Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 1.1e-240 836.3 422 100.0
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 6.7e-150 534.6 378 69.6
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.5e-149 532.7 392 67.3
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 1.3e-148 530.4 392 66.6
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.6e-148 530.0 369 69.4
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.1e-147 527.3 369 69.4
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 1.4e-147 526.9 366 69.7
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 2.4e-147 526.2 369 69.4
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 5.3e-147 525.0 380 67.4
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 6.9e-147 524.6 361 69.3
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 6.9e-147 524.6 366 68.9
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 6.9e-147 524.6 396 63.6
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.5e-146 523.5 370 68.4
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 1.5e-146 523.5 428 61.2
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.6e-146 522.7 438 62.6
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 2.6e-146 522.7 390 65.9
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.4e-146 522.3 389 66.3
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 3.4e-146 522.3 381 65.9
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 4.5e-146 521.9 401 64.1
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 4.5e-146 521.9 413 65.1
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 9.9e-146 520.8 428 61.2
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 1.7e-145 520.0 435 63.4
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.9e-145 518.5 422 63.3
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 4.9e-145 518.5 385 65.5
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 4.9e-145 518.5 422 61.6
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 6.4e-145 518.1 423 61.2
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 1.1e-144 517.3 423 61.2
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 3.2e-144 515.8 396 64.4
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 3.2e-144 515.8 369 69.1
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 5.5e-144 515.0 412 64.8
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 4.6e-143 511.9 430 62.6
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 7.9e-143 511.1 397 63.2
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 3.0e-142 509.2 429 60.8
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 6.7e-142 508.1 365 66.3
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 8.7e-142 507.7 425 60.9
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 1.1e-141 507.3 372 66.9
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 4.3e-141 505.4 432 62.0
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 5.6e-141 505.0 413 61.0
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 5.6e-141 505.0 374 66.3
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 7.4e-141 504.6 418 62.7
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 9.6e-141 504.2 372 65.6
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 4.8e-140 501.9 384 63.5
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 1.4e-139 500.4 413 61.5
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 4.0e-139 498.8 437 58.4
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 4.0e-139 498.8 406 61.8
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 6.9e-139 498.0 366 67.2
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 9.0e-139 497.7 384 63.3
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 1.5e-138 496.9 480 56.9
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 4.5e-138 495.4 346 69.4
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 1.3e-137 493.8 372 64.0
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 1.7e-137 493.4 365 64.9
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 4.9e-137 491.9 367 64.6
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 8.4e-137 491.1 377 63.1
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 3.2e-136 489.2 366 64.8
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 5.5e-136 488.4 418 59.6
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.6e-135 486.9 434 59.2
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 1.6e-135 486.9 418 59.1
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 2.7e-135 486.1 380 61.6
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 7.9e-135 484.6 395 61.3
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 1.8e-134 483.4 380 61.3
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 8.7e-134 481.1 423 58.4
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 8.7e-134 481.1 363 63.4
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 8.7e-134 481.1 404 59.2
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 1.9e-133 479.9 378 63.8
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 2.2e-132 476.5 349 66.8
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 4.1e-131 472.2 352 65.1
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 2.6e-130 469.5 355 63.4
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 5.9e-130 468.4 379 63.1
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 2.2e-129 466.5 390 61.3
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 6.5e-129 464.9 457 56.0
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.4e-128 463.8 393 60.6
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 4.6e-127 458.8 424 58.0
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 5.1e-126 455.3 420 58.3
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 5.1e-126 455.3 363 61.7
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 3.3e-125 452.6 374 60.7
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.7e-124 450.3 347 65.7
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.1e-123 447.6 420 57.1
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 2.7e-119 433.0 502 48.4
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 3.9e-118 429.1 366 57.4
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 1.3e-116 424.1 355 62.0
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 3.1e-115 419.5 380 57.1
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 8.8e-110 401.4 357 62.7
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 3.5e-106 389.4 371 50.9
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 1.2e-103 380.9 331 57.1
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 2.7e-98 363.2 431 47.1
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 7.2e-96 355.1 352 50.9
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 6.1e-95 352.1 377 48.0
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.0e-93 347.1 420 48.3
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 2.2e-92 343.6 418 45.9
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 2.7e-90 336.7 414 47.6
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 2.5e-88 330.1 380 47.6
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 8.3e-84 315.1 236 64.0
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 7.0e-83 312.0 219 67.1
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 1.4e-78 297.7 299 54.2
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 2.8e-71 273.5 337 46.3
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.9e-59 234.2 413 38.0
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 1.9e-56 224.2 356 39.0
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 1.2e-50 204.9 131 69.5
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.8e-47 193.7 122 68.9
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 3.0e-33 147.1 95 68.4
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.8e-31 140.6 167 48.5
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 5.3e-30 136.3 151 49.0
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 4.8e-23 113.2 170 41.2
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 6.2e-23 112.8 168 41.7
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 1.4e-22 111.7 72 69.4
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 3.8e-20 103.6 58 81.0
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 3.9e-17 93.6 79 60.8
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 7.4e-16 89.4 123 44.7
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 4.8e-15 86.7 97 46.4
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 3.1e-14 84.0 59 57.6
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.2e-13 82.0 383 25.3
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 7.7e-13 79.3 218 28.0
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 1.3e-12 78.6 91 42.9
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 3.8e-12 77.0 61 62.3
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 3.8e-12 77.0 52 73.1
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 7.9e-10 69.3 170 29.4


User provided reference genes

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