Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 1.8e-177 625.9 337 100.0
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 1.3e-124 450.3 343 68.8
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 1.7e-39 167.5 440 34.3
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 3.8e-39 166.4 408 33.6
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 8.5e-39 165.2 323 36.5
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 3.2e-38 163.3 332 38.0
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 1.2e-37 161.4 418 32.5
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 7.9e-37 158.7 339 36.9
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 1.4e-36 157.9 430 35.1
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 1.8e-36 157.5 402 35.3
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 2.3e-36 157.1 335 39.1
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 2.3e-36 157.1 338 34.9
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 6.7e-36 155.6 428 33.4
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 4.3e-35 152.9 410 32.9
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 7.4e-35 152.1 394 34.0
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 1.3e-34 151.4 448 33.7
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 2.8e-34 150.2 404 32.7
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 8.2e-34 148.7 386 34.2
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 8.2e-34 148.7 388 35.3
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 1.4e-33 147.9 288 39.6
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 1.8e-33 147.5 404 33.4
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 3.1e-33 146.7 371 36.1
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 9.1e-33 145.2 424 34.0
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 9.1e-33 145.2 288 39.2
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 9.1e-33 145.2 398 33.4
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.0e-32 144.1 428 33.6
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.6e-32 143.7 427 34.2
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 3.4e-32 143.3 402 31.6
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 4.5e-32 142.9 341 35.2
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 5.9e-32 142.5 408 33.6
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 2.9e-31 140.2 464 29.1
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 8.5e-31 138.7 342 36.0
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 1.1e-30 138.3 342 35.7
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.4e-30 137.9 382 33.5
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 1.9e-30 137.5 428 33.6
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.9e-30 137.5 436 33.9
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 5.5e-30 136.0 453 33.3
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 4.7e-29 132.9 415 32.5
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 4.7e-29 132.9 434 32.9
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 6.1e-29 132.5 468 27.8
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 1.4e-28 131.3 415 33.3
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 1.4e-28 131.3 441 28.3
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 3.0e-28 130.2 376 31.6
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 5.1e-28 129.4 319 32.9
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 8.8e-28 128.6 371 32.3
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.0e-27 127.5 379 30.6
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 1.3e-26 124.8 389 32.6
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 1.1e-25 121.7 412 31.3
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 1.1e-25 121.7 355 32.4
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 2.4e-25 120.6 405 29.6
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 4.1e-25 119.8 371 29.4
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 9.1e-25 118.6 314 35.0
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 7.7e-24 115.5 305 35.4
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.0e-23 115.2 295 35.3
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.7e-23 114.4 124 54.0
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 3.2e-22 110.2 377 26.8
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 9.4e-22 108.6 392 27.6
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.2e-21 108.2 412 30.3
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 1.6e-21 107.8 366 30.9
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 6.1e-21 105.9 402 30.8
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 8.0e-21 105.5 320 34.1
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 1.0e-20 105.1 412 30.1
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 4.0e-20 103.2 417 30.7
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.1e-19 101.7 410 29.0
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 4.8e-18 96.3 394 29.2
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 1.1e-17 95.1 420 27.9
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 2.4e-17 94.0 352 32.7
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 1.6e-16 91.3 118 55.1
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 3.5e-16 90.1 381 28.3
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 5.9e-16 89.4 434 27.4
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 5.9e-16 89.4 402 30.1
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 5.9e-16 89.4 358 26.5
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.3e-15 88.2 409 29.1
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 2.2e-15 87.4 386 29.5
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 2.9e-15 87.0 397 27.5
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 6.5e-15 85.9 326 31.3
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 8.5e-15 85.5 396 28.5
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 1.1e-14 85.1 426 27.0
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 7.2e-14 82.4 360 29.7
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 1.6e-13 81.3 422 27.0
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 2.1e-13 80.9 215 29.8
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 2.7e-13 80.5 365 29.6
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 2.7e-13 80.5 310 29.7
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 3.6e-13 80.1 323 32.2
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 3.6e-13 80.1 371 27.8
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 4.7e-13 79.7 400 26.8
Sed0021237 Sechium edule HOM05D002977 ORTHO05D003225 8.0e-13 79.0 357 32.5
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 1.8e-12 77.8 400 26.8
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 1.8e-12 77.8 400 26.8
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 2.3e-12 77.4 370 25.4
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 4.0e-12 76.6 371 24.5
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 8.8e-12 75.5 358 25.7
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 1.5e-11 74.7 280 31.1
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 5.7e-11 72.8 239 36.4
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 5.7e-11 72.8 316 25.9
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 9.8e-11 72.0 216 28.7
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 2.2e-10 70.9 320 30.0
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 6.3e-10 69.3 389 28.0
ECA233G2885 Erigeron canadensis HOM05D002977 ORTHO05D003225 8.3e-10 68.9 191 27.7
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 1.1e-09 68.6 282 31.6
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 1.4e-09 68.2 397 26.4
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 1.8e-09 67.8 219 28.3
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 2.4e-09 67.4 204 28.4
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 5.4e-09 66.2 353 25.2
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 7.0e-09 65.9 238 29.0
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 7.0e-09 65.9 371 24.0
Hma1.2p1_0371F.1_g138190 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 7.0e-09 65.9 156 30.8
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 2.0e-08 64.3 429 24.2
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 2.7e-08 63.9 227 30.0
SGA_v2.0_scaffold286G47104 Striga asiatica HOM05D002977 ORTHO05D003225 4.5e-08 63.2 151 31.1
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 1.7e-07 61.2 373 24.7
DCAR_006762 Daucus carota HOM05D002977 ORTHO05D003225 2.9e-07 60.5 207 27.1
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 3.8e-07 60.1 287 31.4
VMungo1215G3066 Vigna mungo HOM05D002977 ORTHO05D003225 6.5e-07 59.3 136 33.1
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 8.5e-07 58.9 350 24.6
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 8.5e-07 58.9 374 25.9
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 8.5e-07 58.9 293 29.7
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 8.5e-07 58.9 382 24.1
Carub.0006s3643 Capsella rubella HOM05D002977 ORTHO05D003225 1.5e-06 58.2 299 30.1
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 1.5e-06 58.2 208 27.9
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 1.9e-06 57.8 348 23.6
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 2.5e-06 57.4 166 25.9
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 2.5e-06 57.4 213 30.0
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.5e-06 57.4 228 23.7
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 2.5e-06 57.4 380 22.6
Lsat_1_v5_gn_6_13021 Lactuca sativa HOM05D002977 ORTHO05D003225 4.2e-06 56.6 122 30.3
AUR62033369 Chenopodium quinoa HOM05D049868 ORTHO05D003225 7.2e-06 55.8 322 25.8
HanXRQChr07g0188421 Helianthus annuus HOM05D002977 ORTHO05D003225 9.5e-06 55.5 118 28.0


User provided reference genes

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