Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006947 Daucus carota HOM05D004687 ORTHO05D006002 0.0e+00 1082.4 566 100.0
Dinv32519 Davidia involucrata HOM05D004687 ORTHO05D006002 2.8e-143 513.1 558 55.2
Nitab4.5_0000915g0140 Nicotiana tabacum HOM05D004687 ORTHO05D006002 7.3e-136 488.4 566 52.1
Lj7A508T42 Lonicera japonica HOM05D004687 ORTHO05D006002 4.8e-135 485.7 547 53.9
Solyc01g095090.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 6.9e-134 481.9 546 51.8
PGSC0003DMG400000194 Solanum tuberosum HOM05D004687 ORTHO05D006002 1.4e-131 474.2 562 50.9
Cc02_g38540 Coffea canephora HOM05D004687 ORTHO05D006002 2.7e-130 469.9 546 51.8
Oeu063679.1 Olea europaea HOM05D004687 ORTHO05D006002 1.7e-129 467.2 562 49.5
TAR374G1208 Trochodendron aralioides HOM05D004687 ORTHO05D006002 2.0e-125 453.8 566 48.2
Peaxi162Scf00020g01410 Petunia axillaris HOM05D004687 ORTHO05D006002 1.3e-124 451.1 576 50.2
MSTRG.20861 Avicennia marina HOM05D004687 ORTHO05D006002 3.5e-122 443.0 563 45.6
Nitab4.5_0009238g0010 Nicotiana tabacum HOM05D004687 ORTHO05D006002 6.0e-122 442.2 562 48.8
CSS0026327 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 5.6e-120 435.6 569 48.7
Sabra14G0065300 Salix brachista HOM05D004687 ORTHO05D006002 1.3e-119 434.5 566 46.1
Atru.chr5.577 Acer truncatum HOM05D004687 ORTHO05D006002 1.1e-118 431.4 562 49.1
GSVIVG01026963001 Vitis vinifera HOM05D004687 ORTHO05D006002 1.1e-118 431.4 554 50.2
Atru.chr5.560 Acer truncatum HOM05D004687 ORTHO05D006002 1.8e-118 430.6 562 49.1
CiPaw.02G034500 Carya illinoinensis HOM05D004687 ORTHO05D006002 1.8e-118 430.6 560 47.5
CANSAT56G3669 Cannabis sativa HOM05D004687 ORTHO05D006002 1.2e-117 427.9 554 47.3
Eucgr.D02323 Eucalyptus grandis HOM05D004687 ORTHO05D006002 7.6e-117 425.2 549 47.5
Migut.B01796 Erythranthe guttata HOM05D004687 ORTHO05D006002 1.3e-116 424.5 545 46.6
Manes.01G252600 Manihot esculenta HOM05D004687 ORTHO05D006002 2.5e-115 420.2 555 47.9
Nn1g01677 Nelumbo nucifera HOM05D004687 ORTHO05D006002 3.2e-115 419.9 546 48.0
ClCG06G003410 Citrullus lanatus HOM05D004687 ORTHO05D006002 3.5e-114 416.4 551 47.5
Peaxi162Scf00403g00830 Petunia axillaris HOM05D004687 ORTHO05D006002 2.3e-113 413.7 522 48.7
Sed0003221 Sechium edule HOM05D004687 ORTHO05D006002 2.3e-113 413.7 558 46.4
Potri.014G089800 Populus trichocarpa HOM05D004687 ORTHO05D006002 5.7e-112 409.1 552 45.5
Cfa003875 Carpinus fangiana HOM05D004687 ORTHO05D006002 1.4e-110 404.4 538 48.9
CSS0036615 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 1.8e-110 404.1 539 47.9
Aqoxy7G00187 Aquilegia oxysepala HOM05D004687 ORTHO05D006002 5.3e-110 402.5 588 43.0
Rhsim07G0010800 Rhododendron simsii HOM05D004687 ORTHO05D006002 3.4e-109 399.8 608 43.1
Psat4g212240 Pisum sativum HOM05D004687 ORTHO05D006002 2.5e-107 393.7 544 45.2
Thecc.01G352900 Theobroma cacao HOM05D004687 ORTHO05D006002 3.2e-107 393.3 556 47.3
Lj3g0008911 Lotus japonicus HOM05D004687 ORTHO05D006002 2.7e-106 390.2 556 45.3
Sopen05g028410 Solanum pennellii HOM05D004687 ORTHO05D006002 4.6e-106 389.4 524 44.8
PGSC0003DMG400033881 Solanum tuberosum HOM05D004687 ORTHO05D006002 7.9e-106 388.7 528 44.7
QL04p055402 Quercus lobata HOM05D004687 ORTHO05D006002 1.3e-105 387.9 662 40.8
TWI14G1112 Tripterygium wilfordii HOM05D004687 ORTHO05D006002 2.3e-105 387.1 555 44.5
Sc01g0003240 Simmondsia chinensis HOM05D004687 ORTHO05D006002 3.9e-105 386.3 560 44.3
Duzib138G0011 Durio zibethinus HOM05D004687 ORTHO05D006002 1.1e-104 384.8 558 46.2
PSO478G3840 Papaver somniferum HOM05D004687 ORTHO05D006002 1.5e-104 384.4 582 41.6
Phvul.010G104100 Phaseolus vulgaris HOM05D004687 ORTHO05D006002 1.5e-104 384.4 562 44.8
Solyc05g050020.3 Solanum lycopersicum HOM05D004687 ORTHO05D006002 2.5e-104 383.6 533 44.8
VMungo0331G0070 Vigna mungo HOM05D004687 ORTHO05D006002 2.5e-104 383.6 554 45.5
COL.COLO4_12774 Corchorus olitorius HOM05D004687 ORTHO05D006002 5.7e-104 382.5 557 46.3
Glyma.16G032000 Glycine max HOM05D004687 ORTHO05D006002 5.7e-104 382.5 562 44.8
Cpa.g.sc184.31 Carica papaya HOM05D004687 ORTHO05D006002 7.4e-104 382.1 551 46.3
MELO3C021180.2 Cucumis melo HOM05D004687 ORTHO05D006002 2.2e-103 380.6 584 44.2
Medtr8g028580 Medicago truncatula HOM05D004687 ORTHO05D006002 6.3e-103 379.0 548 45.3
PSO266G0021 Papaver somniferum HOM05D004687 ORTHO05D006002 6.3e-103 379.0 598 41.0
Gohir.D11G097000 Gossypium hirsutum HOM05D004687 ORTHO05D006002 8.2e-103 378.6 544 44.5
Gorai.007G103300 Gossypium raimondii HOM05D004687 ORTHO05D006002 1.1e-102 378.3 544 44.5
Ciclev10019565m.g Citrus clementina HOM05D004687 ORTHO05D006002 1.8e-102 377.5 542 45.8
Lsat_1_v5_gn_7_3881 Lactuca sativa HOM05D004687 ORTHO05D006002 3.4e-101 373.2 538 43.9
Ca_03498_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 1.0e-100 371.7 544 44.3
Prupe.2G177100 Prunus persica HOM05D004687 ORTHO05D006002 6.5e-100 369.0 564 42.2
PGR031G1931 Punica granatum HOM05D004687 ORTHO05D006002 1.4e-99 367.9 561 42.4
MBI04_g26968_MAGBIO Magnolia biondii HOM05D004687 ORTHO05D006002 1.2e-98 364.8 560 42.9
THA.LOC104817038 Tarenaya hassleriana HOM05D004687 ORTHO05D006002 1.8e-97 360.9 537 44.1
Hund27243 Selenicereus undatus HOM05D004687 ORTHO05D006002 2.3e-97 360.5 543 43.3
Lalb_Chr10g0096671 Lupinus albus HOM05D004687 ORTHO05D006002 3.0e-97 360.1 547 43.3
SalBow3G3455 Salvia bowleyana HOM05D004687 ORTHO05D006002 2.6e-96 357.1 598 40.8
CSS0021310 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 3.3e-96 356.7 539 45.3
CSS0041346 Camellia sinensis var. sinensis HOM05D004687 ORTHO05D006002 3.3e-96 356.7 495 46.9
ECA236G1242 Erigeron canadensis HOM05D004687 ORTHO05D006002 4.4e-96 356.3 543 42.0
arahy.Tifrunner.gnm1.ann1.X9JZY0 Arachis hypogaea HOM05D004687 ORTHO05D006002 7.4e-96 355.5 570 42.3
arahy.Tifrunner.gnm1.ann1.PSKN5N Arachis hypogaea HOM05D004687 ORTHO05D006002 2.2e-95 354.0 569 42.0
Ah.05g180180 Amaranthus hybridus HOM05D004687 ORTHO05D006002 3.0e-89 333.6 285 62.5
Actinidia20159 Actinidia chinensis HOM05D004687 ORTHO05D006002 1.1e-88 331.6 558 41.9
unitig_699.g19806 Utricularia gibba HOM05D004687 ORTHO05D006002 1.1e-88 331.6 534 40.8
SGA_v2.0_scaffold95G28807 Striga asiatica HOM05D004687 ORTHO05D006002 1.5e-88 331.3 559 40.4
MD01G1070600 Malus domestica HOM05D004687 ORTHO05D006002 1.2e-85 321.6 544 41.4
HanXRQChr04g0120761 Helianthus annuus HOM05D004687 ORTHO05D006002 1.3e-84 318.2 542 41.3
RcHm_v2.0_Chr1g0357651 Rosa chinensis HOM05D004687 ORTHO05D006002 1.7e-84 317.8 576 41.1
vmacro13232 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 6.5e-84 315.8 329 55.0
HanXRQChr06g0170331 Helianthus annuus HOM05D004687 ORTHO05D006002 1.9e-83 314.3 543 40.3
AT4G01270 Arabidopsis thaliana HOM05D004687 ORTHO05D006002 2.5e-83 313.9 544 39.0
TPR.G28289 Trifolium pratense HOM05D004687 ORTHO05D006002 5.5e-83 312.8 512 41.8
FvH4_7g15320 Fragaria vesca HOM05D004687 ORTHO05D006002 9.4e-83 312.0 574 40.6
FAN06G2065 Fragaria x ananassa HOM05D004687 ORTHO05D006002 9.4e-83 312.0 574 40.6
Carub.0006s3633 Capsella rubella HOM05D004687 ORTHO05D006002 1.6e-82 311.2 541 40.5
FAN10G0227 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.1e-82 310.8 576 40.3
FAN06G2774 Fragaria x ananassa HOM05D004687 ORTHO05D006002 8.0e-82 308.9 574 40.4
Aa31LG5G750 Aethionema arabicum HOM05D004687 ORTHO05D006002 1.8e-81 307.8 533 40.3
CARHR249040 Cardamine hirsuta HOM05D004687 ORTHO05D006002 9.7e-80 302.0 544 38.8
Thhalv10029490m.g Eutrema salsugineum HOM05D004687 ORTHO05D006002 3.7e-79 300.1 542 38.6
ATR0661G462 Amborella trichopoda HOM05D004687 ORTHO05D006002 6.3e-79 299.3 552 39.1
AL6G52120 Arabidopsis lyrata HOM05D004687 ORTHO05D006002 1.1e-78 298.5 546 38.3
BraA03t12367Z Brassica rapa HOM05D004687 ORTHO05D006002 2.7e-77 293.9 544 39.3
Sp6g00860 Schrenkiella parvula HOM05D004687 ORTHO05D006002 2.2e-76 290.8 544 39.0
Nitab4.5_0002262g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 6.5e-76 289.3 505 40.4
A03p31950 Brassica napus HOM05D004687 ORTHO05D006002 1.1e-75 288.5 542 38.9
BcaC01g06853 Brassica carinata HOM05D004687 ORTHO05D006002 1.9e-75 287.7 371 47.2
CsaV3_6G000900 Cucumis sativus L. HOM05D004687 ORTHO05D006002 1.9e-75 287.7 480 43.1
AUR62004410 Chenopodium quinoa HOM05D004687 ORTHO05D006002 3.2e-75 287.0 293 53.9
C03p38970 Brassica napus HOM05D004687 ORTHO05D006002 5.5e-75 286.2 408 44.4
BolC3t16169H Brassica oleracea HOM05D004687 ORTHO05D006002 5.5e-75 286.2 542 38.7
Haze_15561 Corylus avellana HOM05D004687 ORTHO05D006002 1.0e-73 282.0 499 42.5
BraA09t35739Z Brassica rapa HOM05D004687 ORTHO05D006002 2.3e-73 280.8 306 51.3
A09p00090 Brassica napus HOM05D004687 ORTHO05D006002 5.2e-73 279.6 540 38.5
BcaC04g24137 Brassica carinata HOM05D004687 ORTHO05D006002 8.8e-73 278.9 545 37.2
C09p00700 Brassica napus HOM05D004687 ORTHO05D006002 8.8e-73 278.9 545 37.2
BolC9t53004H Brassica oleracea HOM05D004687 ORTHO05D006002 8.8e-73 278.9 545 37.2
BcaB01g02150 Brassica carinata HOM05D004687 ORTHO05D006002 1.3e-71 275.0 540 38.0
Prupe.2G177000 Prunus persica HOM05D004687 ORTHO05D006002 1.1e-70 271.9 500 38.2
Zm00001eb416420 Zea mays HOM05D004687 ORTHO05D006002 1.1e-70 271.9 571 35.7
SEGI_33633 Sequoiadendron giganteum HOM05D004687 ORTHO05D006002 1.8e-70 271.2 558 35.7
EL10Ac1g00358 Beta vulgaris HOM05D004687 ORTHO05D006002 8.5e-68 262.3 462 38.1
MD01G1070500 Malus domestica HOM05D004687 ORTHO05D006002 1.1e-67 261.9 503 36.0
FAN10G4173 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.5e-67 259.6 576 36.8
Os08g0151700 Oryza sativa ssp. japonica HOM05D004687 ORTHO05D006002 1.5e-64 251.5 563 32.9
Nitab4.5_0003779g0080 Nicotiana tabacum HOM05D004687 ORTHO05D006002 4.9e-63 246.5 472 38.3
BcaB01g02289 Brassica carinata HOM05D004687 ORTHO05D006002 1.6e-61 241.5 275 50.5
Lalb_Chr17g0339021 Lupinus albus HOM05D004687 ORTHO05D006002 2.9e-60 237.3 224 57.1
Gohir.A11G092200 Gossypium hirsutum HOM05D004687 ORTHO05D006002 1.3e-55 221.9 408 39.7
FvH4_1g19860 Fragaria vesca HOM05D004687 ORTHO05D006002 1.8e-54 218.0 259 49.0
SGA_v2.0_scaffold95G28804 Striga asiatica HOM05D004687 ORTHO05D006002 1.8e-54 218.0 335 40.6
FAN19G0767 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.4e-54 216.5 259 48.6
AUR62022616 Chenopodium quinoa HOM05D004687 ORTHO05D006002 1.6e-53 214.9 274 47.1
RcHm_v2.0_Chr2g0111671 Rosa chinensis HOM05D004687 ORTHO05D006002 1.6e-53 214.9 259 49.0
FAN28G2978 Fragaria x ananassa HOM05D004687 ORTHO05D006002 1.7e-52 211.5 258 48.4
FAN26G2006 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.5e-51 207.6 263 48.3
FAN01G0098 Fragaria x ananassa HOM05D004687 ORTHO05D006002 5.2e-49 199.9 495 35.2
Pp3c23_12760 Physcomitrium patens HOM05D004687 ORTHO05D006002 1.7e-47 194.9 346 37.3
CDE11G0743 Ceratophyllum demersum HOM05D002440 ORTHO05D002576 2.2e-47 194.5 422 35.5
SMO147G0044 Selaginella moellendorffii HOM05D004687 ORTHO05D006002 5.4e-46 189.9 286 37.8
Potri.002G164000 Populus trichocarpa HOM05D004687 ORTHO05D006002 2.7e-37 161.0 305 37.4
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 3.1e-33 147.5 123 59.3
FAN23G1626 Fragaria x ananassa HOM05D004687 ORTHO05D006002 2.6e-32 144.4 271 38.4
Sopen01g038880 Solanum pennellii HOM05D004687 ORTHO05D006002 2.6e-32 144.4 330 36.4
MD01G1071100 Malus domestica HOM05D004687 ORTHO05D006002 3.5e-29 134.0 100 63.0
FAN03G2011 Fragaria x ananassa HOM05D004687 ORTHO05D006002 6.0e-29 133.3 398 33.2
SHI13366 Sapria himalayana HOM05D004687 ORTHO05D006002 7.8e-29 132.9 156 46.2
CBR_g45680 Chara braunii HOM05D004687 ORTHO05D006002 2.5e-27 127.9 286 29.7
QL06p033484 Quercus lobata HOM05D004687 ORTHO05D006002 2.5e-27 127.9 116 52.6
Actinidia10067 Actinidia chinensis HOM05D004687 ORTHO05D006002 4.7e-26 123.6 389 32.1
Aa31sc194G60 Aethionema arabicum HOM05D004687 ORTHO05D006002 4.4e-24 117.1 136 52.2
Lalb_Chr17g0339031 Lupinus albus HOM05D004687 ORTHO05D006002 6.4e-23 113.2 315 32.4
vmacro13233 Vaccinium macrocarpon HOM05D004687 ORTHO05D006002 1.9e-22 111.7 108 50.9
SHI13367 Sapria himalayana HOM05D004687 ORTHO05D006002 4.2e-22 110.5 386 28.0
ATR0804G028 Amborella trichopoda HOM05D004687 ORTHO05D006002 2.7e-21 107.8 130 50.0
PSO541G1518 Papaver somniferum HOM05D004687 ORTHO05D006002 3.9e-20 104.0 164 37.8
COL.COLO4_21921 Corchorus olitorius HOM05D004687 ORTHO05D006002 1.1e-19 102.4 102 47.1
SGA_v2.0_scaffold95G28808 Striga asiatica HOM05D005821 ORTHO05D006649 1.5e-19 102.1 100 53.0
Mapoly0091s0017 Marchantia polymorpha HOM05D004687 ORTHO05D006002 3.6e-18 97.4 285 28.4
Actinidia20138 Actinidia chinensis HOM05D004687 ORTHO05D006002 3.4e-16 90.9 69 63.8
Ca_03421_v3 Cicer arietinum L. HOM05D004687 ORTHO05D006002 8.7e-12 76.3 125 42.4


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