Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006764 Daucus carota HOM05D005805 ORTHO05D007226 1.4e-127 459.9 279 100.0
DCAR_017358 Daucus carota HOM05D000329 ORTHO05D000833 6.1e-59 231.9 174 93.1
CSS0012055 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 2.1e-35 153.7 206 50.5
Lj2A197T60 Lonicera japonica HOM05D005805 ORTHO05D007226 2.6e-33 146.7 170 51.8
Dinv37696 Davidia involucrata HOM05D005805 ORTHO05D007226 2.2e-32 143.7 165 53.3
CSS0001301 Camellia sinensis var. sinensis HOM05D005805 ORTHO05D007226 3.7e-32 142.9 169 53.8
Migut.A00918 Erythranthe guttata HOM05D005805 ORTHO05D007226 8.3e-32 141.7 157 53.5
CAN.G981.40 Capsicum annuum HOM05D005805 ORTHO05D007226 1.8e-31 140.6 167 49.7
Actinidia14511 Actinidia chinensis HOM05D005805 ORTHO05D007226 3.2e-31 139.8 165 51.5
Actinidia02051 Actinidia chinensis HOM05D005805 ORTHO05D007226 1.2e-30 137.9 165 51.5
TAR629G3121 Trochodendron aralioides HOM05D005805 ORTHO05D007226 2.7e-30 136.7 170 50.0
Cfa012095 Carpinus fangiana HOM05D005805 ORTHO05D007226 3.5e-30 136.3 162 48.8
Haze_08957 Corylus avellana HOM05D005805 ORTHO05D007226 3.5e-30 136.3 162 48.8
Cc08_g13930 Coffea canephora HOM05D005805 ORTHO05D007226 4.6e-30 136.0 165 49.7
Sed0020250 Sechium edule HOM05D005805 ORTHO05D007226 5.9e-30 135.6 164 48.8
Phvul.002G153800 Phaseolus vulgaris HOM05D005805 ORTHO05D007226 7.8e-30 135.2 117 60.7
Potri.003G120900 Populus trichocarpa HOM05D005805 ORTHO05D007226 7.8e-30 135.2 161 49.7
TAR375G0540 Trochodendron aralioides HOM05D005805 ORTHO05D007226 7.8e-30 135.2 165 50.3
Sopen08g028610 Solanum pennellii HOM05D005805 ORTHO05D007226 1.0e-29 134.8 147 51.7
PGSC0003DMG400022755 Solanum tuberosum HOM05D005805 ORTHO05D007226 1.0e-29 134.8 139 54.0
CANSAT21G1670 Cannabis sativa HOM05D005805 ORTHO05D007226 3.0e-29 133.3 167 49.1
CiPaw.12G099000 Carya illinoinensis HOM05D005805 ORTHO05D007226 3.0e-29 133.3 164 47.0
PGR031G2899 Punica granatum HOM05D005805 ORTHO05D007226 3.0e-29 133.3 184 44.6
TPR.G6662 Trifolium pratense HOM05D005805 ORTHO05D007226 3.0e-29 133.3 114 60.5
Ca_06662_v3 Cicer arietinum L. HOM05D005805 ORTHO05D007226 3.9e-29 132.9 118 59.3
Oeu031590.1 Olea europaea HOM05D005805 ORTHO05D007226 3.9e-29 132.9 125 55.2
Hma1.2p1_0371F.1_g138200 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 5.0e-29 132.5 131 56.5
VMungo1215G3124 Vigna mungo HOM05D005805 ORTHO05D007226 1.1e-28 131.3 119 59.7
Glyma.01G215800 Glycine max HOM05D005805 ORTHO05D007226 1.5e-28 131.0 166 47.6
Glyma.11G026600 Glycine max HOM05D005805 ORTHO05D007226 1.5e-28 131.0 166 48.2
QL12p017075 Quercus lobata HOM05D005805 ORTHO05D007226 2.5e-28 130.2 162 46.3
Thecc.03G270600 Theobroma cacao HOM05D005805 ORTHO05D007226 2.5e-28 130.2 128 54.7
Atru.chr9.1535 Acer truncatum HOM05D005805 ORTHO05D007226 5.6e-28 129.0 154 48.7
Medtr5g010950 Medicago truncatula HOM05D005805 ORTHO05D007226 9.5e-28 128.3 122 57.4
Prupe.5G089600 Prunus persica HOM05D005805 ORTHO05D007226 9.5e-28 128.3 155 49.0
Sabra01G0084700 Salix brachista HOM05D005805 ORTHO05D007226 9.5e-28 128.3 183 45.9
Nitab4.5_0009882g0030 Nicotiana tabacum HOM05D005805 ORTHO05D007226 1.6e-27 127.5 138 51.4
GSVIVG01019866001 Vitis vinifera HOM05D005805 ORTHO05D007226 1.6e-27 127.5 173 48.6
Nitab4.5_0001714g0200 Nicotiana tabacum HOM05D005805 ORTHO05D007226 2.1e-27 127.1 131 53.4
Ciclev10020090m.g Citrus clementina HOM05D005805 ORTHO05D007226 3.6e-27 126.3 163 48.5
FAN04G0223 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.6e-27 126.3 161 49.1
FAN08G1094 Fragaria x ananassa HOM05D005805 ORTHO05D007226 3.6e-27 126.3 161 49.1
HanXRQChr02g0048701 Helianthus annuus HOM05D005805 ORTHO05D007226 3.6e-27 126.3 166 46.4
Peaxi162Scf00620g00920 Petunia axillaris HOM05D005805 ORTHO05D007226 4.7e-27 125.9 153 46.4
MELO3C005626.2 Cucumis melo HOM05D005805 ORTHO05D007226 6.2e-27 125.6 144 49.3
MBI04_g40844_MAGBIO Magnolia biondii HOM05D005805 ORTHO05D007226 6.2e-27 125.6 190 44.7
unitig_8.g3899 Utricularia gibba HOM05D005805 ORTHO05D007226 6.2e-27 125.6 151 45.7
FAN13G0947 Fragaria x ananassa HOM05D005805 ORTHO05D007226 8.0e-27 125.2 161 48.4
HanXRQChr07g0188541 Helianthus annuus HOM05D005805 ORTHO05D007226 8.0e-27 125.2 112 58.0
Eucgr.D01927 Eucalyptus grandis HOM05D005805 ORTHO05D007226 1.1e-26 124.8 183 43.7
FvH4_5g01420 Fragaria vesca HOM05D005805 ORTHO05D007226 1.1e-26 124.8 161 48.4
Aqoxy7G00467 Aquilegia oxysepala HOM05D005805 ORTHO05D007226 1.4e-26 124.4 164 46.3
Lalb_Chr16g0379971 Lupinus albus HOM05D005805 ORTHO05D007226 2.3e-26 123.6 210 42.4
arahy.Tifrunner.gnm1.ann1.8FZ8QS Arachis hypogaea HOM05D005805 ORTHO05D007226 3.1e-26 123.2 119 56.3
Nn1g01331 Nelumbo nucifera HOM05D005805 ORTHO05D007226 3.1e-26 123.2 165 47.3
Potri.001G111100 Populus trichocarpa HOM05D005805 ORTHO05D007226 4.0e-26 122.9 176 45.5
Sc01g0008800 Simmondsia chinensis HOM05D005805 ORTHO05D007226 4.0e-26 122.9 271 41.7
Lsat_1_v5_gn_6_12941 Lactuca sativa HOM05D005805 ORTHO05D007226 5.2e-26 122.5 162 46.9
Lj2g0007037 Lotus japonicus HOM05D005805 ORTHO05D007226 5.2e-26 122.5 127 55.1
ClCG01G003160 Citrullus lanatus HOM05D005805 ORTHO05D007226 6.8e-26 122.1 165 44.8
Lalb_Chr05g0214771 Lupinus albus HOM05D005805 ORTHO05D007226 6.8e-26 122.1 148 48.0
MD06G1071900 Malus domestica HOM05D005805 ORTHO05D007226 6.8e-26 122.1 139 51.8
Oeu001898.3 Olea europaea HOM05D005805 ORTHO05D007226 6.8e-26 122.1 124 51.6
FAN18G3929 Fragaria x ananassa HOM05D005805 ORTHO05D007226 8.9e-26 121.7 161 47.8
TWI81G0996 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 1.5e-25 120.9 115 56.5
CiPaw.11G141700 Carya illinoinensis HOM05D005805 ORTHO05D007226 2.6e-25 120.2 116 52.6
Solyc08g080260.4 Solanum lycopersicum HOM05D005805 ORTHO05D007226 2.6e-25 120.2 166 46.4
Cpa.g.sc29.9 Carica papaya HOM05D005805 ORTHO05D007226 3.4e-25 119.8 184 41.8
Dinv39015 Davidia involucrata HOM05D005805 ORTHO05D007226 7.5e-25 118.6 129 52.7
vmacro00648 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 7.5e-25 118.6 126 52.4
A02p25990 Brassica napus HOM05D005805 ORTHO05D007226 1.7e-24 117.5 164 43.9
BraA02t07597Z Brassica rapa HOM05D005805 ORTHO05D007226 1.7e-24 117.5 164 43.9
Gohir.D03G155100 Gossypium hirsutum HOM05D005805 ORTHO05D007226 2.2e-24 117.1 158 44.9
Gorai.003G162800 Gossypium raimondii HOM05D005805 ORTHO05D007226 2.2e-24 117.1 158 44.9
Duzib068G1011 Durio zibethinus HOM05D005805 ORTHO05D007226 2.9e-24 116.7 143 46.9
MD04G1068600 Malus domestica HOM05D005805 ORTHO05D007226 2.9e-24 116.7 137 49.6
ECA233G3280 Erigeron canadensis HOM05D005805 ORTHO05D007226 8.3e-24 115.2 67 77.6
BraA09t38298Z Brassica rapa HOM05D005805 ORTHO05D007226 1.1e-23 114.8 145 48.3
Gorai.004G207600 Gossypium raimondii HOM05D005805 ORTHO05D007226 1.9e-23 114.0 116 51.7
BcaB05g23807 Brassica carinata HOM05D005805 ORTHO05D007226 2.4e-23 113.6 138 46.4
Psat2g181520 Pisum sativum HOM05D005805 ORTHO05D007226 5.4e-23 112.5 68 72.1
AT4G11790 Arabidopsis thaliana HOM05D005805 ORTHO05D007226 1.6e-22 110.9 110 55.5
A09p27320 Brassica napus HOM05D005805 ORTHO05D007226 2.7e-22 110.2 144 46.5
Zm00001eb073520 Zea mays HOM05D005805 ORTHO05D007226 4.6e-22 109.4 118 50.0
RcHm_v2.0_Chr7g0199441 Rosa chinensis HOM05D005805 ORTHO05D007226 7.8e-22 108.6 165 43.0
AL6G46500 Arabidopsis lyrata HOM05D005805 ORTHO05D007226 1.0e-21 108.2 147 45.6
Thhalv10028709m.g Eutrema salsugineum HOM05D005805 ORTHO05D007226 1.0e-21 108.2 151 45.0
CDE11G0359 Ceratophyllum demersum HOM05D005805 ORTHO05D007226 1.3e-21 107.8 153 41.2
THA.LOC104814292 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 1.3e-21 107.8 115 51.3
Gohir.A03G015238 Gossypium hirsutum HOM05D005805 ORTHO05D007226 1.7e-21 107.5 158 43.0
Sp6g05660 Schrenkiella parvula HOM05D005805 ORTHO05D007226 1.7e-21 107.5 121 47.9
C09p34650 Brassica napus HOM05D005805 ORTHO05D007226 2.3e-21 107.1 144 45.1
BolC9t56310H Brassica oleracea HOM05D005805 ORTHO05D007226 2.3e-21 107.1 144 45.1
THA.LOC104806368 Tarenaya hassleriana HOM05D005805 ORTHO05D007226 2.3e-21 107.1 185 39.5
Duzib205G1286 Durio zibethinus HOM05D005805 ORTHO05D007226 5.0e-21 105.9 156 44.2
TWI60G0251 Tripterygium wilfordii HOM05D005805 ORTHO05D007226 5.0e-21 105.9 158 44.3
ATR0757G009 Amborella trichopoda HOM05D005805 ORTHO05D007226 6.6e-21 105.5 120 47.5
SalBow6G0943 Salvia bowleyana HOM05D005805 ORTHO05D007226 6.6e-21 105.5 197 39.1
CARHR254520 Cardamine hirsuta HOM05D005805 ORTHO05D007226 8.6e-21 105.1 93 54.8
Aa31LG9G10640 Aethionema arabicum HOM05D005805 ORTHO05D007226 2.5e-20 103.6 143 43.4
PSO782G3262 Papaver somniferum HOM05D005805 ORTHO05D007226 4.3e-20 102.8 122 47.5
Ah.02g116420 Amaranthus hybridus HOM05D005805 ORTHO05D007226 7.3e-20 102.1 132 47.0
Carub.0006s3090 Capsella rubella HOM05D005805 ORTHO05D007226 7.3e-20 102.1 180 39.4
Manes.01G068001 Manihot esculenta HOM05D005805 ORTHO05D007226 7.3e-20 102.1 126 48.4
Os03g0667700 Oryza sativa ssp. japonica HOM05D005805 ORTHO05D007226 7.3e-20 102.1 103 50.5
PSO478G0076 Papaver somniferum HOM05D005805 ORTHO05D007226 7.3e-20 102.1 85 57.6
Hund28361 Selenicereus undatus HOM05D005805 ORTHO05D007226 1.2e-19 101.3 87 56.3
Hund28365 Selenicereus undatus HOM05D005805 ORTHO05D007226 1.2e-19 101.3 87 56.3
HPP92_020989 Vanilla planifolia HOM05D005805 ORTHO05D007226 1.6e-19 100.9 76 61.8
Duzib084G0260 Durio zibethinus HOM05D005805 ORTHO05D007226 2.8e-19 100.1 162 42.6
COL.COLO4_05274 Corchorus olitorius HOM05D005805 ORTHO05D007226 3.6e-19 99.8 61 75.4
EL10Ac5g12722 Beta vulgaris HOM05D005805 ORTHO05D007226 6.2e-19 99.0 142 41.5
arahy.Tifrunner.gnm1.ann1.J6ALFQ Arachis hypogaea HOM05D005805 ORTHO05D007226 1.1e-18 98.2 159 42.1
AUR62010661 Chenopodium quinoa HOM05D005805 ORTHO05D007226 1.1e-18 98.2 124 44.4
AUR62017300 Chenopodium quinoa HOM05D005805 ORTHO05D007226 1.1e-18 98.2 114 47.4
Hma1.2p1_0002F.1_g002590 Hydrangea macrophylla HOM05D005805 ORTHO05D007226 3.1e-18 96.7 63 69.8
BcaB01g01678 Brassica carinata HOM05D005805 ORTHO05D007226 8.9e-18 95.1 124 46.8
Ah.12g057730 Amaranthus hybridus HOM05D005805 ORTHO05D007226 1.7e-16 90.9 147 39.5
CBR_g49019 Chara braunii HOM05D005805 ORTHO05D007226 2.2e-16 90.5 70 55.7
CsaV3_5G003280 Cucumis sativus L. HOM05D005805 ORTHO05D007226 1.2e-14 84.7 94 52.1
SGA_v2.0_scaffold60G20821 Striga asiatica HOM05D011763 ORTHO05D014257 1.0e-13 81.6 108 45.4
Sed0020925 Sechium edule HOM05D005805 ORTHO05D007226 2.3e-13 80.5 96 46.9
AagrBONN_evm.TU.Sc2ySwM_344.4489 Anthoceros agrestis HOM05D005805 ORTHO05D007226 2.5e-12 77.0 100 44.0
vmacro10803 Vaccinium macrocarpon HOM05D005805 ORTHO05D007226 5.6e-12 75.9 144 37.5
Gohir.A08G178400 Gossypium hirsutum HOM05D005805 ORTHO05D007226 9.5e-12 75.1 184 34.2
C02p41470 Brassica napus HOM05D005805 ORTHO05D007226 5.2e-10 69.3 109 37.6
BcaC03g16328 Brassica carinata HOM05D005805 ORTHO05D007226 2.0e-09 67.4 97 40.2


User provided reference genes

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