Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 0.0e+00 1376.7 718 100.0
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 1.8e-288 995.7 735 68.7
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 1.9e-285 985.7 747 66.5
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 1.6e-284 982.6 746 69.2
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 2.1e-276 955.7 612 75.2
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 3.5e-268 928.3 598 73.4
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 3.3e-266 921.8 713 67.6
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 1.8e-264 916.0 783 60.2
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 2.0e-263 912.5 813 61.4
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 2.6e-263 912.1 782 60.2
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 5.8e-263 911.0 608 73.4
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 6.4e-262 907.5 714 65.5
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 1.6e-260 902.9 713 68.4
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 6.0e-260 901.0 710 65.1
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 7.9e-260 900.6 725 65.2
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 7.9e-260 900.6 777 60.9
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 1.7e-259 899.4 800 58.2
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 7.4e-258 894.0 600 71.5
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 1.3e-257 893.3 630 69.0
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 3.6e-257 891.7 590 71.5
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 7.6e-255 884.0 594 71.2
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 1.3e-254 883.2 697 65.0
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 1.7e-254 882.9 599 71.6
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 2.9e-254 882.1 613 69.5
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 6.4e-254 880.9 622 68.8
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 8.4e-254 880.6 773 62.6
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 1.4e-253 879.8 714 62.3
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 2.4e-253 879.0 733 60.4
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 1.6e-252 876.3 588 70.4
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 2.1e-252 875.9 595 70.3
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 2.7e-252 875.5 638 68.3
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 6.0e-252 874.4 893 55.0
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 7.9e-252 874.0 782 60.2
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 1.3e-251 873.2 600 70.2
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 1.6e-249 866.3 747 59.6
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 2.1e-249 865.9 600 69.8
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 8.1e-249 864.0 751 59.9
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 2.0e-247 859.4 622 65.9
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 7.6e-247 857.4 612 66.8
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 1.7e-246 856.3 622 65.8
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 1.7e-246 856.3 611 68.2
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 7.1e-245 850.9 729 60.9
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.8e-243 846.3 601 67.2
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 2.3e-243 845.9 609 68.0
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 6.7e-243 844.3 616 66.4
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 8.7e-243 844.0 688 66.7
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 1.1e-242 843.6 602 67.3
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 1.5e-242 843.2 635 65.5
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 2.5e-242 842.4 602 67.4
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 1.6e-241 839.7 663 64.7
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 2.1e-241 839.3 597 67.2
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 4.8e-241 838.2 603 66.5
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 1.7e-238 829.7 623 64.2
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 8.5e-238 827.4 603 65.5
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 2.5e-237 825.9 597 68.2
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 3.2e-237 825.5 619 64.3
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 4.3e-234 815.1 587 68.1
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 2.4e-232 809.3 622 64.6
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 1.3e-230 803.5 598 64.7
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 2.5e-229 799.3 598 64.5
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 7.9e-228 794.3 582 65.1
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 1.0e-227 793.9 517 72.7
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 6.7e-227 791.2 537 72.3
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 8.8e-227 790.8 730 58.9
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 4.4e-226 788.5 591 64.3
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.1e-224 783.9 741 57.8
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 1.8e-224 783.1 520 69.4
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 1.8e-224 783.1 539 70.5
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 1.2e-223 780.4 597 64.2
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 4.7e-220 768.5 684 61.0
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 6.1e-220 768.1 778 54.0
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 1.8e-219 766.5 497 74.4
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 6.3e-217 758.1 543 67.6
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.1e-216 757.3 583 65.2
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 4.2e-213 745.3 543 66.9
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 6.7e-211 738.0 572 64.3
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 1.7e-209 733.4 570 64.7
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 5.2e-203 711.8 489 69.5
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 2.5e-197 693.0 679 58.6
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 5.7e-194 681.8 541 64.9
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.4e-192 676.4 516 65.1
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 7.0e-192 674.9 588 59.0
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 3.8e-190 669.1 685 56.4
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 7.3e-189 664.8 730 52.6
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.3e-187 659.8 533 63.4
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 5.2e-187 658.7 590 55.8
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 4.9e-185 652.1 510 64.1
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.4e-184 649.8 528 62.9
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 3.0e-182 642.9 582 56.4
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.6e-172 610.5 498 60.8
FvH4_5g01650 Fragaria vesca HOM05D005348 ORTHO05D006635 9.8e-170 601.3 512 61.5
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 1.3e-169 600.9 498 62.4
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 8.3e-169 598.2 422 69.4
Lj8C237T7 Lonicera japonica HOM05D005348 ORTHO05D006635 5.4e-168 595.5 612 53.4
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 6.4e-161 572.0 596 53.0
Ca_06657_v3 Cicer arietinum L. HOM05D005348 ORTHO05D006635 2.6e-154 550.1 546 57.0
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 7.9e-127 458.8 310 73.9
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 6.3e-124 449.1 554 45.1
Zm00001eb103180 Zea mays HOM05D005348 ORTHO05D006635 7.4e-117 425.6 382 55.8
Glyma.09G081420 Glycine max HOM05D005348 ORTHO05D006635 1.7e-116 424.5 289 71.3
AUR62000197 Chenopodium quinoa HOM05D005348 ORTHO05D006635 9.1e-91 339.0 312 57.7
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 1.1e-75 288.9 322 55.9
Prupe.8G039500 Prunus persica HOM05D005348 ORTHO05D006635 2.4e-75 287.7 303 52.1
ATR0757G099 Amborella trichopoda HOM05D005348 ORTHO05D006635 7.0e-75 286.2 209 64.6
Hund02677 Selenicereus undatus HOM05D005348 ORTHO05D006635 3.5e-74 283.9 281 56.2
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 4.0e-70 270.4 175 68.0
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.6e-63 248.4 157 72.0
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.8e-63 247.7 673 31.2
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 1.2e-58 232.3 153 68.6
Peaxi162Scf00714g00422 Petunia axillaris HOM05D005348 ORTHO05D006635 3.5e-50 204.1 241 48.1
MBI04_g31964_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 6.2e-47 193.4 176 59.1
MSTRG.13824 Avicennia marina HOM05D005348 ORTHO05D006635 1.4e-43 182.2 201 49.3
Glyma.09G081380 Glycine max HOM05D005348 ORTHO05D006635 1.9e-40 171.8 121 62.0
FAN08G1421 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.8e-36 157.5 138 66.7
HanXRQChr02g0035411 Helianthus annuus HOM05D005348 ORTHO05D006635 1.2e-34 152.5 123 56.1
Pp3c25_15230 Physcomitrium patens HOM05D005348 ORTHO05D006635 4.6e-34 150.6 305 30.8
CBR_g19301 Chara braunii HOM05D005348 ORTHO05D006635 1.1e-32 146.0 555 24.1
Cre16.g674852 Chlamydomonas reinhardtii HOM05D005348 ORTHO05D006635 2.8e-31 141.4 673 23.5
Mapoly0066s0032 Marchantia polymorpha HOM05D005348 ORTHO05D006635 1.4e-30 139.0 521 23.4
Gohir.D11G021150 Gossypium hirsutum HOM05D005348 ORTHO05D006635 4.0e-30 137.5 144 56.9
FAN08G1570 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.6e-29 134.8 177 48.6
Glyma.11G026250 Glycine max HOM05D005348 ORTHO05D006635 2.6e-29 134.8 109 68.8
Lj8A237G27 Lonicera japonica HOM05D005348 ORTHO05D006635 4.5e-29 134.0 86 83.7
PGSC0003DMG400003049 Solanum tuberosum HOM05D005348 ORTHO05D006635 7.6e-29 133.3 201 44.8
ATR0757G119 Amborella trichopoda HOM05D005348 ORTHO05D006635 6.0e-26 123.6 74 63.5
FAN08G2219 Fragaria x ananassa HOM05D005348 ORTHO05D006635 2.8e-23 114.8 59 81.4
Glyma.01G216933 Glycine max HOM05D005348 ORTHO05D006635 6.2e-23 113.6 99 59.6
Mapoly0035s0066 Marchantia polymorpha HOM05D005348 ORTHO05D006635 4.0e-22 110.9 340 26.2
Glyma.11G176306 Glycine max HOM05D005348 ORTHO05D006635 5.3e-22 110.5 91 59.3
FAN13G0849 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.9e-16 92.0 82 63.4
CsaV3_6G021380 Cucumis sativus L. HOM05D005348 ORTHO05D006635 6.2e-15 87.0 135 40.0
FvH4_5g01630 Fragaria vesca HOM05D005348 ORTHO05D006635 1.3e-12 79.3 41 80.5
HanXRQChr11g0339471 Helianthus annuus HOM05D005348 ORTHO05D227639 6.9e-06 57.0 60 46.7


User provided reference genes

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