Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006906 Daucus carota HOM05D007580 ORTHO05D009620 2.5e-81 305.4 160 100.0
Potri.002G153000 Populus trichocarpa HOM05D007580 ORTHO05D009620 1.9e-28 129.8 173 49.7
CANSAT56G4452 Cannabis sativa HOM05D007580 ORTHO05D009620 3.5e-27 125.6 165 47.3
Gorai.004G156400 Gossypium raimondii HOM05D007580 ORTHO05D009620 1.0e-26 124.0 166 47.6
Duzib138G0841 Durio zibethinus HOM05D007580 ORTHO05D009620 1.3e-26 123.6 169 47.9
Gohir.D08G150700 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.3e-26 123.6 166 47.6
Sopen01g037570 Solanum pennellii HOM05D007580 ORTHO05D009620 5.1e-26 121.7 166 49.4
TWI14G1086 Tripterygium wilfordii HOM05D007580 ORTHO05D009620 8.7e-26 120.9 159 50.9
Gohir.A08G129400 Gossypium hirsutum HOM05D007580 ORTHO05D009620 1.9e-25 119.8 174 46.0
QL08p050656 Quercus lobata HOM05D007580 ORTHO05D009620 2.5e-25 119.4 169 47.3
PGSC0003DMG400017056 Solanum tuberosum HOM05D007580 ORTHO05D009620 2.5e-25 119.4 171 50.3
Potri.014G077000 Populus trichocarpa HOM05D007580 ORTHO05D009620 5.6e-25 118.2 168 47.6
COL.COLO4_12626 Corchorus olitorius HOM05D007580 ORTHO05D009620 7.4e-25 117.9 172 45.9
CSS0034624 Camellia sinensis var. sinensis HOM05D007580 ORTHO05D009620 1.3e-24 117.1 157 47.1
Sabra02G0121300 Salix brachista HOM05D007580 ORTHO05D009620 1.3e-24 117.1 169 47.9
Duzib133G0099 Durio zibethinus HOM05D007580 ORTHO05D009620 1.6e-24 116.7 176 43.8
Medtr7g076270 Medicago truncatula HOM05D007580 ORTHO05D009620 1.6e-24 116.7 162 45.1
MELO3C022528.2 Cucumis melo HOM05D007580 ORTHO05D009620 2.1e-24 116.3 174 47.1
Solyc01g091790.2 Solanum lycopersicum HOM05D007580 ORTHO05D009620 2.8e-24 115.9 169 48.5
ClCG06G000100 Citrullus lanatus HOM05D007580 ORTHO05D009620 3.7e-24 115.5 184 46.7
Ciclev10023708m.g Citrus clementina HOM05D007580 ORTHO05D009620 1.4e-23 113.6 174 46.0
CsaV3_6G005830 Cucumis sativus L. HOM05D007580 ORTHO05D009620 1.8e-23 113.2 178 44.9
Sabra14G0055200 Salix brachista HOM05D007580 ORTHO05D009620 1.8e-23 113.2 168 46.4
Thecc.01G368700 Theobroma cacao HOM05D007580 ORTHO05D009620 1.8e-23 113.2 175 42.9
FAN06G3292 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.4e-23 112.8 153 49.7
FAN06G5062 Fragaria x ananassa HOM05D007580 ORTHO05D009620 2.4e-23 112.8 153 49.7
MD07G1128600 Malus domestica HOM05D007580 ORTHO05D009620 3.1e-23 112.5 156 46.2
Cfa004181 Carpinus fangiana HOM05D007580 ORTHO05D009620 4.0e-23 112.1 166 45.8
Oeu024417.1 Olea europaea HOM05D007580 ORTHO05D009620 4.0e-23 112.1 179 43.0
Haze_15227 Corylus avellana HOM05D007580 ORTHO05D009620 5.3e-23 111.7 166 46.4
FAN10G2444 Fragaria x ananassa HOM05D007580 ORTHO05D009620 5.3e-23 111.7 153 49.7
Manes.05G040200 Manihot esculenta HOM05D007580 ORTHO05D009620 6.9e-23 111.3 155 47.1
FAN01G0874 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.5e-22 110.2 155 48.4
FAN03G2022 Fragaria x ananassa HOM05D007580 ORTHO05D009620 1.5e-22 110.2 155 48.4
Nitab4.5_0004550g0100 Nicotiana tabacum HOM05D007580 ORTHO05D009620 5.8e-22 108.2 189 42.9
TPR.G37829 Trifolium pratense HOM05D007580 ORTHO05D009620 5.8e-22 108.2 164 45.1
Sed0005443 Sechium edule HOM05D007580 ORTHO05D009620 9.9e-22 107.5 165 46.7
VMungo1383G0280 Vigna mungo HOM05D007580 ORTHO05D009620 1.3e-21 107.1 161 47.2
Manes.01G262404 Manihot esculenta HOM05D007580 ORTHO05D009620 2.2e-21 106.3 156 45.5
RcHm_v2.0_Chr1g0352211 Rosa chinensis HOM05D007580 ORTHO05D009620 3.8e-21 105.5 155 47.7
Hma1.2p1_0398F.1_g143830 Hydrangea macrophylla HOM05D007580 ORTHO05D009620 6.4e-21 104.8 178 44.9
Prupe.2G154500 Prunus persica HOM05D007580 ORTHO05D009620 6.4e-21 104.8 162 43.8
Actinidia33444 Actinidia chinensis HOM05D007580 ORTHO05D009620 2.5e-20 102.8 157 45.2
Glyma.18G227800 Glycine max HOM05D007580 ORTHO05D009620 3.2e-20 102.4 162 43.8
Lalb_Chr01g0021151 Lupinus albus HOM05D007580 ORTHO05D009620 3.2e-20 102.4 161 44.7
Migut.B01687 Erythranthe guttata HOM05D007580 ORTHO05D009620 7.1e-20 101.3 178 41.6
Thhalv10009990m.g Eutrema salsugineum HOM05D007580 ORTHO05D009620 7.1e-20 101.3 158 43.7
CARHR000490 Cardamine hirsuta HOM05D007580 ORTHO05D009620 2.7e-19 99.4 158 43.7
Rhsim01G0155700 Rhododendron simsii HOM05D007580 ORTHO05D009620 2.7e-19 99.4 176 43.2
AL1G10480 Arabidopsis lyrata HOM05D007580 ORTHO05D009620 3.5e-19 99.0 149 46.3
GSVIVG01027528001 Vitis vinifera HOM05D007580 ORTHO05D009620 1.8e-18 96.7 151 45.0
TAR375G0300 Trochodendron aralioides HOM05D007580 ORTHO05D009620 2.3e-18 96.3 158 42.4
Peaxi162Scf00021g00055 Petunia axillaris HOM05D007580 ORTHO05D009620 3.9e-18 95.5 179 43.6
AT1G01840 Arabidopsis thaliana HOM05D007580 ORTHO05D009620 6.7e-18 94.7 158 44.3
Carub.0001s0037 Capsella rubella HOM05D007580 ORTHO05D009620 1.5e-17 93.6 156 42.3
CiPaw.01G053500 Carya illinoinensis HOM05D007580 ORTHO05D009620 1.5e-17 93.6 145 42.8
Sp1g00440 Schrenkiella parvula HOM05D007580 ORTHO05D009620 2.5e-17 92.8 157 42.7
Nitab4.5_0010430g0050 Nicotiana tabacum HOM05D007580 ORTHO05D009620 4.3e-17 92.0 172 42.4
Nn1g01349 Nelumbo nucifera HOM05D007580 ORTHO05D009620 5.6e-17 91.7 158 41.1
A10p00190 Brassica napus HOM05D007580 ORTHO05D009620 9.6e-17 90.9 158 41.1
CiPaw.01G052900 Carya illinoinensis HOM05D007580 ORTHO05D009620 9.6e-17 90.9 157 40.8
BraA10t42299Z Brassica rapa HOM05D007580 ORTHO05D009620 1.3e-16 90.5 158 41.1
PGR031G3829 Punica granatum HOM05D007580 ORTHO05D009620 2.1e-16 89.7 175 37.1
BcaB03g13622 Brassica carinata HOM05D007580 ORTHO05D009620 2.8e-16 89.4 159 41.5
BolC5t28812H Brassica oleracea HOM05D007580 ORTHO05D009620 2.8e-16 89.4 159 41.5
Aa31LG1G11200 Aethionema arabicum HOM05D007580 ORTHO05D009620 3.7e-16 89.0 163 36.8
HanXRQChr04g0121781 Helianthus annuus HOM05D007580 ORTHO05D009620 3.7e-16 89.0 149 40.3
PSO782G0900 Papaver somniferum HOM05D007580 ORTHO05D009620 3.7e-16 89.0 183 41.0
PSO782G1514 Papaver somniferum HOM05D007580 ORTHO05D009620 4.8e-16 88.6 184 40.8
Ca_07865_v3 Cicer arietinum L. HOM05D007580 ORTHO05D009620 8.2e-16 87.8 161 39.1
Phvul.008G070400 Phaseolus vulgaris HOM05D007580 ORTHO05D009620 1.1e-15 87.4 141 43.3
PSO478G4117 Papaver somniferum HOM05D007580 ORTHO05D009620 1.4e-15 87.0 183 39.3
TAR003G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.8e-15 86.7 156 37.2
TAR656G0002 Trochodendron aralioides HOM05D007580 ORTHO05D009620 1.8e-15 86.7 156 37.2
Aqoxy7G00453 Aquilegia oxysepala HOM05D007580 ORTHO05D009620 3.1e-15 85.9 155 38.7
Cpa.g.sc18.198 Carica papaya HOM05D007580 ORTHO05D009620 5.3e-15 85.1 132 47.0
ECA236G4638 Erigeron canadensis HOM05D007580 ORTHO05D009620 5.3e-15 85.1 162 38.9
THA.LOC104814091 Tarenaya hassleriana HOM05D007580 ORTHO05D009620 6.9e-15 84.7 151 39.7
Psat0s1132g0080 Pisum sativum HOM05D007580 ORTHO05D009620 4.5e-14 82.0 168 38.1
Lsat_1_v5_gn_7_8361 Lactuca sativa HOM05D007580 ORTHO05D009620 2.9e-13 79.3 162 42.0
Lsat_1_v5_gn_7_8421 Lactuca sativa HOM05D007580 ORTHO05D009620 7.1e-12 74.7 156 37.8
MBI12_g06406_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 1.6e-11 73.6 150 34.0
Ah.05g176020 Amaranthus hybridus HOM05D007580 ORTHO05D009620 2.7e-11 72.8 177 35.0
MBI12_g45243_MAGBIO Magnolia biondii HOM05D007580 ORTHO05D009620 2.7e-11 72.8 150 34.0
SGA_v2.0_scaffold95G28871 Striga asiatica HOM05D007580 ORTHO05D009620 2.7e-11 72.8 170 37.6
C05p00230 Brassica napus HOM05D007580 ORTHO05D009620 1.0e-10 70.9 157 36.9
Glyma.09G264200 Glycine max HOM05D007580 ORTHO05D009620 5.1e-10 68.6 107 39.3
Sc23g0003300 Simmondsia chinensis HOM05D007580 ORTHO05D009620 5.1e-10 68.6 156 35.3
vmacro20972 Vaccinium macrocarpon HOM05D007580 ORTHO05D009620 1.1e-09 67.4 123 40.7
Lj1g0023268 Lotus japonicus HOM05D007580 ORTHO05D009620 6.3e-08 61.6 164 35.4
SalBow3G0911 Salvia bowleyana HOM05D007580 ORTHO05D009620 5.3e-07 58.5 162 32.1


User provided reference genes

Program Settings