Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006457 Daucus carota HOM05D011460 ORTHO05D010383 8.1e-106 387.1 200 100.0
Nitab4.5_0021955g0010 Nicotiana tabacum HOM05D011460 ORTHO05D010383 8.3e-26 121.3 203 41.9
Lsat_1_v5_gn_2_113841 Lactuca sativa HOM05D011460 ORTHO05D010383 2.7e-24 116.3 168 48.2
Dinv11796 Davidia involucrata HOM05D000336 ORTHO05D002705 3.5e-24 115.9 181 44.2
Nitab4.5_0005460g0040 Nicotiana tabacum HOM05D011460 ORTHO05D010383 2.3e-23 113.2 163 44.2
Peaxi162Scf00254g00044 Petunia axillaris HOM05D011460 ORTHO05D010383 1.1e-17 94.4 166 41.0
Oeu026427.1 Olea europaea HOM05D011460 ORTHO05D010383 1.9e-17 93.6 220 34.5
Peaxi162Scf00890g00013 Petunia axillaris HOM05D011460 ORTHO05D010383 3.2e-17 92.8 166 42.2
Solyc11g008750.1 Solanum lycopersicum HOM05D011460 ORTHO05D010383 9.2e-17 91.3 187 36.9
Hma1.2p1_2080F.1_g313480 Hydrangea macrophylla HOM05D011460 ORTHO05D010383 3.5e-16 89.4 209 34.9
MSTRG.27468 Avicennia marina HOM05D011460 ORTHO05D010383 4.6e-16 89.0 201 35.3
Rhsim09G0153300 Rhododendron simsii HOM05D005690 ORTHO05D007075 8.6e-15 84.7 172 38.4
PGSC0003DMG400016243 Solanum tuberosum HOM05D011460 ORTHO05D010383 8.6e-15 84.7 137 42.3
Actinidia26624 Actinidia chinensis HOM05D002163 ORTHO05D002386 1.9e-14 83.6 168 36.3
Actinidia28951 Actinidia chinensis HOM05D011460 ORTHO05D010383 1.9e-14 83.6 168 35.7
MSTRG.9176 Avicennia marina HOM05D011460 ORTHO05D010383 1.2e-13 80.9 173 37.6
Migut.F01990 Erythranthe guttata HOM05D011460 ORTHO05D010383 1.4e-12 77.4 211 31.8
Thecc.09G173200 Theobroma cacao HOM05D003020 ORTHO05D003226 1.2e-11 74.3 206 33.0
Duzib168G2116 Durio zibethinus HOM05D003020 ORTHO05D003226 3.8e-10 69.3 202 31.7
Lalb_Chr03g0036011 Lupinus albus HOM05D003020 ORTHO05D003226 3.8e-10 69.3 181 32.6
TAR383G0288 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.8e-10 69.3 175 34.3
Phvul.007G092400 Phaseolus vulgaris HOM05D003020 ORTHO05D003226 6.4e-10 68.6 173 35.3
Actinidia03033 Actinidia chinensis HOM05D011460 ORTHO05D010383 8.4e-10 68.2 180 33.3
Dinv31354 Davidia involucrata HOM05D003020 ORTHO05D003226 8.4e-10 68.2 163 35.6
FAN10G0626 Fragaria x ananassa HOM05D003020 ORTHO05D003226 8.4e-10 68.2 201 30.3
CANSAT11G1249 Cannabis sativa HOM05D003020 ORTHO05D003226 3.2e-09 66.2 213 30.5
FAN06G0496 Fragaria x ananassa HOM05D003020 ORTHO05D003226 3.2e-09 66.2 216 29.2
FAN03G1700 Fragaria x ananassa HOM05D003020 ORTHO05D003226 4.1e-09 65.9 201 29.9
ClCG06G013330 Citrullus lanatus HOM05D003020 ORTHO05D003226 5.4e-09 65.5 212 30.7
FvH4_7g20070 Fragaria vesca HOM05D003020 ORTHO05D003226 5.4e-09 65.5 216 29.2
VMungo0720G0200 Vigna mungo HOM05D003020 ORTHO05D003226 5.4e-09 65.5 177 33.9
Actinidia07721 Actinidia chinensis HOM05D003020 ORTHO05D003226 9.2e-09 64.7 189 31.7
MELO3C017464.2 Cucumis melo HOM05D003020 ORTHO05D003226 9.2e-09 64.7 208 31.2
TAR626G0085 Trochodendron aralioides HOM05D003020 ORTHO05D003226 9.2e-09 64.7 188 33.5
Gorai.004G031500 Gossypium raimondii HOM05D003020 ORTHO05D003226 1.2e-08 64.3 213 29.6
COL.COLO4_35897 Corchorus olitorius HOM05D003020 ORTHO05D003226 1.6e-08 63.9 200 31.0
Cpa.g.sc95.49 Carica papaya HOM05D003020 ORTHO05D003226 2.1e-08 63.5 210 30.5
Haze_22098 Corylus avellana HOM05D003020 ORTHO05D003226 3.5e-08 62.8 195 33.8
RcHm_v2.0_Chr1g0363961 Rosa chinensis HOM05D010935 ORTHO05D010383 4.6e-08 62.4 204 33.3
Sed0024933 Sechium edule HOM05D003020 ORTHO05D003226 4.6e-08 62.4 199 32.2
CiPaw.01G275300 Carya illinoinensis HOM05D010935 ORTHO05D010383 6.0e-08 62.0 207 31.9
CsaV3_1G031590 Cucumis sativus L. HOM05D003020 ORTHO05D003226 6.0e-08 62.0 210 30.5
Oeu025224.1 Olea europaea HOM05D003020 ORTHO05D003226 6.0e-08 62.0 171 31.6
TAR626G1849 Trochodendron aralioides HOM05D003020 ORTHO05D003226 6.0e-08 62.0 192 33.3
CsaV3_5G025880 Cucumis sativus L. HOM05D040659 ORTHO05D010383 7.8e-08 61.6 190 28.9
TAR383G0698 Trochodendron aralioides HOM05D003020 ORTHO05D003226 7.8e-08 61.6 214 32.2
Duzib150G1089 Durio zibethinus HOM05D003020 ORTHO05D003226 1.0e-07 61.2 174 30.5
Manes.10G043900 Manihot esculenta HOM05D010162 ORTHO05D010383 1.3e-07 60.8 163 31.3
Actinidia04141 Actinidia chinensis HOM05D003020 ORTHO05D003226 1.7e-07 60.5 185 29.2
Eucgr.G02810 Eucalyptus grandis HOM05D010935 ORTHO05D010383 1.7e-07 60.5 198 29.3
Gohir.D08G033900 Gossypium hirsutum HOM05D003020 ORTHO05D003226 1.7e-07 60.5 190 30.5
Gohir.A08G084400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 2.3e-07 60.1 172 32.6
Gohir.D08G094000 Gossypium hirsutum HOM05D003020 ORTHO05D003226 2.3e-07 60.1 173 32.4
FAN01G2770 Fragaria x ananassa HOM05D010935 ORTHO05D010383 3.0e-07 59.7 193 33.2
Prupe.2G217400 Prunus persica HOM05D003020 ORTHO05D003226 3.0e-07 59.7 196 31.1
Sed0018084 Sechium edule HOM05D003020 ORTHO05D003226 3.0e-07 59.7 197 30.5
Gohir.A08G023400 Gossypium hirsutum HOM05D003020 ORTHO05D003226 3.9e-07 59.3 192 31.2
Migut.J01478 Erythranthe guttata HOM05D003020 ORTHO05D003226 5.1e-07 58.9 191 29.8
Lj5g0002057 Lotus japonicus HOM05D003020 ORTHO05D003226 5.1e-07 58.9 138 34.8
Lalb_Chr19g0129551 Lupinus albus HOM05D003020 ORTHO05D003226 5.1e-07 58.9 187 31.6
Eucgr.J01114 Eucalyptus grandis HOM05D003020 ORTHO05D003226 6.6e-07 58.5 225 27.6
TAR383G0645 Trochodendron aralioides HOM05D003020 ORTHO05D003226 6.6e-07 58.5 219 31.5
vmacro21034 Vaccinium macrocarpon HOM05D006638 ORTHO05D008246 6.6e-07 58.5 55 56.4
Cfa013505 Carpinus fangiana HOM05D003020 ORTHO05D003226 8.7e-07 58.2 195 32.8
FAN10G0666 Fragaria x ananassa HOM05D010935 ORTHO05D010383 8.7e-07 58.2 193 32.6
Glyma.10G213000 Glycine max HOM05D003020 ORTHO05D003226 8.7e-07 58.2 191 34.6
Prupe.2G217100 Prunus persica HOM05D010935 ORTHO05D010383 8.7e-07 58.2 162 34.0
Glyma.20G178000 Glycine max HOM05D003020 ORTHO05D003226 1.1e-06 57.8 199 34.2
Manes.10G044000 Manihot esculenta HOM05D010162 ORTHO05D010383 1.1e-06 57.8 163 30.7
Oeu042166.1 Olea europaea HOM05D003020 ORTHO05D003226 1.1e-06 57.8 206 29.1
TWI38G1817 Tripterygium wilfordii HOM05D003020 ORTHO05D003226 1.1e-06 57.8 183 31.1
Dinv11798 Davidia involucrata HOM05D003020 ORTHO05D003226 1.5e-06 57.4 176 29.0
Hma1.2p1_0453F.1_g156030 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 1.5e-06 57.4 164 31.7
Dinv41250 Davidia involucrata HOM05D003020 ORTHO05D003226 1.9e-06 57.0 197 28.4
Sed0002867 Sechium edule HOM05D003020 ORTHO05D003226 1.9e-06 57.0 195 31.8
Duzib170G0355 Durio zibethinus HOM05D003020 ORTHO05D003226 3.3e-06 56.2 210 31.4
TAR625G0330 Trochodendron aralioides HOM05D003020 ORTHO05D003226 3.3e-06 56.2 202 30.2
MELO3C002880.2 Cucumis melo HOM05D040659 ORTHO05D010383 4.3e-06 55.8 167 31.1
Hma1.2p1_1025F.1_g249270 Hydrangea macrophylla HOM05D003020 ORTHO05D003226 5.6e-06 55.5 201 29.9
QL08p056651 Quercus lobata HOM05D000336 ORTHO05D002705 5.6e-06 55.5 219 27.9
TAR383G0860 Trochodendron aralioides HOM05D003020 ORTHO05D003226 5.6e-06 55.5 208 32.7
CiPaw.08G036400 Carya illinoinensis HOM05D003020 ORTHO05D003226 7.3e-06 55.1 207 30.9
Thhalv10026023m.g Eutrema salsugineum HOM05D003020 ORTHO05D003226 7.3e-06 55.1 214 27.6
FAN03G3034 Fragaria x ananassa HOM05D010935 ORTHO05D010383 7.3e-06 55.1 196 32.1
Rhsim01G0004800 Rhododendron simsii HOM05D003020 ORTHO05D003226 9.6e-06 54.7 192 26.0


User provided reference genes

Program Settings