratophyllum demersum HOM05D000114 ORTHO05D000038 2.8e-11 73.9 137 39.4
Nitab4.5_0000340g0060 Nicotiana tabacum HOM05D007298 ORTHO05D009226 1.1e-10 72.0 95 49.5
Glyma.13G237100 Glycine max HOM05D007298 ORTHO05D009226 1.4e-10 71.6 151 37.1
Phvul.006G183700 Phaseolus vulgaris HOM05D007298 ORTHO05D009226 7.6e-09 65.9 248 29.0


User provided reference genes

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