Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006487 Daucus carota HOM05D007590 ORTHO05D007875 9.8e-53 209.9 110 100.0
Rhsim02G0243500 Rhododendron simsii HOM05D007590 ORTHO05D007875 7.6e-21 104.0 111 56.8
CSS0045762 Camellia sinensis var. sinensis HOM05D007590 ORTHO05D007875 1.1e-16 90.1 111 52.3
Dinv38831 Davidia involucrata HOM05D005474 ORTHO05D006551 1.1e-16 90.1 109 53.2
Hma1.2p1_1746F.1_g300410 Hydrangea macrophylla HOM05D007590 ORTHO05D007875 7.3e-16 87.4 117 50.4
CiPaw.11G121300 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.1e-14 83.6 112 45.5
Manes.02G009900 Manihot esculenta HOM05D007590 ORTHO05D007875 1.1e-14 83.6 116 47.4
Aqoxy5G04230 Aquilegia oxysepala HOM05D007590 ORTHO05D007875 1.4e-14 83.2 109 45.0
Peaxi162Scf00074g00097 Petunia axillaris HOM05D007590 ORTHO05D007875 2.4e-14 82.4 90 57.8
CiPaw.12G082900 Carya illinoinensis HOM05D007590 ORTHO05D007875 3.1e-14 82.0 113 48.7
Cfa012011 Carpinus fangiana HOM05D007590 ORTHO05D007875 5.2e-14 81.3 125 44.8
Prupe.5G120200 Prunus persica HOM05D007590 ORTHO05D007875 5.2e-14 81.3 117 48.7
Manes.02G010000 Manihot esculenta HOM05D007590 ORTHO05D007875 1.5e-13 79.7 113 46.9
QL02p030422 Quercus lobata HOM05D007590 ORTHO05D007875 5.8e-13 77.8 118 44.9
MSTRG.25673 Avicennia marina HOM05D007590 ORTHO05D007875 9.9e-13 77.0 111 45.0
FAN13G0413 Fragaria x ananassa HOM05D007590 ORTHO05D007875 9.9e-13 77.0 115 41.7
Potri.001G091500 Populus trichocarpa HOM05D007590 ORTHO05D007875 1.3e-12 76.6 112 46.4
TAR374G1746 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.3e-12 76.6 110 47.3
FAN04G0970 Fragaria x ananassa HOM05D007590 ORTHO05D007875 1.7e-12 76.3 115 41.7
Nn1g01873 Nelumbo nucifera HOM05D007590 ORTHO05D007875 1.7e-12 76.3 111 47.7
FAN08G0943 Fragaria x ananassa HOM05D007590 ORTHO05D007875 2.2e-12 75.9 115 41.7
PGSC0003DMG400012280 Solanum tuberosum HOM05D007590 ORTHO05D007875 3.8e-12 75.1 108 49.1
AUR62019841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 6.4e-12 74.3 111 45.0
Medtr5g009260 Medicago truncatula HOM05D007590 ORTHO05D007875 6.4e-12 74.3 107 42.1
Glyma.01G225600 Glycine max HOM05D007590 ORTHO05D007875 1.1e-11 73.6 109 45.9
TAR636G1032 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.1e-11 73.6 107 43.0
Actinidia22161 Actinidia chinensis HOM05D007590 ORTHO05D007875 1.4e-11 73.2 104 47.1
Peaxi162Scf00102g00178 Petunia axillaris HOM05D007590 ORTHO05D007875 1.4e-11 73.2 113 46.0
Phvul.002G164500 Phaseolus vulgaris HOM05D007590 ORTHO05D007875 1.4e-11 73.2 107 43.9
AUR62010841 Chenopodium quinoa HOM05D007590 ORTHO05D007875 1.9e-11 72.8 111 45.9
Sabra03G0101100 Salix brachista HOM05D007590 ORTHO05D007875 1.9e-11 72.8 112 45.5
TAR375G1006 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.9e-11 72.8 111 45.0
Potri.003G140100 Populus trichocarpa HOM05D007590 ORTHO05D007875 3.2e-11 72.0 111 42.3
RcHm_v2.0_Chr7g0194781 Rosa chinensis HOM05D007590 ORTHO05D007875 3.2e-11 72.0 116 41.4
MSTRG.11924 Avicennia marina HOM05D007590 ORTHO05D007875 4.2e-11 71.6 107 43.9
Lalb_Chr05g0211541 Lupinus albus HOM05D007590 ORTHO05D007875 4.2e-11 71.6 109 41.3
SalBow1G4032 Salvia bowleyana HOM05D007590 ORTHO05D007875 4.2e-11 71.6 106 42.5
SalBow1G6340 Salvia bowleyana HOM05D007590 ORTHO05D007875 4.2e-11 71.6 106 42.5
Cpa.g.sc79.34 Carica papaya HOM05D007590 ORTHO05D007875 5.4e-11 71.2 113 43.4
HanXRQChr03g0083501 Helianthus annuus HOM05D007590 ORTHO05D007875 5.4e-11 71.2 105 43.8
TAR629G1835 Trochodendron aralioides HOM05D007590 ORTHO05D007875 5.4e-11 71.2 111 44.1
CANSAT21G0370 Cannabis sativa HOM05D007590 ORTHO05D007875 7.1e-11 70.9 131 45.0
LjContig00312_ERROPOS870357g0000452 Lotus japonicus HOM05D007590 ORTHO05D007875 9.3e-11 70.5 117 43.6
Solyc08g082370.1 Solanum lycopersicum HOM05D007590 ORTHO05D007875 9.3e-11 70.5 108 48.1
Sopen08g030630 Solanum pennellii HOM05D007590 ORTHO05D007875 9.3e-11 70.5 108 48.1
Lsat_1_v5_gn_6_83961 Lactuca sativa HOM05D007590 ORTHO05D007875 2.1e-10 69.3 105 44.8
Ah.12g052560 Amaranthus hybridus HOM05D007590 ORTHO05D007875 2.7e-10 68.9 119 38.7
Thecc.03G298200 Theobroma cacao HOM05D007590 ORTHO05D007875 2.7e-10 68.9 116 38.8
Nitab4.5_0002782g0040 Nicotiana tabacum HOM05D007590 ORTHO05D007875 3.5e-10 68.6 101 47.5
Nn3g19015 Nelumbo nucifera HOM05D007590 ORTHO05D007875 7.8e-10 67.4 112 43.8
CiPaw.12G082700 Carya illinoinensis HOM05D007590 ORTHO05D007875 1.0e-09 67.0 110 41.8
PGSC0003DMG400005790 Solanum tuberosum HOM05D007590 ORTHO05D007875 1.0e-09 67.0 111 45.9
TAR629G2201 Trochodendron aralioides HOM05D007590 ORTHO05D007875 1.0e-09 67.0 112 43.8
Cc08_g16080 Coffea canephora HOM05D007590 ORTHO05D007875 1.3e-09 66.6 116 47.4
Sopen08g004200 Solanum pennellii HOM05D007590 ORTHO05D007875 1.3e-09 66.6 110 42.7
TWI60G0225 Tripterygium wilfordii HOM05D007590 ORTHO05D007875 1.3e-09 66.6 116 46.6
TPR.G25602 Trifolium pratense HOM05D007590 ORTHO05D007875 2.3e-09 65.9 107 37.4
Nitab4.5_0001231g0140 Nicotiana tabacum HOM05D007590 ORTHO05D007875 3.0e-09 65.5 101 45.5
Sed0026863 Sechium edule HOM05D007590 ORTHO05D007875 3.9e-09 65.1 125 40.8
Duzib205G1174 Durio zibethinus HOM05D007590 ORTHO05D007875 5.1e-09 64.7 110 39.1
Glyma.11G017400 Glycine max HOM05D007590 ORTHO05D007875 5.1e-09 64.7 116 44.0
Sabra01G0067900 Salix brachista HOM05D007590 ORTHO05D007875 5.1e-09 64.7 107 44.9
Manes.01G049200 Manihot esculenta HOM05D007590 ORTHO05D007875 6.6e-09 64.3 105 43.8
Ca_24513_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 8.7e-09 63.9 107 39.3
Ca_29733_v3 Cicer arietinum L. HOM05D007590 ORTHO05D007875 8.7e-09 63.9 107 39.3
Oeu063521.1 Olea europaea HOM05D007590 ORTHO05D007875 1.1e-08 63.5 110 40.0
EL10Ac5g12916 Beta vulgaris HOM05D007590 ORTHO05D007875 1.5e-08 63.2 85 49.4
Sed0003477 Sechium edule HOM05D007590 ORTHO05D007875 2.5e-08 62.4 65 52.3
Duzib068G0902 Durio zibethinus HOM05D007590 ORTHO05D007875 4.3e-08 61.6 99 39.4
Duzib084G0874 Durio zibethinus HOM05D007590 ORTHO05D007875 7.3e-08 60.8 107 41.1
Duzib068G0682 Durio zibethinus HOM05D007590 ORTHO05D007875 9.6e-08 60.5 114 37.7
Lsat_1_v5_gn_3_10720 Lactuca sativa HOM05D007590 ORTHO05D007875 1.6e-07 59.7 110 39.1
MELO3C016294.2 Cucumis melo HOM05D007590 ORTHO05D007875 2.1e-07 59.3 69 53.6
Gohir.D12G237700 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.1e-07 59.3 107 40.2
Gohir.D12G237966 Gossypium hirsutum HOM05D007590 ORTHO05D007875 2.1e-07 59.3 107 40.2
Gorai.008G254500 Gossypium raimondii HOM05D007590 ORTHO05D007875 2.1e-07 59.3 107 41.1
Aa31LG2G1420 Aethionema arabicum HOM05D010600 ORTHO05D007875 4.8e-07 58.2 119 36.1
COL.COLO4_10703 Corchorus olitorius HOM05D007590 ORTHO05D007875 4.8e-07 58.2 69 50.7
CsaV3_4G006590 Cucumis sativus L. HOM05D007590 ORTHO05D007875 4.8e-07 58.2 112 41.1
Gohir.A12G236500 Gossypium hirsutum HOM05D007590 ORTHO05D007875 6.2e-07 57.8 111 39.6
SGA_v2.0_scaffold305G47972 Striga asiatica HOM05D007590 ORTHO05D007875 6.2e-07 57.8 106 42.5
Migut.A00642 Erythranthe guttata HOM05D007590 ORTHO05D007875 8.1e-07 57.4 105 41.0
CDE10G0175 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 1.1e-06 57.0 103 40.8
Sc07g0010040 Simmondsia chinensis HOM05D007590 ORTHO05D007875 1.1e-06 57.0 130 40.0
Thhalv10023875m.g Eutrema salsugineum HOM05D010600 ORTHO05D007875 2.4e-06 55.8 119 34.5
CDE10G0927 Ceratophyllum demersum HOM05D007590 ORTHO05D007875 3.1e-06 55.5 103 41.7
ClCG07G011620 Citrullus lanatus HOM05D007590 ORTHO05D007875 5.3e-06 54.7 73 49.3
MBI06_g08455_MAGBIO Magnolia biondii HOM05D007590 ORTHO05D007875 5.3e-06 54.7 108 35.2


User provided reference genes

Program Settings