Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006547 Daucus carota HOM05D004525 ORTHO05D005295 6.8e-100 367.5 203 100.0
DCAR_011870 Daucus carota HOM05D004525 ORTHO05D005295 4.7e-85 318.2 183 93.4
Thecc.03G220900 Theobroma cacao HOM05D004525 ORTHO05D005295 3.4e-67 258.8 164 81.1
Duzib205G1187 Durio zibethinus HOM05D004525 ORTHO05D005295 5.8e-67 258.1 164 79.9
COL.COLO4_10799 Corchorus olitorius HOM05D004525 ORTHO05D005295 7.6e-67 257.7 182 75.3
Dinv38179 Davidia involucrata HOM05D004525 ORTHO05D005295 1.3e-66 256.9 166 79.5
Gorai.008G258800 Gossypium raimondii HOM05D004525 ORTHO05D005295 2.2e-66 256.1 165 80.0
GSVIVG01019654001 Vitis vinifera HOM05D004525 ORTHO05D005295 4.9e-66 255.0 162 80.2
Ciclev10022441m.g Citrus clementina HOM05D004525 ORTHO05D005295 6.4e-66 254.6 162 80.2
Duzib068G1021 Durio zibethinus HOM05D004525 ORTHO05D005295 6.4e-66 254.6 164 79.3
Gohir.A12G240200 Gossypium hirsutum HOM05D004525 ORTHO05D005295 6.4e-66 254.6 164 79.3
Gohir.D12G241500 Gossypium hirsutum HOM05D004525 ORTHO05D005295 6.4e-66 254.6 165 79.4
Lsat_1_v5_gn_3_14420 Lactuca sativa HOM05D004525 ORTHO05D005295 8.4e-66 254.2 165 78.2
QL02p027997 Quercus lobata HOM05D004525 ORTHO05D005295 8.4e-66 254.2 180 75.0
Manes.09G101000 Manihot esculenta HOM05D004525 ORTHO05D005295 1.1e-65 253.8 164 79.3
Potri.001G083801 Populus trichocarpa HOM05D004525 ORTHO05D005295 1.1e-65 253.8 164 79.9
QL12p036922 Quercus lobata HOM05D004525 ORTHO05D005295 1.4e-65 253.4 180 75.0
Cc08_g16770 Coffea canephora HOM05D004525 ORTHO05D005295 1.9e-65 253.1 162 79.6
Actinidia22207 Actinidia chinensis HOM05D004525 ORTHO05D005295 4.1e-65 251.9 186 71.0
Hma1.2p1_0456F.1_g156630 Hydrangea macrophylla HOM05D004525 ORTHO05D005295 7.1e-65 251.1 155 83.2
CSS0029651 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 9.2e-65 250.8 183 72.7
HanXRQChr17g0534221 Helianthus annuus HOM05D004525 ORTHO05D005295 1.2e-64 250.4 167 77.2
SalBow6G4763 Salvia bowleyana HOM05D004525 ORTHO05D005295 1.2e-64 250.4 163 77.9
CiPaw.11G112000 Carya illinoinensis HOM05D004525 ORTHO05D005295 1.6e-64 250.0 164 77.4
THA.LOC104809303 Tarenaya hassleriana HOM05D004525 ORTHO05D005295 1.6e-64 250.0 166 76.5
Haze_04010 Corylus avellana HOM05D004525 ORTHO05D005295 2.1e-64 249.6 160 79.4
Sabra01G0060700 Salix brachista HOM05D004525 ORTHO05D005295 2.1e-64 249.6 177 73.4
Prupe.2G307200 Prunus persica HOM05D004525 ORTHO05D005295 2.7e-64 249.2 164 79.3
TWI56G0194 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 2.7e-64 249.2 189 70.4
Cfa006748 Carpinus fangiana HOM05D004525 ORTHO05D005295 3.5e-64 248.8 160 79.4
CSS0049671 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 4.6e-64 248.4 183 72.1
ClCG10G000810 Citrullus lanatus HOM05D004525 ORTHO05D005295 4.6e-64 248.4 169 76.3
Migut.E00628 Erythranthe guttata HOM05D004525 ORTHO05D005295 4.6e-64 248.4 163 77.3
MD06G1119500 Malus domestica HOM05D004525 ORTHO05D005295 4.6e-64 248.4 164 78.0
BraA07t29074Z Brassica rapa HOM05D001252 ORTHO05D005295 6.0e-64 248.1 181 70.7
Cfa011920 Carpinus fangiana HOM05D004525 ORTHO05D005295 6.0e-64 248.1 164 78.0
CSS0036474 Camellia sinensis var. sinensis HOM05D004525 ORTHO05D005295 7.8e-64 247.7 183 72.1
Cpa.g.sc27.182 Carica papaya HOM05D004525 ORTHO05D005295 7.8e-64 247.7 162 77.2
SGA_v2.0_scaffold14G07039 Striga asiatica HOM05D004525 ORTHO05D005295 7.8e-64 247.7 163 76.7
SGA_v2.0_scaffold36G14274 Striga asiatica HOM05D004525 ORTHO05D005295 7.8e-64 247.7 163 76.7
Atru.chr9.1879 Acer truncatum HOM05D004525 ORTHO05D005295 1.0e-63 247.3 164 76.2
Nitab4.5_0001367g0040 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.0e-63 247.3 173 74.6
CsaV3_3G000870 Cucumis sativus L. HOM05D004525 ORTHO05D005295 1.7e-63 246.5 164 78.7
ECA246G3328 Erigeron canadensis HOM05D004525 ORTHO05D005295 1.7e-63 246.5 155 80.0
A07p13030 Brassica napus HOM05D001252 ORTHO05D005295 6.6e-63 244.6 165 75.2
Prupe.5G130000 Prunus persica HOM05D004525 ORTHO05D005295 6.6e-63 244.6 184 71.2
Nitab4.5_0012632g0010 Nicotiana tabacum HOM05D004525 ORTHO05D005295 1.1e-62 243.8 173 74.0
EL10Ac5g12425 Beta vulgaris HOM05D004525 ORTHO05D005295 1.9e-62 243.0 159 78.6
AT1G26665 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 2.5e-62 242.7 163 73.6
PGSC0003DMG400029951 Solanum tuberosum HOM05D004525 ORTHO05D005295 2.5e-62 242.7 157 78.3
TWI36G0523 Tripterygium wilfordii HOM05D004525 ORTHO05D005295 2.5e-62 242.7 157 79.0
TAR629G2664 Trochodendron aralioides HOM05D004525 ORTHO05D005295 2.5e-62 242.7 161 77.6
BcaC06g35131 Brassica carinata HOM05D004525 ORTHO05D005295 3.3e-62 242.3 165 74.5
Thhalv10008848m.g Eutrema salsugineum HOM05D004525 ORTHO05D005295 3.3e-62 242.3 163 74.2
Nn3g18812 Nelumbo nucifera HOM05D004525 ORTHO05D005295 3.3e-62 242.3 183 71.0
FvH4_4g11450 Fragaria vesca HOM05D004525 ORTHO05D005295 4.3e-62 241.9 185 69.2
Sabra03G0106900 Salix brachista HOM05D004525 ORTHO05D005295 4.3e-62 241.9 164 77.4
Solyc08g065160.3 Solanum lycopersicum HOM05D004525 ORTHO05D005295 4.3e-62 241.9 163 75.5
Sopen08g018760 Solanum pennellii HOM05D004525 ORTHO05D005295 4.3e-62 241.9 163 75.5
AL1G39060 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 5.6e-62 241.5 165 73.3
BcaB03g14082 Brassica carinata HOM05D004525 ORTHO05D005295 5.6e-62 241.5 165 74.5
Eucgr.C04229 Eucalyptus grandis HOM05D004525 ORTHO05D005295 5.6e-62 241.5 183 69.4
MD14G1136300 Malus domestica HOM05D004525 ORTHO05D005295 5.6e-62 241.5 184 71.2
Potri.003G146900 Populus trichocarpa HOM05D004525 ORTHO05D005295 7.3e-62 241.1 161 77.6
RcHm_v2.0_Chr1g0332661 Rosa chinensis HOM05D004525 ORTHO05D005295 7.3e-62 241.1 185 70.3
unitig_744.g24303 Utricularia gibba HOM05D004525 ORTHO05D005295 7.3e-62 241.1 170 73.5
C07p19480 Brassica napus HOM05D001252 ORTHO05D005295 9.6e-62 240.7 165 73.9
FAN07G0034 Fragaria x ananassa HOM05D004525 ORTHO05D005295 9.6e-62 240.7 185 69.2
Sed0024458 Sechium edule HOM05D004525 ORTHO05D005295 9.6e-62 240.7 181 70.2
CiPaw.12G077100 Carya illinoinensis HOM05D004525 ORTHO05D005295 1.2e-61 240.4 177 71.2
MSTRG.12201 Avicennia marina HOM05D004525 ORTHO05D005295 1.6e-61 240.0 163 74.8
MSTRG.24865 Avicennia marina HOM05D004525 ORTHO05D005295 1.6e-61 240.0 170 72.9
RcHm_v2.0_Chr6g0273561 Rosa chinensis HOM05D004525 ORTHO05D005295 2.1e-61 239.6 185 69.7
PGR031G2275 Punica granatum HOM05D004525 ORTHO05D005295 4.7e-61 238.4 180 70.6
Sp1g22150 Schrenkiella parvula HOM05D004525 ORTHO05D005295 6.2e-61 238.0 181 67.4
Aa31LG9G260 Aethionema arabicum HOM05D004525 ORTHO05D005295 8.1e-61 237.7 159 76.1
vmacro11499 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 8.1e-61 237.7 168 74.4
Ca_02991_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 1.1e-60 237.3 176 69.9
CARHR212640 Cardamine hirsuta HOM05D004525 ORTHO05D005295 1.8e-60 236.5 159 74.2
MBI04_g25309_MAGBIO Magnolia biondii HOM05D004525 ORTHO05D005295 2.4e-60 236.1 163 73.0
Ca_17957_v3 Cicer arietinum L. HOM05D004525 ORTHO05D005295 3.1e-60 235.7 176 69.3
FAN22G0758 Fragaria x ananassa HOM05D004525 ORTHO05D005295 1.2e-59 233.8 186 68.3
Hund11348 Selenicereus undatus HOM05D004525 ORTHO05D005295 1.2e-59 233.8 159 74.8
Aqoxy3G00526 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 3.4e-59 232.3 162 74.1
Aqoxy5G04330 Aquilegia oxysepala HOM05D004525 ORTHO05D005295 3.4e-59 232.3 162 74.1
Lj8A200T57 Lonicera japonica HOM05D004525 ORTHO05D005295 3.4e-59 232.3 151 79.5
PSO017G1681 Papaver somniferum HOM05D004525 ORTHO05D005295 4.4e-59 231.9 156 74.4
AUR62007057 Chenopodium quinoa HOM05D004525 ORTHO05D005295 5.8e-59 231.5 159 73.0
PSO478G2085 Papaver somniferum HOM05D004525 ORTHO05D005295 7.6e-59 231.1 156 74.4
Ah.12g053230 Amaranthus hybridus HOM05D004525 ORTHO05D005295 1.3e-58 230.3 159 72.3
Glyma.08G296500 Glycine max HOM05D004525 ORTHO05D005295 1.3e-58 230.3 177 68.4
VMungo0251G0643 Vigna mungo HOM05D004525 ORTHO05D005295 2.2e-58 229.6 190 65.3
Lalb_Chr13g0294931 Lupinus albus HOM05D004525 ORTHO05D005295 3.8e-58 228.8 163 71.8
Phvul.003G069600 Phaseolus vulgaris HOM05D004525 ORTHO05D005295 3.8e-58 228.8 177 68.4
Glyma.18G125700 Glycine max HOM05D004525 ORTHO05D005295 8.4e-58 227.6 161 73.9
AT5G41910 Arabidopsis thaliana HOM05D004525 ORTHO05D005295 1.1e-57 227.3 166 72.3
CARHR025300 Cardamine hirsuta HOM05D004525 ORTHO05D005295 1.1e-57 227.3 164 70.7
Zm00001eb103320 Zea mays HOM05D004525 ORTHO05D005295 1.9e-57 226.5 153 77.1
TPR.G15828 Trifolium pratense HOM05D004525 ORTHO05D005295 2.4e-57 226.1 182 67.0
Sc01g0010720 Simmondsia chinensis HOM05D004525 ORTHO05D005295 5.4e-57 224.9 165 70.3
HPP92_025871 Vanilla planifolia HOM05D004525 ORTHO05D005295 5.4e-57 224.9 178 65.7
AL7G47302 Arabidopsis lyrata HOM05D004525 ORTHO05D005295 9.3e-57 224.2 165 72.1
Lalb_Chr12g0205381 Lupinus albus HOM05D004525 ORTHO05D005295 1.2e-56 223.8 179 64.8
Rhsim07G0078000 Rhododendron simsii HOM05D004525 ORTHO05D005295 2.1e-56 223.0 182 65.4
ATR0620G086 Amborella trichopoda HOM05D004525 ORTHO05D005295 2.7e-56 222.6 170 67.6
Carub.0001s2436 Capsella rubella HOM05D004525 ORTHO05D005295 2.7e-56 222.6 163 69.3
Medtr8g085570 Medicago truncatula HOM05D004525 ORTHO05D005295 7.8e-56 221.1 177 65.5
Zm00001eb319380 Zea mays HOM05D004525 ORTHO05D005295 2.3e-55 219.5 153 75.8
Haze_09177 Corylus avellana HOM05D004525 ORTHO05D005295 3.9e-55 218.8 146 76.0
vmacro13851 Vaccinium macrocarpon HOM05D004525 ORTHO05D005295 3.9e-55 218.8 165 68.5
Psat7g073160 Pisum sativum HOM05D004525 ORTHO05D005295 1.1e-54 217.2 182 64.3
CANSAT56G2042 Cannabis sativa HOM05D004525 ORTHO05D005295 3.3e-54 215.7 175 65.7
unitig_21.g20890 Utricularia gibba HOM05D004525 ORTHO05D005295 7.3e-54 214.5 171 67.3
Os09g0528300 Oryza sativa ssp. japonica HOM05D004525 ORTHO05D005295 2.1e-53 213.0 153 72.5
Lj4g0018067 Lotus japonicus HOM05D004525 ORTHO05D005295 2.8e-53 212.6 165 66.7
BolC7t42467H Brassica oleracea HOM05D001252 ORTHO05D001661 1.4e-52 210.3 143 73.4
Atru.chr3.1913 Acer truncatum HOM05D004525 ORTHO05D005295 3.1e-52 209.1 137 75.9
TPR.G11962 Trifolium pratense HOM05D004525 ORTHO05D005295 5.3e-52 208.4 182 62.6
BraA09t39504Z Brassica rapa HOM05D004525 ORTHO05D005295 1.5e-51 206.8 162 67.3
Peaxi162Scf01444g00013 Petunia axillaris HOM05D004525 ORTHO05D005295 2.0e-51 206.5 168 67.9
CDE07G1557 Ceratophyllum demersum HOM05D004525 ORTHO05D005295 2.6e-51 206.1 163 65.0
Oeu022035.1 Olea europaea HOM05D004525 ORTHO05D005295 4.9e-50 201.8 229 54.1
Psat7g073280 Pisum sativum HOM05D004525 ORTHO05D005295 4.9e-50 201.8 160 66.9
Lj4g0019040 Lotus japonicus HOM05D004525 ORTHO05D005295 1.5e-46 190.3 142 68.3
FAN17G2704 Fragaria x ananassa HOM05D004525 ORTHO05D005295 2.5e-46 189.5 187 59.9
C05p24330 Brassica napus HOM05D004525 ORTHO05D005295 4.8e-45 185.3 147 68.7
Psat7g072880 Pisum sativum HOM05D004525 ORTHO05D005295 1.8e-44 183.3 155 63.2
FAN08G2166 Fragaria x ananassa HOM05D000319 ORTHO05D035382 6.9e-44 181.4 128 69.5
Psat7g074000 Pisum sativum HOM05D004525 ORTHO05D005295 9.9e-43 177.6 169 58.6
arahy.Tifrunner.gnm1.ann1.0LH6ZS Arachis hypogaea HOM05D004525 ORTHO05D005295 9.3e-41 171.0 161 59.0
MELO3C013773.2 Cucumis melo HOM05D004525 ORTHO05D005295 2.1e-40 169.9 207 51.2
arahy.Tifrunner.gnm1.ann1.DJD4V2 Arachis hypogaea HOM05D004525 ORTHO05D005295 2.7e-40 169.5 161 58.4
Nitab4.5_0017193g0030 Nicotiana tabacum HOM05D004525 ORTHO05D005295 3.5e-40 169.1 173 56.6
Peaxi162Scf00640g00032 Petunia axillaris HOM05D004525 ORTHO05D005295 2.3e-39 166.4 132 65.9
AUR62019920 Chenopodium quinoa HOM05D004525 ORTHO05D005295 3.0e-39 166.0 109 73.4
TAR375G0036 Trochodendron aralioides HOM05D004525 ORTHO05D005295 5.6e-38 161.8 105 74.3
Cfa007058 Carpinus fangiana HOM05D004525 ORTHO05D005295 2.1e-37 159.8 110 74.5
FvH4_5g19692 Fragaria vesca HOM05D004525 ORTHO05D005295 3.7e-37 159.1 111 71.2
Mapoly0151s0039 Marchantia polymorpha HOM05D004525 ORTHO05D005295 3.7e-37 159.1 167 49.7
PGSC0003DMG400040735 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.2e-35 154.1 127 66.1
Pp3c11_16910 Physcomitrium patens HOM05D004525 ORTHO05D005295 1.5e-35 153.7 158 50.0
Actinidia27285 Actinidia chinensis HOM05D004525 ORTHO05D005295 3.8e-34 149.1 183 49.2
PGSC0003DMG400043501 Solanum tuberosum HOM05D004525 ORTHO05D005295 6.5e-34 148.3 127 63.8
PGSC0003DMG400008601 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.1e-33 147.5 127 63.8
PGSC0003DMG400039131 Solanum tuberosum HOM05D004525 ORTHO05D005295 1.9e-33 146.7 126 61.9
SMO301G0053 Selaginella moellendorffii HOM05D004525 ORTHO05D005295 2.5e-33 146.4 145 53.1
PGSC0003DMG400017120 Solanum tuberosum HOM05D004525 ORTHO05D005295 7.1e-33 144.8 128 64.1
CAN.G6.3 Capsicum annuum HOM05D004525 ORTHO05D005295 3.0e-31 139.4 82 80.5
BcaC05g26400 Brassica carinata HOM05D004525 ORTHO05D005295 1.1e-30 137.5 91 70.3
AagrBONN_evm.TU.Sc2ySwM_117.1849 Anthoceros agrestis HOM05D004525 ORTHO05D005295 3.3e-30 136.0 180 42.8
AagrBONN_evm.TU.Sc2ySwM_368.381 Anthoceros agrestis HOM05D004525 ORTHO05D005295 9.6e-30 134.4 176 42.6
SEGI_32557 Sequoiadendron giganteum HOM05D004525 ORTHO05D005295 3.7e-29 132.5 103 60.2
A09p40080 Brassica napus HOM05D004525 ORTHO05D005295 8.2e-29 131.3 118 59.3
Nitab4.5_0002724g0080 Nicotiana tabacum HOM05D004525 ORTHO05D005295 4.6e-24 115.5 99 64.6
RcHm_v2.0_Chr7g0187021 Rosa chinensis HOM05D004525 ORTHO05D005295 1.4e-17 94.0 184 40.2
CAN.G1631.10 Capsicum annuum HOM05D004525 ORTHO05D005295 2.5e-17 93.2 86 61.6
RcHm_v2.0_Chr5g0055281 Rosa chinensis HOM05D004525 ORTHO05D005295 1.1e-12 77.8 58 62.1
BcaB05g21931 Brassica carinata HOM05D004525 ORTHO05D005295 5.0e-10 68.9 52 71.2
SGA_v2.0_scaffold104G30259 Striga asiatica HOM05D004525 ORTHO05D005295 2.7e-08 63.2 130 37.7
TAR374G0495 Trochodendron aralioides HOM05D004525 ORTHO05D005295 2.7e-08 63.2 114 41.2
Cre12.g556450 Chlamydomonas reinhardtii HOM05D004525 ORTHO05D005295 7.4e-06 55.1 150 28.0


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