Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006901 Daucus carota HOM05D008009 ORTHO05D010177 2.9e-149 531.9 279 100.0
Peaxi162Scf00021g00312 Petunia axillaris HOM05D008009 ORTHO05D010177 3.5e-99 365.5 262 69.8
CAN.G170.56 Capsicum annuum HOM05D008009 ORTHO05D010177 3.9e-98 362.1 263 70.3
MSTRG.17230 Avicennia marina HOM05D008009 ORTHO05D010177 1.5e-94 350.1 258 69.8
PGSC0003DMG400000002 Solanum tuberosum HOM05D008009 ORTHO05D010177 1.5e-94 350.1 262 67.6
Cc02_g37180 Coffea canephora HOM05D008009 ORTHO05D010177 3.4e-94 349.0 273 65.2
Sopen01g037620 Solanum pennellii HOM05D008009 ORTHO05D010177 3.4e-94 349.0 263 67.3
Solyc01g091850.3 Solanum lycopersicum HOM05D008009 ORTHO05D010177 4.5e-94 348.6 262 67.9
Migut.B01680 Erythranthe guttata HOM05D008009 ORTHO05D010177 1.9e-92 343.2 238 73.1
ECA236G3590 Erigeron canadensis HOM05D008009 ORTHO05D010177 2.5e-92 342.8 275 68.0
QL08p050750 Quercus lobata HOM05D008009 ORTHO05D010177 2.5e-92 342.8 269 66.5
Cfa021163 Carpinus fangiana HOM05D008009 ORTHO05D010177 4.2e-92 342.0 252 69.0
PGR042G1113 Punica granatum HOM05D008009 ORTHO05D010177 4.2e-92 342.0 268 66.0
SalBow3G1346 Salvia bowleyana HOM05D008009 ORTHO05D010177 7.1e-92 341.3 238 72.3
GSVIVG01027596001 Vitis vinifera HOM05D008009 ORTHO05D010177 1.2e-91 340.5 264 67.0
Haze_15234 Corylus avellana HOM05D008009 ORTHO05D010177 2.7e-91 339.3 252 68.3
Cfa004175 Carpinus fangiana HOM05D008009 ORTHO05D010177 3.5e-91 339.0 252 68.3
SGA_v2.0_scaffold95G28877 Striga asiatica HOM05D008009 ORTHO05D010177 7.9e-91 337.8 266 67.7
Potri.014G077600 Populus trichocarpa HOM05D008009 ORTHO05D010177 3.0e-90 335.9 270 65.6
CANSAT56G2363 Cannabis sativa HOM05D008009 ORTHO05D010177 6.7e-90 334.7 245 69.4
Dinv43752 Davidia involucrata HOM05D008009 ORTHO05D010177 6.7e-90 334.7 245 73.1
HanXRQChr06g0169381 Helianthus annuus HOM05D008009 ORTHO05D010177 6.7e-90 334.7 268 66.8
Eucgr.E00219 Eucalyptus grandis HOM05D008009 ORTHO05D010177 8.7e-90 334.3 245 68.2
Actinidia27148 Actinidia chinensis HOM05D008009 ORTHO05D010177 3.3e-89 332.4 265 64.9
RcHm_v2.0_Chr1g0352071 Rosa chinensis HOM05D008009 ORTHO05D010177 1.6e-88 330.1 269 65.1
Lsat_1_v5_gn_7_8101 Lactuca sativa HOM05D008009 ORTHO05D010177 2.1e-88 329.7 278 64.7
FAN01G0151 Fragaria x ananassa HOM05D008009 ORTHO05D010177 4.8e-88 328.6 257 67.3
FAN06G2831 Fragaria x ananassa HOM05D008009 ORTHO05D010177 8.2e-88 327.8 257 67.7
FvH4_7g12940 Fragaria vesca HOM05D008009 ORTHO05D010177 1.4e-87 327.0 257 67.7
FAN06G1824 Fragaria x ananassa HOM05D008009 ORTHO05D010177 2.4e-87 326.2 257 67.3
FAN10G4026 Fragaria x ananassa HOM05D008009 ORTHO05D010177 3.1e-87 325.9 275 63.3
Nitab4.5_0009025g0020 Nicotiana tabacum HOM05D002524 ORTHO05D002718 2.6e-86 322.8 262 66.8
Aqoxy5G03972 Aquilegia oxysepala HOM05D008009 ORTHO05D010177 1.3e-85 320.5 256 66.8
unitig_0.g1290 Utricularia gibba HOM05D008009 ORTHO05D010177 5.0e-85 318.5 254 66.1
Atru.chr5.397 Acer truncatum HOM05D008009 ORTHO05D010177 5.5e-84 315.1 272 64.0
Atru.chr5.391 Acer truncatum HOM05D008009 ORTHO05D010177 9.3e-84 314.3 272 63.6
FAN03G0554 Fragaria x ananassa HOM05D008009 ORTHO05D010177 6.1e-83 311.6 279 61.6
arahy.Tifrunner.gnm1.ann1.RW66HN Arachis hypogaea HOM05D008009 ORTHO05D010177 5.7e-81 305.1 236 64.4
Nitab4.5_0006706g0010 Nicotiana tabacum HOM05D008009 ORTHO05D010177 1.8e-79 300.1 239 68.2
Medtr7g076320 Medicago truncatula HOM05D008009 ORTHO05D010177 5.3e-79 298.5 243 59.7
Glyma.18G228200 Glycine max HOM05D008009 ORTHO05D010177 6.9e-79 298.1 271 57.2
Lj1g0026011 Lotus japonicus HOM05D008009 ORTHO05D010177 6.9e-79 298.1 269 57.2
SEGI_40209 Sequoiadendron giganteum HOM05D008009 ORTHO05D010177 9.1e-79 297.7 239 60.3
Nn6g34273 Nelumbo nucifera HOM05D008009 ORTHO05D010177 4.5e-78 295.4 249 61.4
Phvul.008G070000 Phaseolus vulgaris HOM05D008009 ORTHO05D010177 4.5e-78 295.4 271 56.5
Ca_07869_v3 Cicer arietinum L. HOM05D008009 ORTHO05D010177 1.7e-77 293.5 265 57.0
Ca_29748_v3 Cicer arietinum L. HOM05D008009 ORTHO05D010177 1.7e-77 293.5 265 57.0
Psat3g112360 Pisum sativum HOM05D008009 ORTHO05D010177 2.2e-77 293.1 236 60.6
VMungo1383G2711 Vigna mungo HOM05D008009 ORTHO05D010177 2.9e-77 292.7 248 59.3
FAN10G1597 Fragaria x ananassa HOM05D008009 ORTHO05D010177 2.7e-75 286.2 278 57.9
Nitab4.5_0012175g0010 Nicotiana tabacum HOM05D002524 ORTHO05D002718 7.4e-73 278.1 211 66.8
Hma1.2p1_0033F.1_g020690 Hydrangea macrophylla HOM05D008009 ORTHO05D010177 4.8e-72 275.4 199 67.8
AUR62004286 Chenopodium quinoa HOM05D008009 ORTHO05D010177 4.1e-71 272.3 201 66.7
AUR62033371 Chenopodium quinoa HOM05D008009 ORTHO05D010177 4.1e-71 272.3 201 66.2
EL10Ac1g00970 Beta vulgaris HOM05D008009 ORTHO05D010177 2.6e-70 269.6 258 57.4
Prupe.2G153700 Prunus persica HOM05D008009 ORTHO05D010177 3.4e-70 269.2 200 70.5
TPR.G37743 Trifolium pratense HOM05D008009 ORTHO05D010177 1.0e-69 267.7 249 54.6
COL.COLO4_12632 Corchorus olitorius HOM05D008009 ORTHO05D010177 1.8e-63 246.9 239 56.1
Pp3c16_7270 Physcomitrium patens HOM05D008009 ORTHO05D010177 7.7e-62 241.5 233 51.5
Gorai.004G156000 Gossypium raimondii HOM05D008009 ORTHO05D010177 1.0e-61 241.1 260 50.8
Gohir.D08G150200 Gossypium hirsutum HOM05D008009 ORTHO05D010177 3.8e-61 239.2 260 50.8
Pp3c25_40 Physcomitrium patens HOM05D008009 ORTHO05D010177 9.4e-60 234.6 231 50.6
arahy.Tifrunner.gnm1.ann1.EX28FW Arachis hypogaea HOM05D008009 ORTHO05D010177 2.0e-57 226.9 180 61.1
Gohir.A08G129000 Gossypium hirsutum HOM05D008009 ORTHO05D010177 5.7e-57 225.3 267 47.2
Mapoly0089s0055 Marchantia polymorpha HOM05D008009 ORTHO05D010177 1.1e-55 221.1 243 47.3
Ah.05g175960 Amaranthus hybridus HOM05D008009 ORTHO05D010177 1.9e-52 210.3 190 59.5
MCO11G458 Micromonas commoda HOM05D008009 ORTHO05D010177 2.1e-51 206.8 227 43.2
Duzib133G0776 Durio zibethinus HOM05D008009 ORTHO05D010177 8.8e-50 201.4 176 58.5
CiPaw.01G052300 Carya illinoinensis HOM05D008009 ORTHO05D010177 2.7e-46 189.9 268 45.9
Nn4g22699 Nelumbo nucifera HOM05D008009 ORTHO05D010177 3.8e-37 159.5 129 60.5
PRCOL_00006926 Prasinoderma coloniale HOM05D008009 ORTHO05D010177 2.5e-36 156.8 229 35.8
MBI12_g11808_MAGBIO Magnolia biondii HOM05D008009 ORTHO05D010177 7.5e-33 145.2 106 71.7
Thecc.01G369500 Theobroma cacao HOM05D008009 ORTHO05D010177 1.1e-23 114.8 249 36.1
SEGI_11444 Sequoiadendron giganteum HOM05D008009 ORTHO05D010177 1.1e-15 88.2 71 60.6
SGA_v2.0_scaffold23G10159 Striga asiatica HOM05D003797 ORTHO05D004370 1.0e-13 81.6 216 27.3
CSS0047498 Camellia sinensis var. sinensis HOM05D003797 ORTHO05D004370 2.5e-12 77.0 216 27.3
Migut.E00497 Erythranthe guttata HOM05D003797 ORTHO05D004370 2.5e-12 77.0 235 26.0
Eucgr.B02691 Eucalyptus grandis HOM05D003797 ORTHO05D004370 9.5e-12 75.1 217 26.7
Oeu006298.1 Olea europaea HOM05D003797 ORTHO05D004370 9.5e-12 75.1 216 25.9
Dinv26370 Davidia involucrata HOM05D003797 ORTHO05D004370 1.2e-11 74.7 216 26.9
Ah.09g234580 Amaranthus hybridus HOM05D003797 ORTHO05D004370 2.1e-11 73.9 219 27.9
Rhsim09G0088200 Rhododendron simsii HOM05D003797 ORTHO05D004370 2.1e-11 73.9 216 26.9
Duzib248G0263 Durio zibethinus HOM05D003797 ORTHO05D004370 2.8e-11 73.6 216 26.4
Atru.chr11.843 Acer truncatum HOM05D003797 ORTHO05D004370 3.6e-11 73.2 219 28.8
Atru.chr11.849 Acer truncatum HOM05D003797 ORTHO05D004370 3.6e-11 73.2 219 28.8
Duzib251G0065 Durio zibethinus HOM05D003797 ORTHO05D004370 3.6e-11 73.2 244 25.4
QL03p037712 Quercus lobata HOM05D003797 ORTHO05D004370 3.6e-11 73.2 219 27.4
Thecc.02G307900 Theobroma cacao HOM05D003797 ORTHO05D004370 3.6e-11 73.2 239 24.3
Actinidia36612 Actinidia chinensis HOM05D003797 ORTHO05D004370 4.7e-11 72.8 216 25.9
Hma1.2p1_0033F.1_g020670 Hydrangea macrophylla HOM05D008009 ORTHO05D010177 4.7e-11 72.8 71 60.6
Glyma.05G240600 Glycine max HOM05D003797 ORTHO05D004370 6.2e-11 72.4 216 25.5
PGR142G2609 Punica granatum HOM05D003797 ORTHO05D004370 8.1e-11 72.0 222 25.2
Atru.chr11.837 Acer truncatum HOM05D003797 ORTHO05D004370 1.1e-10 71.6 217 26.7
MELO3C005260.2 Cucumis melo HOM05D003797 ORTHO05D004370 1.1e-10 71.6 222 28.8
DCAR_023568 Daucus carota HOM05D003797 ORTHO05D004370 1.1e-10 71.6 216 25.9
VMungo0251G2898 Vigna mungo HOM05D003797 ORTHO05D004370 1.1e-10 71.6 216 25.9
Glyma.08G047500 Glycine max HOM05D003797 ORTHO05D004370 1.4e-10 71.2 219 26.5
Ah.14g087870 Amaranthus hybridus HOM05D003797 ORTHO05D004370 1.8e-10 70.9 219 26.9
CsaV3_5G027930 Cucumis sativus L. HOM05D003797 ORTHO05D004370 1.8e-10 70.9 222 27.9
ECA234G4680 Erigeron canadensis HOM05D003797 ORTHO05D004370 1.8e-10 70.9 216 26.4
Manes.15G136600 Manihot esculenta HOM05D003797 ORTHO05D004370 1.8e-10 70.9 216 26.4
Nitab4.5_0003619g0020 Nicotiana tabacum HOM05D003797 ORTHO05D004370 1.8e-10 70.9 236 24.2
Nitab4.5_0002414g0010 Nicotiana tabacum HOM05D003797 ORTHO05D004370 2.4e-10 70.5 236 24.6
ATR0118G024 Amborella trichopoda HOM05D003797 ORTHO05D004370 4.0e-10 69.7 218 24.8
CANSAT78G1947 Cannabis sativa HOM05D003797 ORTHO05D004370 4.0e-10 69.7 220 28.2
FAN12G2011 Fragaria x ananassa HOM05D003797 ORTHO05D004370 4.0e-10 69.7 237 27.0
FAN17G0483 Fragaria x ananassa HOM05D003797 ORTHO05D004370 4.0e-10 69.7 220 26.8
HanXRQChr17g0565981 Helianthus annuus HOM05D003797 ORTHO05D004370 4.0e-10 69.7 216 25.9
Lalb_Chr05g0222091 Lupinus albus HOM05D003797 ORTHO05D004370 4.0e-10 69.7 219 26.9
PGR102G0637 Punica granatum HOM05D003797 ORTHO05D004370 4.0e-10 69.7 241 24.9
Prupe.1G335300 Prunus persica HOM05D003797 ORTHO05D004370 5.2e-10 69.3 220 26.8
QL03p037918 Quercus lobata HOM05D003797 ORTHO05D004370 5.2e-10 69.3 241 25.3
CiPaw.06G054800 Carya illinoinensis HOM05D003797 ORTHO05D004370 6.8e-10 68.9 247 25.1
Eucgr.G02084 Eucalyptus grandis HOM05D003797 ORTHO05D004370 6.8e-10 68.9 252 25.0
Sabra10G0076600 Salix brachista HOM05D003797 ORTHO05D004370 6.8e-10 68.9 216 26.9
FAN07G2428 Fragaria x ananassa HOM05D003797 ORTHO05D004370 8.9e-10 68.6 220 27.3
RcHm_v2.0_Chr4g0442571 Rosa chinensis HOM05D003797 ORTHO05D004370 8.9e-10 68.6 220 27.3
PSO384G3089 Papaver somniferum HOM05D003797 ORTHO05D004370 1.2e-09 68.2 219 27.9
FAN22G0305 Fragaria x ananassa HOM05D003797 ORTHO05D004370 1.5e-09 67.8 220 26.8
COL.COLO4_27614 Corchorus olitorius HOM05D003797 ORTHO05D004370 2.6e-09 67.0 223 24.7
Lj3A863T39 Lonicera japonica HOM05D003797 ORTHO05D004370 5.8e-09 65.9 254 23.2
Nn3g18417 Nelumbo nucifera HOM05D003797 ORTHO05D004370 7.6e-09 65.5 248 23.0
Sed0023787 Sechium edule HOM05D003797 ORTHO05D004370 9.9e-09 65.1 222 26.6
SMO347G0454 Selaginella moellendorffii HOM05D002473 ORTHO05D002666 4.9e-08 62.8 245 24.5
Cfa015046 Carpinus fangiana HOM05D003797 ORTHO05D004370 8.4e-08 62.0 242 24.4
DCAR_016699 Daucus carota HOM05D000981 ORTHO05D000845 8.4e-08 62.0 257 24.1
GSVIVG01011628001 Vitis vinifera HOM05D003797 ORTHO05D004370 1.1e-07 61.6 215 23.7
Aqoxy3G04068 Aquilegia oxysepala HOM05D003797 ORTHO05D004370 1.4e-07 61.2 216 24.1
SHI04334 Sapria himalayana HOM05D003797 ORTHO05D004370 3.2e-07 60.1 234 23.1
AagrBONN_evm.TU.Sc2ySwM_344.4715 Anthoceros agrestis HOM05D000981 ORTHO05D000845 5.4e-07 59.3 249 23.7
Prupe.7G188300 Prunus persica HOM05D000981 ORTHO05D000845 1.2e-06 58.2 244 22.1
TWI34G1163 Tripterygium wilfordii HOM05D000981 ORTHO05D000845 2.1e-06 57.4 241 24.9
Pp3c20_1770 Physcomitrium patens HOM05D000981 ORTHO05D000845 3.5e-06 56.6 222 26.1
ClCG01G006640 Citrullus lanatus HOM05D003797 ORTHO05D004370 6.0e-06 55.8 222 24.3
HanXRQChr15g0484141 Helianthus annuus HOM05D000981 ORTHO05D000845 6.0e-06 55.8 235 23.0


User provided reference genes

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