Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006579 Daucus carota HOM05D006452 ORTHO05D008068 0.0e+00 1119.8 574 100.0
CSS0041533 Camellia sinensis var. sinensis HOM05D006452 ORTHO05D008068 1.1e-147 527.7 630 49.7
Actinidia39488 Actinidia chinensis HOM05D006452 ORTHO05D008068 2.9e-140 503.1 601 48.6
Lj1A1199G43 Lonicera japonica HOM05D006452 ORTHO05D008068 5.5e-139 498.8 621 47.7
RcHm_v2.0_Chr5g0009531 Rosa chinensis HOM05D006452 ORTHO05D008068 1.2e-138 497.7 607 47.9
Hma1.2p1_1465F.1_g285350 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 1.4e-137 494.2 561 50.3
GSVIVG01021140001 Vitis vinifera HOM05D006452 ORTHO05D008068 2.0e-136 490.3 609 47.0
QL05p043485 Quercus lobata HOM05D006452 ORTHO05D008068 4.4e-136 489.2 586 48.0
TAR629G0815 Trochodendron aralioides HOM05D006452 ORTHO05D008068 5.7e-136 488.8 621 45.6
Sabra04G0032100 Salix brachista HOM05D006452 ORTHO05D008068 9.7e-136 488.0 610 45.6
Cfa000544 Carpinus fangiana HOM05D006452 ORTHO05D008068 3.7e-135 486.1 590 47.5
Haze_06337 Corylus avellana HOM05D006452 ORTHO05D008068 4.8e-135 485.7 570 48.8
Ciclev10014636m.g Citrus clementina HOM05D006452 ORTHO05D008068 2.4e-134 483.4 588 47.6
CiPaw.09G065500 Carya illinoinensis HOM05D006452 ORTHO05D008068 5.9e-133 478.8 616 48.1
FvH4_3g08370 Fragaria vesca HOM05D006452 ORTHO05D008068 6.5e-132 475.3 604 47.2
Manes.17G051000 Manihot esculenta HOM05D006452 ORTHO05D008068 2.1e-130 470.3 611 44.8
Gorai.010G157000 Gossypium raimondii HOM05D006452 ORTHO05D008068 3.6e-130 469.5 607 46.1
Prupe.4G054700 Prunus persica HOM05D006452 ORTHO05D008068 1.4e-129 467.6 558 46.6
Nitab4.5_0001375g0100 Nicotiana tabacum HOM05D006452 ORTHO05D008068 3.3e-128 463.0 589 45.5
Gohir.A06G134400 Gossypium hirsutum HOM05D006452 ORTHO05D008068 4.4e-128 462.6 607 45.8
Oeu001094.1 Olea europaea HOM05D006452 ORTHO05D008068 5.7e-128 462.2 584 46.1
Gohir.D06G135100 Gossypium hirsutum HOM05D006452 ORTHO05D008068 9.7e-128 461.5 608 46.1
Duzib235G0445 Durio zibethinus HOM05D006452 ORTHO05D008068 2.8e-127 459.9 615 45.7
Thecc.06G178700 Theobroma cacao HOM05D006452 ORTHO05D008068 2.8e-127 459.9 609 45.2
HanXRQChr16g0518591 Helianthus annuus HOM05D006452 ORTHO05D008068 8.2e-127 458.4 610 44.9
ECA234G2428 Erigeron canadensis HOM05D006452 ORTHO05D008068 1.1e-126 458.0 624 45.0
Lj6g0021964 Lotus japonicus HOM05D006452 ORTHO05D008068 1.4e-126 457.6 612 45.3
Nitab4.5_0000516g0020 Nicotiana tabacum HOM05D006452 ORTHO05D008068 4.1e-126 456.1 608 44.6
Hma1.2p1_1465F.1_g285340 Hydrangea macrophylla HOM05D006452 ORTHO05D008068 5.3e-126 455.7 417 60.0
Nn1g06365 Nelumbo nucifera HOM05D006452 ORTHO05D008068 2.0e-125 453.8 614 44.1
THA.LOC104812622 Tarenaya hassleriana HOM05D006452 ORTHO05D008068 2.7e-125 453.4 592 45.3
CANSAT35G2027 Cannabis sativa HOM05D006452 ORTHO05D008068 5.9e-125 452.2 606 44.9
Atru.chr10.1767 Acer truncatum HOM05D006452 ORTHO05D008068 1.3e-124 451.1 466 53.6
Lsat_1_v5_gn_4_51620 Lactuca sativa HOM05D006452 ORTHO05D008068 6.5e-124 448.7 611 44.4
MD05G1308100 Malus domestica HOM05D006452 ORTHO05D008068 6.5e-124 448.7 612 42.8
COL.COLO4_31396 Corchorus olitorius HOM05D006452 ORTHO05D008068 1.1e-123 448.0 592 47.5
Medtr2g014890 Medicago truncatula HOM05D006452 ORTHO05D008068 1.1e-123 448.0 597 44.9
Ca_00397_v3 Cicer arietinum L. HOM05D006452 ORTHO05D008068 1.6e-122 444.1 613 42.9
TWI38G0383 Tripterygium wilfordii HOM05D006452 ORTHO05D008068 1.8e-121 440.7 615 44.6
Thhalv10007091m.g Eutrema salsugineum HOM05D006452 ORTHO05D008068 5.7e-120 435.6 606 43.4
AT1G28530 Arabidopsis thaliana HOM05D006452 ORTHO05D008068 1.3e-119 434.5 600 43.8
AL1G42150 Arabidopsis lyrata HOM05D006452 ORTHO05D008068 1.7e-119 434.1 603 43.3
AUR62014896 Chenopodium quinoa HOM05D006452 ORTHO05D008068 4.8e-119 432.6 560 45.5
Rhsim02G0137400 Rhododendron simsii HOM05D006452 ORTHO05D008068 4.8e-119 432.6 643 42.8
Migut.M01092 Erythranthe guttata HOM05D006452 ORTHO05D008068 8.3e-119 431.8 580 45.2
Sopen03g002290 Solanum pennellii HOM05D006452 ORTHO05D008068 1.8e-118 430.6 557 44.3
PGSC0003DMG400012819 Solanum tuberosum HOM05D006452 ORTHO05D008068 9.1e-118 428.3 557 45.2
MELO3C007247.2 Cucumis melo HOM05D006452 ORTHO05D008068 1.2e-117 427.9 617 43.3
Glyma.13G152304 Glycine max HOM05D006452 ORTHO05D008068 1.2e-117 427.9 580 42.6
BcaC01g00067 Brassica carinata HOM05D006452 ORTHO05D008068 1.6e-117 427.6 604 42.7
Carub.0001s2699 Capsella rubella HOM05D006452 ORTHO05D008068 2.0e-117 427.2 607 43.0
Sp1g24780 Schrenkiella parvula HOM05D006452 ORTHO05D008068 3.5e-117 426.4 600 42.7
C03p75340 Brassica napus HOM05D006452 ORTHO05D008068 4.5e-117 426.0 605 42.5
AUR62031101 Chenopodium quinoa HOM05D006452 ORTHO05D008068 7.7e-117 425.2 560 45.0
BolC3t19793H Brassica oleracea HOM05D006452 ORTHO05D008068 1.0e-116 424.9 605 42.1
A08p25460 Brassica napus HOM05D006452 ORTHO05D008068 1.3e-116 424.5 605 42.3
ClCG01G023380 Citrullus lanatus HOM05D006452 ORTHO05D008068 2.9e-116 423.3 660 41.8
BraA08t34497Z Brassica rapa HOM05D006452 ORTHO05D008068 6.5e-116 422.2 605 42.1
BcaB03g12098 Brassica carinata HOM05D006452 ORTHO05D008068 1.5e-115 421.0 602 41.9
Glyma.10G069100 Glycine max HOM05D006452 ORTHO05D008068 1.9e-115 420.6 591 42.3
Aqoxy4G00567 Aquilegia oxysepala HOM05D006452 ORTHO05D008068 3.2e-115 419.9 632 42.6
CARHR028010 Cardamine hirsuta HOM05D006452 ORTHO05D008068 1.2e-114 417.9 601 42.8
Cpa.g.sc7.8 Carica papaya HOM05D006452 ORTHO05D008068 1.2e-114 417.9 440 53.4
Phvul.006G180500 Phaseolus vulgaris HOM05D006452 ORTHO05D008068 1.6e-114 417.5 581 42.2
Cc00_g07720 Coffea canephora HOM05D006452 ORTHO05D008068 2.8e-114 416.8 608 41.8
vmacro15945 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 2.8e-114 416.8 396 56.8
EL10Ac8g20457 Beta vulgaris HOM05D006452 ORTHO05D008068 5.2e-113 412.5 634 41.5
FAN11G3013 Fragaria x ananassa HOM05D006452 ORTHO05D008068 6.8e-113 412.1 593 43.5
FAN21G3590 Fragaria x ananassa HOM05D006452 ORTHO05D008068 5.7e-112 409.1 614 43.0
arahy.Tifrunner.gnm1.ann1.FLUH97 Arachis hypogaea HOM05D006452 ORTHO05D008068 7.5e-112 408.7 611 41.1
arahy.Tifrunner.gnm1.ann1.228Z0R Arachis hypogaea HOM05D006452 ORTHO05D008068 9.8e-112 408.3 611 40.9
FAN25G3335 Fragaria x ananassa HOM05D006452 ORTHO05D008068 1.7e-111 407.5 570 45.3
SalBow8G3895 Salvia bowleyana HOM05D006452 ORTHO05D008068 1.7e-111 407.5 618 41.9
VMungo0540G0818 Vigna mungo HOM05D006452 ORTHO05D008068 3.7e-111 406.4 591 42.1
Lalb_Chr18g0059351 Lupinus albus HOM05D006452 ORTHO05D008068 2.4e-110 403.7 599 41.4
MBI07_g32549_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 2.4e-110 403.7 434 49.8
Eucgr.D00580 Eucalyptus grandis HOM05D006452 ORTHO05D008068 7.8e-109 398.7 439 51.9
CAN.G189.65 Capsicum annuum HOM05D006452 ORTHO05D008068 1.3e-108 397.9 481 48.2
TPR.G11703 Trifolium pratense HOM05D006452 ORTHO05D008068 3.8e-108 396.4 412 51.2
unitig_8.g4630 Utricularia gibba HOM05D006452 ORTHO05D008068 5.6e-107 392.5 530 44.7
Aa31LG6G11040 Aethionema arabicum HOM05D006452 ORTHO05D008068 1.6e-106 391.0 694 37.5
PGR004G2109 Punica granatum HOM05D006452 ORTHO05D008068 6.1e-106 389.0 436 49.8
SGA_v2.0_scaffold16G07655 Striga asiatica HOM05D006452 ORTHO05D008068 1.8e-105 387.5 624 40.4
PSO832G2664 Papaver somniferum HOM05D006452 ORTHO05D008068 2.3e-105 387.1 650 36.6
PSO210G4080 Papaver somniferum HOM05D006452 ORTHO05D008068 6.4e-103 379.0 421 48.0
Dinv40619 Davidia involucrata HOM05D006452 ORTHO05D008068 8.3e-103 378.6 442 48.0
Psat1g201640 Pisum sativum HOM05D006452 ORTHO05D008068 8.6e-100 368.6 416 50.2
Hund23835 Selenicereus undatus HOM05D006452 ORTHO05D008068 1.6e-98 364.4 462 47.4
ATR0602G160 Amborella trichopoda HOM05D006452 ORTHO05D008068 8.6e-92 342.0 583 37.6
Sc17g0005860 Simmondsia chinensis HOM05D006452 ORTHO05D008068 1.2e-90 338.2 583 41.0
Solyc03g006280.4 Solanum lycopersicum HOM05D006452 ORTHO05D008068 1.8e-89 334.3 557 38.2
HPP92_000497 Vanilla planifolia HOM05D006452 ORTHO05D008068 1.6e-85 321.2 571 37.0
Sed0012413 Sechium edule HOM05D006452 ORTHO05D008068 5.6e-83 312.8 450 41.3
CDE10G0189 Ceratophyllum demersum HOM05D006452 ORTHO05D008068 2.1e-82 310.8 488 38.9
Potri.004G051000 Populus trichocarpa HOM05D006452 ORTHO05D008068 8.1e-82 308.9 409 42.1
FAN16G3312 Fragaria x ananassa HOM05D006452 ORTHO05D008068 2.7e-77 293.9 407 42.0
Peaxi162Scf01018g00215 Petunia axillaris HOM05D006452 ORTHO05D008068 5.4e-70 269.6 611 33.2
CAN.G1286.36 Capsicum annuum HOM05D006452 ORTHO05D008068 3.6e-66 256.9 293 48.1
MBI07_g06446_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 9.9e-64 248.8 615 31.2
CsaV3_6G050510 Cucumis sativus L. HOM05D006452 ORTHO05D008068 3.8e-63 246.9 408 37.5
Os02g0109900 Oryza sativa ssp. japonica HOM05D006452 ORTHO05D008068 1.5e-59 235.0 564 32.1
Zm00001eb229620 Zea mays HOM05D006452 ORTHO05D008068 1.3e-52 211.8 631 29.2
CAN.G801.36 Capsicum annuum HOM05D006452 ORTHO05D008068 1.8e-52 211.5 234 49.6
Mapoly0052s0014 Marchantia polymorpha HOM05D006452 ORTHO05D008068 4.3e-35 153.7 392 29.1
AagrBONN_evm.TU.Sc2ySwM_228.5590 Anthoceros agrestis HOM05D006452 ORTHO05D008068 7.9e-29 132.9 387 27.9
SEGI_13408 Sequoiadendron giganteum HOM05D006452 ORTHO05D008068 5.7e-27 126.7 209 36.4
CDE10G0511 Ceratophyllum demersum HOM05D002520 ORTHO05D003144 3.3e-19 100.9 124 50.8
Pp3c17_22050 Physcomitrium patens HOM05D006452 ORTHO05D008068 9.7e-19 99.4 326 27.3
BcaC01g06820 Brassica carinata HOM05D006452 ORTHO05D008068 2.5e-14 84.7 101 51.5
GSVIVG01026713001 Vitis vinifera HOM05D006452 ORTHO05D008068 9.4e-14 82.8 103 43.7
MBI15_g20021_MAGBIO Magnolia biondii HOM05D006452 ORTHO05D008068 1.6e-13 82.0 78 56.4
vmacro15946 Vaccinium macrocarpon HOM05D006452 ORTHO05D008068 3.0e-12 77.8 79 45.6
Peaxi162Scf01018g00213 Petunia axillaris HOM05D006452 ORTHO05D008068 8.8e-12 76.3 67 59.7
unitig_8.g4641 Utricularia gibba HOM05D006452 ORTHO05D008068 4.8e-10 70.5 65 47.7
TPR.G10795 Trifolium pratense HOM05D006452 ORTHO05D008068 1.1e-09 69.3 70 45.7
Lsat_1_v5_gn_9_9480 Lactuca sativa HOM05D006452 ORTHO05D008068 3.1e-09 67.8 71 46.5
Psat1g201600 Pisum sativum HOM05D006452 ORTHO05D008068 9.1e-09 66.2 70 44.3


User provided reference genes

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