Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006511 Daucus carota HOM05D005777 ORTHO05D006854 0.0e+00 1149.8 582 100.0
Lj8C204T6 Lonicera japonica HOM05D005777 ORTHO05D006854 6.3e-82 309.3 686 35.3
Cfa011969 Carpinus fangiana HOM05D005777 ORTHO05D006854 5.9e-80 302.8 545 39.3
Haze_09107 Corylus avellana HOM05D005777 ORTHO05D006854 7.7e-80 302.4 565 38.1
QL02p029612 Quercus lobata HOM05D005777 ORTHO05D006854 3.8e-79 300.1 532 38.9
Nitab4.5_0002793g0030 Nicotiana tabacum HOM05D005777 ORTHO05D006854 7.9e-77 292.4 460 40.4
Prupe.5G124500 Prunus persica HOM05D005777 ORTHO05D006854 1.8e-76 291.2 395 43.5
Nitab4.5_0002367g0090 Nicotiana tabacum HOM05D005777 ORTHO05D006854 4.4e-75 286.6 510 38.6
FvH4_5g11630 Fragaria vesca HOM05D005777 ORTHO05D006854 1.7e-66 258.1 407 41.3
TAR629G1222 Trochodendron aralioides HOM05D005777 ORTHO05D006854 6.3e-66 256.1 528 34.7
RcHm_v2.0_Chr7g0186161 Rosa chinensis HOM05D005777 ORTHO05D006854 1.2e-64 251.9 300 46.3
vmacro13879 Vaccinium macrocarpon HOM05D005777 ORTHO05D006854 1.2e-64 251.9 443 39.1
ECA240G0322 Erigeron canadensis HOM05D005777 ORTHO05D006854 1.6e-64 251.5 637 33.3
CSS0003604 Camellia sinensis var. sinensis HOM05D005777 ORTHO05D006854 2.9e-63 247.3 370 40.5
Solyc08g082720.4 Solanum lycopersicum HOM05D005777 ORTHO05D006854 5.5e-62 243.0 505 34.9
Sopen08g030950 Solanum pennellii HOM05D005777 ORTHO05D006854 1.6e-61 241.5 503 34.6
Actinidia22740 Actinidia chinensis HOM05D005777 ORTHO05D006854 3.0e-60 237.3 584 33.0
PGSC0003DMG400012134 Solanum tuberosum HOM05D005777 ORTHO05D006854 2.6e-59 234.2 492 34.6
CAN.G567.32 Capsicum annuum HOM05D005777 ORTHO05D006854 3.3e-59 233.8 485 34.0
Sed0007946 Sechium edule HOM05D005777 ORTHO05D006854 4.4e-59 233.4 425 36.7
Rhsim07G0080700 Rhododendron simsii HOM05D005777 ORTHO05D006854 9.7e-59 232.3 343 41.4
Aqoxy5G04312 Aquilegia oxysepala HOM05D005777 ORTHO05D006854 3.7e-58 230.3 382 40.3
MBI07_g24771_MAGBIO Magnolia biondii HOM05D005777 ORTHO05D006854 4.8e-58 229.9 515 33.2
FAN18G2480 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.4e-57 228.4 337 43.0
HanXRQChr03g0083721 Helianthus annuus HOM05D005777 ORTHO05D006854 1.8e-57 228.0 362 42.3
Sabra07G0049700 Salix brachista HOM05D005777 ORTHO05D006854 3.1e-57 227.3 397 38.5
Peaxi162Scf00074g00526 Petunia axillaris HOM05D005777 ORTHO05D006854 4.1e-57 226.9 439 36.2
Lsat_1_v5_gn_6_83361 Lactuca sativa HOM05D005777 ORTHO05D006854 2.9e-55 220.7 439 35.5
CsaV3_5G001940 Cucumis sativus L. HOM05D005777 ORTHO05D006854 3.8e-55 220.3 554 32.1
MD06G1111700 Malus domestica HOM05D005777 ORTHO05D006854 3.8e-55 220.3 422 35.8
MELO3C033830.2 Cucumis melo HOM05D005777 ORTHO05D006854 6.5e-55 219.5 434 35.3
Nn1g00296 Nelumbo nucifera HOM05D005777 ORTHO05D006854 9.4e-54 215.7 546 32.8
FAN13G2465 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.2e-53 215.3 504 32.7
FAN08G0729 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.4e-52 211.8 306 44.4
PGR042G2859 Punica granatum HOM05D005777 ORTHO05D006854 9.8e-51 205.7 418 37.8
CANSAT21G0853 Cannabis sativa HOM05D005777 ORTHO05D006854 1.7e-50 204.9 440 32.0
FAN04G0792 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.2e-50 204.5 397 37.3
Potri.007G058050 Populus trichocarpa HOM05D005777 ORTHO05D006854 1.1e-49 202.2 637 29.8
Phvul.002G300700 Phaseolus vulgaris HOM05D005777 ORTHO05D006854 2.7e-48 197.6 436 33.9
Medtr8g099725 Medicago truncatula HOM05D005777 ORTHO05D006854 3.5e-48 197.2 415 35.9
Atru.chr9.1942 Acer truncatum HOM05D005777 ORTHO05D006854 2.3e-47 194.5 214 47.2
Lj4g0026879 Lotus japonicus HOM05D005777 ORTHO05D006854 2.3e-47 194.5 445 32.6
Psat7g024000 Pisum sativum HOM05D005777 ORTHO05D006854 8.6e-47 192.6 425 33.2
Glyma.05G218900 Glycine max HOM05D005777 ORTHO05D006854 1.6e-45 188.3 431 32.3
TWI60G0567 Tripterygium wilfordii HOM05D005777 ORTHO05D006854 6.1e-45 186.4 231 47.2
Thecc.08G166000 Theobroma cacao HOM05D005777 ORTHO05D006854 3.4e-43 180.6 371 34.0
FAN18G2579 Fragaria x ananassa HOM05D005777 ORTHO05D006854 2.8e-42 177.6 298 38.6
Eucgr.E00744 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.9e-42 176.8 679 27.4
PSO170G4328 Papaver somniferum HOM05D005777 ORTHO05D006854 7.0e-41 172.9 393 33.3
Lalb_Chr05g0223951 Lupinus albus HOM05D005777 ORTHO05D006854 1.3e-39 168.7 241 41.9
Glyma.08G025000 Glycine max HOM05D005777 ORTHO05D006854 6.6e-39 166.4 188 48.4
Eucgr.E00747 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.5e-38 164.5 213 44.1
TPR.G3378 Trifolium pratense HOM05D005777 ORTHO05D006854 7.3e-38 162.9 235 42.1
Cpa.g.sc79.3 Carica papaya HOM05D005777 ORTHO05D006854 1.2e-37 162.2 440 31.6
VMungo0251G0419 Vigna mungo HOM05D003100 ORTHO05D003533 1.2e-37 162.2 215 43.7
Eucgr.E00956 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.0e-37 159.5 213 44.1
Ah.12g052840 Amaranthus hybridus HOM05D005777 ORTHO05D006854 1.9e-33 148.3 275 37.1
Ca_17460_v3 Cicer arietinum L. HOM05D005777 ORTHO05D006854 2.4e-33 147.9 429 29.6
HPP92_024143 Vanilla planifolia HOM05D005777 ORTHO05D006854 2.4e-33 147.9 268 36.6
Migut.E01651 Erythranthe guttata HOM05D005777 ORTHO05D006854 7.0e-33 146.4 254 39.0
Migut.E00735 Erythranthe guttata HOM05D005777 ORTHO05D006854 2.7e-32 144.4 247 38.1
Ciclev10023944m.g Citrus clementina HOM05D005777 ORTHO05D006854 1.7e-31 141.7 178 44.4
COL.COLO4_25066 Corchorus olitorius HOM05D000316 ORTHO05D006854 2.3e-31 141.4 196 42.9
Lsat_1_v5_gn_5_82800 Lactuca sativa HOM05D005777 ORTHO05D006854 2.3e-31 141.4 177 44.6
Oeu055021.1 Olea europaea HOM05D005777 ORTHO05D006854 2.5e-30 137.9 611 26.5
Manes.01G049500 Manihot esculenta HOM05D005777 ORTHO05D006854 3.3e-30 137.5 273 34.4
CiPaw.11G117200 Carya illinoinensis HOM05D005777 ORTHO05D006854 3.6e-29 134.0 255 35.7
Sc01g0010430 Simmondsia chinensis HOM05D005777 ORTHO05D006854 6.2e-29 133.3 234 37.2
Cc08_g16390 Coffea canephora HOM05D005777 ORTHO05D006854 1.1e-28 132.5 238 37.8
Hund14203 Selenicereus undatus HOM05D005777 ORTHO05D006854 4.0e-28 130.6 248 35.5
Dinv37498 Davidia involucrata HOM05D005777 ORTHO05D006854 1.5e-27 128.6 536 28.2
ATR0602G092 Amborella trichopoda HOM05D005777 ORTHO05D006854 4.4e-27 127.1 340 30.3
Duzib116G0305 Durio zibethinus HOM05D005777 ORTHO05D006854 5.8e-27 126.7 198 37.9
EL10Ac5g12951 Beta vulgaris HOM05D005777 ORTHO05D006854 1.1e-25 122.5 246 33.3
AUR62019875 Chenopodium quinoa HOM05D005777 ORTHO05D006854 1.9e-25 121.7 199 38.7
Eucgr.E00752 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.1e-25 120.6 654 24.2
GSVIVG01019597001 Vitis vinifera HOM05D005777 ORTHO05D006854 5.4e-25 120.2 110 56.4
Eucgr.E00762 Eucalyptus grandis HOM05D005777 ORTHO05D006854 6.0e-24 116.7 258 31.8
Lsat_1_v5_gn_9_112141 Lactuca sativa HOM05D005777 ORTHO05D006854 3.3e-22 110.9 91 59.3
Gorai.005G117300 Gossypium raimondii HOM05D005777 ORTHO05D006854 7.3e-22 109.8 248 31.9
Gohir.A02G088000 Gossypium hirsutum HOM05D005777 ORTHO05D006854 1.4e-20 105.5 227 30.8
SGA_v2.0_scaffold74G24601 Striga asiatica HOM05D005777 ORTHO05D006854 4.0e-20 104.0 237 32.5
Os09g0363400 Oryza sativa ssp. japonica HOM05D005777 ORTHO05D006854 2.2e-18 98.2 218 28.9
Eucgr.E00895 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-17 94.7 86 51.2
Eucgr.E00939 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.1e-17 94.0 198 32.8
CDE03G0022 Ceratophyllum demersum HOM05D002476 ORTHO05D002652 1.6e-16 92.0 213 32.4
Eucgr.E00894 Eucalyptus grandis HOM05D005777 ORTHO05D006854 8.6e-15 86.3 72 62.5
Eucgr.E00686 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.1e-12 79.3 80 55.0
SHI06955 Sapria himalayana HOM05D005777 ORTHO05D006854 3.1e-12 77.8 69 58.0
Thhalv10028849m.g Eutrema salsugineum HOM05D005777 ORTHO05D006854 4.4e-11 73.9 88 42.0
AUR62007011 Chenopodium quinoa HOM05D005777 ORTHO05D006854 5.8e-11 73.6 207 31.9
BraA09t38398Z Brassica rapa HOM05D005777 ORTHO05D006854 7.6e-11 73.2 82 47.6
AagrBONN_evm.TU.Sc2ySwM_368.2767 Anthoceros agrestis HOM05D005777 ORTHO05D006854 1.7e-10 72.0 162 30.9
Aa31LG9G11240 Aethionema arabicum HOM05D005777 ORTHO05D006854 2.9e-10 71.2 88 43.2
THA.LOC104813047 Tarenaya hassleriana HOM05D005777 ORTHO05D006854 3.8e-10 70.9 89 42.7
Sp6g06640 Schrenkiella parvula HOM05D005777 ORTHO05D006854 4.9e-10 70.5 91 41.8
CARHR255730 Cardamine hirsuta HOM05D005777 ORTHO05D006854 1.1e-09 69.3 89 42.7
BcaB01g01556 Brassica carinata HOM05D005777 ORTHO05D006854 1.4e-09 68.9 75 49.3
Eucgr.E00726 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-09 68.2 102 36.3
Eucgr.E00912 Eucalyptus grandis HOM05D005777 ORTHO05D006854 2.4e-09 68.2 102 36.3
AL6G44960 Arabidopsis lyrata HOM05D005777 ORTHO05D006854 3.2e-09 67.8 88 39.8
Eucgr.E00696 Eucalyptus grandis HOM05D005777 ORTHO05D006854 7.1e-09 66.6 102 35.3
AT4G10890 Arabidopsis thaliana HOM05D005777 ORTHO05D006854 9.2e-09 66.2 100 37.0
BcaC04g21086 Brassica carinata HOM05D005777 ORTHO05D006854 9.2e-09 66.2 77 45.5
C09p35860 Brassica napus HOM05D005777 ORTHO05D006854 9.2e-09 66.2 77 45.5
Eucgr.E00900 Eucalyptus grandis HOM05D005777 ORTHO05D006854 1.2e-08 65.9 83 42.2
Carub.0006s2962 Capsella rubella HOM05D005777 ORTHO05D006854 3.5e-08 64.3 89 37.1
Eucgr.E00749 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.6e-08 63.9 102 35.3
Eucgr.E00969 Eucalyptus grandis HOM05D005777 ORTHO05D006854 4.6e-08 63.9 102 35.3
BolC9t56419H Brassica oleracea HOM05D005777 ORTHO05D006854 1.0e-07 62.8 77 44.2
A09p28290 Brassica napus HOM05D005777 ORTHO05D006854 2.3e-07 61.6 67 46.3
Ciclev10023874m.g Citrus clementina HOM05D005777 ORTHO05D006854 2.3e-07 61.6 93 35.5
Gohir.D02G103200 Gossypium hirsutum HOM05D005777 ORTHO05D006854 3.0e-07 61.2 171 27.5
HanXRQChr03g0083731 Helianthus annuus HOM05D005777 ORTHO05D006854 3.9e-07 60.8 85 43.5
Eucgr.E01013 Eucalyptus grandis HOM05D005777 ORTHO05D006854 5.1e-07 60.5 102 34.3
Lsat_1_v5_gn_3_40061 Lactuca sativa HOM05D005777 ORTHO05D006854 5.1e-07 60.5 35 71.4
QL08p034398 Quercus lobata HOM05D000176 ORTHO05D000106 6.6e-07 60.1 78 41.0
Actinidia27306 Actinidia chinensis HOM05D005777 ORTHO05D006854 1.9e-06 58.5 67 41.8
FAN04G0565 Fragaria x ananassa HOM05D005777 ORTHO05D006854 1.9e-06 58.5 81 38.3
QL06p042986 Quercus lobata HOM05D000529 ORTHO05D000472 1.9e-06 58.5 73 42.5


User provided reference genes

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