Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006984 Daucus carota HOM05D007199 ORTHO05D007257 2.6e-155 552.0 275 100.0
Dinv32625 Davidia involucrata HOM05D007199 ORTHO05D007257 3.6e-19 99.8 241 35.3
Haze_15700 Corylus avellana HOM05D007199 ORTHO05D007257 1.0e-18 98.2 296 31.8
CiPaw.02G043300 Carya illinoinensis HOM05D007199 ORTHO05D007257 5.1e-18 95.9 261 31.8
VMungo0331G0932 Vigna mungo HOM05D007199 ORTHO05D007257 5.7e-17 92.4 258 32.2
QL08p046296 Quercus lobata HOM05D007199 ORTHO05D007257 3.7e-16 89.7 270 32.6
Potri.014G102600 Populus trichocarpa HOM05D007199 ORTHO05D007257 1.2e-14 84.7 269 32.3
MD00G1035800 Malus domestica HOM05D007199 ORTHO05D007257 5.9e-14 82.4 277 29.6
Glyma.07G052500 Glycine max HOM05D007199 ORTHO05D007257 7.7e-14 82.0 273 31.9
MD07G1155200 Malus domestica HOM05D007199 ORTHO05D007257 1.0e-13 81.6 310 31.0
Phvul.010G116850 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 2.9e-13 80.1 265 32.5
Phvul.010G116900 Phaseolus vulgaris HOM05D007199 ORTHO05D007257 2.9e-13 80.1 265 32.5
Nitab4.5_0002638g0020 Nicotiana tabacum HOM05D007199 ORTHO05D007257 3.8e-13 79.7 266 30.5
Glyma.16G021400 Glycine max HOM05D007199 ORTHO05D007257 6.5e-13 79.0 276 31.5
RcHm_v2.0_Chr1g0360641 Rosa chinensis HOM05D007199 ORTHO05D007257 6.5e-13 79.0 275 31.3
Aa31LG1G28040 Aethionema arabicum HOM05D007199 ORTHO05D007257 8.5e-13 78.6 232 31.5
Nn1g00376 Nelumbo nucifera HOM05D007199 ORTHO05D007257 8.5e-13 78.6 231 33.3
FAN03G0194 Fragaria x ananassa HOM05D007199 ORTHO05D007257 1.5e-12 77.8 260 30.0
Manes.05G019000 Manihot esculenta HOM05D007199 ORTHO05D007257 2.5e-12 77.0 299 31.1
FAN10G2445 Fragaria x ananassa HOM05D007199 ORTHO05D007257 4.2e-12 76.3 265 30.9
FAN10G3440 Fragaria x ananassa HOM05D007199 ORTHO05D007257 4.2e-12 76.3 265 30.9
FvH4_7g17280 Fragaria vesca HOM05D007199 ORTHO05D007257 5.5e-12 75.9 260 30.8
Lj3g0002992 Lotus japonicus HOM05D007199 ORTHO05D007257 5.5e-12 75.9 278 30.9
Solyc10g009320.3 Solanum lycopersicum HOM05D007199 ORTHO05D007257 5.5e-12 75.9 252 29.4
Ciclev10024292m.g Citrus clementina HOM05D007199 ORTHO05D007257 7.2e-12 75.5 296 31.4
FAN06G3172 Fragaria x ananassa HOM05D007199 ORTHO05D007257 7.2e-12 75.5 260 30.8
Prupe.2G194000 Prunus persica HOM05D007199 ORTHO05D007257 9.4e-12 75.1 314 29.3
Eucgr.E00024 Eucalyptus grandis HOM05D007199 ORTHO05D007257 2.1e-11 73.9 262 29.4
TAR629G0242 Trochodendron aralioides HOM05D007199 ORTHO05D007257 4.7e-11 72.8 250 28.0
Sopen10g005110 Solanum pennellii HOM05D007199 ORTHO05D007257 6.1e-11 72.4 250 30.0
Lalb_Chr15g0076391 Lupinus albus HOM05D007199 ORTHO05D007257 8.0e-11 72.0 263 28.1
GSVIVG01027402001 Vitis vinifera HOM05D007199 ORTHO05D007257 1.8e-10 70.9 264 30.3
Dinv34240 Davidia involucrata HOM05D007199 ORTHO05D007257 2.3e-10 70.5 284 29.9
FAN01G2057 Fragaria x ananassa HOM05D007199 ORTHO05D007257 3.0e-10 70.1 262 29.4
Lalb_Chr10g0100741 Lupinus albus HOM05D007199 ORTHO05D007257 3.0e-10 70.1 269 31.6
TAR375G0146 Trochodendron aralioides HOM05D007199 ORTHO05D007257 4.0e-10 69.7 289 27.3
ECA236G3069 Erigeron canadensis HOM05D007199 ORTHO05D007257 5.2e-10 69.3 235 28.9
Hma1.2p1_0309F.1_g120450 Hydrangea macrophylla HOM05D007199 ORTHO05D007257 5.2e-10 69.3 256 31.2
TWI23G0381 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 6.7e-10 68.9 273 30.0
Thecc.01G336800 Theobroma cacao HOM05D007199 ORTHO05D007257 1.1e-09 68.2 290 30.0
TWI14G0585 Tripterygium wilfordii HOM05D007199 ORTHO05D007257 1.5e-09 67.8 262 30.9
Duzib138G1694 Durio zibethinus HOM05D007199 ORTHO05D007257 2.0e-09 67.4 292 29.5
Potri.002G175300 Populus trichocarpa HOM05D007199 ORTHO05D007257 2.0e-09 67.4 265 28.3
THA.LOC104817388 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 2.0e-09 67.4 227 30.8
Manes.01G254801 Manihot esculenta HOM05D007199 ORTHO05D007257 4.4e-09 66.2 314 29.3
Lsat_1_v5_gn_4_32721 Lactuca sativa HOM05D007199 ORTHO05D007257 5.7e-09 65.9 247 30.0
PSO782G1188 Papaver somniferum HOM05D007199 ORTHO05D007257 5.7e-09 65.9 230 27.8
Peaxi162Scf00087g00199 Petunia axillaris HOM05D007199 ORTHO05D007257 7.5e-09 65.5 231 28.6
Psat4g216200 Pisum sativum HOM05D007199 ORTHO05D007257 7.5e-09 65.5 262 26.0
DCAR_002988 Daucus carota HOM05D007199 ORTHO05D007257 9.7e-09 65.1 240 30.4
HanXRQChr04g0120361 Helianthus annuus HOM05D007199 ORTHO05D007257 1.7e-08 64.3 227 29.5
Sopen01g040020 Solanum pennellii HOM05D007199 ORTHO05D007257 1.7e-08 64.3 261 28.7
Nitab4.5_0014168g0010 Nicotiana tabacum HOM05D007199 ORTHO05D007257 2.2e-08 63.9 267 29.2
TPR.G15900 Trifolium pratense HOM05D007199 ORTHO05D007257 2.2e-08 63.9 262 25.6
CANSAT56G1498 Cannabis sativa HOM05D007199 ORTHO05D007257 2.8e-08 63.5 281 29.2
ClCG06G002790 Citrullus lanatus HOM05D007199 ORTHO05D007257 2.8e-08 63.5 260 30.0
Medtr8g027100 Medicago truncatula HOM05D007199 ORTHO05D007257 4.8e-08 62.8 260 26.9
PGSC0003DMG400000126 Solanum tuberosum HOM05D007199 ORTHO05D007257 4.8e-08 62.8 230 29.1
Gohir.D08G145100 Gossypium hirsutum HOM05D007199 ORTHO05D007257 6.3e-08 62.4 261 29.1
Solyc01g096260.4 Solanum lycopersicum HOM05D007199 ORTHO05D007257 6.3e-08 62.4 263 27.4
BcaB01g03200 Brassica carinata HOM05D012720 ORTHO05D007257 8.2e-08 62.0 290 25.9
CSS0043385 Camellia sinensis var. sinensis HOM05D007199 ORTHO05D007257 1.1e-07 61.6 285 28.4
CARHR141980 Cardamine hirsuta HOM05D012720 ORTHO05D007257 1.1e-07 61.6 284 27.5
MELO3C022248.2 Cucumis melo HOM05D007199 ORTHO05D007257 1.4e-07 61.2 265 27.5
Duzib133G0933 Durio zibethinus HOM05D007199 ORTHO05D007257 1.4e-07 61.2 288 30.9
Gohir.A08G124000 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.4e-07 61.2 260 28.8
Ca_23498_v3 Cicer arietinum L. HOM05D007199 ORTHO05D007257 2.4e-07 60.5 270 29.6
Gorai.004G150000 Gossypium raimondii HOM05D007199 ORTHO05D007257 2.4e-07 60.5 261 29.1
BcaC02g12658 Brassica carinata HOM05D012720 ORTHO05D007257 3.1e-07 60.1 295 29.2
Thhalv10001576m.g Eutrema salsugineum HOM05D012720 ORTHO05D007257 3.1e-07 60.1 291 26.8
Cc02_g39760 Coffea canephora HOM05D007199 ORTHO05D007257 4.1e-07 59.7 214 28.5
BraA05t19115Z Brassica rapa HOM05D012720 ORTHO05D007257 5.3e-07 59.3 298 30.2
THA.LOC104802086 Tarenaya hassleriana HOM05D007199 ORTHO05D007257 7.0e-07 58.9 283 28.3
Gorai.007G111200 Gossypium raimondii HOM05D007199 ORTHO05D007257 1.2e-06 58.2 272 27.2
Gohir.D11G103900 Gossypium hirsutum HOM05D007199 ORTHO05D007257 1.6e-06 57.8 272 26.8
SalBow5G5634 Salvia bowleyana HOM05D007199 ORTHO05D007257 1.6e-06 57.8 243 28.8
C04p01310 Brassica napus HOM05D012720 ORTHO05D007257 2.7e-06 57.0 297 29.6
BolC4t21784H Brassica oleracea HOM05D012720 ORTHO05D007257 2.7e-06 57.0 297 29.6
Sp4g28690 Schrenkiella parvula HOM05D012720 ORTHO05D007257 2.7e-06 57.0 301 26.9
Sed0010537 Sechium edule HOM05D007199 ORTHO05D007257 2.7e-06 57.0 264 26.1
Carub.0004s2935 Capsella rubella HOM05D012720 ORTHO05D007257 3.5e-06 56.6 273 25.3
CDE11G0583 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 3.5e-06 56.6 236 29.7
Cpa.g.sc144.10 Carica papaya HOM05D007199 ORTHO05D007257 4.5e-06 56.2 281 26.3
CDE09G0027 Ceratophyllum demersum HOM05D007199 ORTHO05D007257 4.5e-06 56.2 253 28.1
PGSC0003DMG400005529 Solanum tuberosum HOM05D007199 ORTHO05D007257 4.5e-06 56.2 245 29.0
A05p01150 Brassica napus HOM05D012720 ORTHO05D007257 5.9e-06 55.8 297 29.0
CiPaw.01G079500 Carya illinoinensis HOM05D007199 ORTHO05D007257 5.9e-06 55.8 264 28.8
AL4G46070 Arabidopsis lyrata HOM05D012720 ORTHO05D007257 7.7e-06 55.5 267 25.8
AT2G46640 Arabidopsis thaliana HOM05D012720 ORTHO05D007257 7.7e-06 55.5 275 24.4


User provided reference genes

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