Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006367 Daucus carota HOM05D012822 ORTHO05D178447 1.3e-140 503.1 256 100.0
DCAR_006355 Daucus carota HOM05D012822 ORTHO05D177086 8.9e-57 224.6 122 92.6
DCAR_006369 Daucus carota HOM05D012822 ORTHO05D178502 4.8e-26 122.5 112 64.3
DCAR_006365 Daucus carota HOM05D012822 ORTHO05D175367 2.4e-25 120.2 112 62.5
DCAR_006361 Daucus carota HOM05D012822 ORTHO05D176214 2.2e-23 113.6 110 62.7
DCAR_006359 Daucus carota HOM05D012822 ORTHO05D174945 1.3e-20 104.4 108 61.1
PGR119G1837 Punica granatum HOM05D000244 ORTHO05D000179 4.5e-08 62.8 73 47.9
Atru.chr3.2755 Acer truncatum HOM05D000244 ORTHO05D000179 7.7e-08 62.0 83 44.6
CANSAT54G1689 Cannabis sativa HOM05D000244 ORTHO05D000179 7.7e-08 62.0 77 45.5
Lalb_Chr07g0195471 Lupinus albus HOM05D000244 ORTHO05D000179 1.3e-07 61.2 115 36.5
TAR633G1982 Trochodendron aralioides HOM05D000244 ORTHO05D000179 1.3e-07 61.2 81 44.4
ClCG03G012590 Citrullus lanatus HOM05D000244 ORTHO05D000179 1.7e-07 60.8 80 43.8
COL.COLO4_35670 Corchorus olitorius HOM05D000244 ORTHO05D000179 1.7e-07 60.8 73 47.9
Duzib170G0796 Durio zibethinus HOM05D000244 ORTHO05D000179 1.7e-07 60.8 80 45.0
TPR.G8485 Trifolium pratense HOM05D000244 ORTHO05D000179 1.7e-07 60.8 96 41.7
CsaV3_1G043400 Cucumis sativus L. HOM05D000244 ORTHO05D000179 3.8e-07 59.7 73 45.2
Potri.001G275700 Populus trichocarpa HOM05D000244 ORTHO05D000179 5.0e-07 59.3 77 48.1
Thecc.09G248900 Theobroma cacao HOM05D000244 ORTHO05D000179 5.0e-07 59.3 78 46.2
Duzib168G2152 Durio zibethinus HOM05D000244 ORTHO05D000179 6.5e-07 58.9 78 44.9
Gohir.A05G071100 Gossypium hirsutum HOM05D000244 ORTHO05D000179 6.5e-07 58.9 73 47.9
Haze_23214 Corylus avellana HOM05D000244 ORTHO05D000179 8.5e-07 58.5 81 45.7
Nn7g36703 Nelumbo nucifera HOM05D000244 ORTHO05D004919 8.5e-07 58.5 92 41.3
Sed0005110 Sechium edule HOM05D000244 ORTHO05D000179 8.5e-07 58.5 87 41.4
Gorai.009G075100 Gossypium raimondii HOM05D000244 ORTHO05D000179 1.1e-06 58.2 73 50.7
Lalb_Chr07g0195461 Lupinus albus HOM05D000244 ORTHO05D000179 1.1e-06 58.2 105 36.2
Ciclev10016163m.g Citrus clementina HOM05D000244 ORTHO05D000179 1.4e-06 57.8 75 46.7
Manes.01G178900 Manihot esculenta HOM05D000244 ORTHO05D000179 1.4e-06 57.8 73 46.6
Gohir.D05G074000 Gossypium hirsutum HOM05D000244 ORTHO05D000179 1.9e-06 57.4 73 50.7
Potri.009G070300 Populus trichocarpa HOM05D000244 ORTHO05D000179 1.9e-06 57.4 73 45.2
Gohir.A07G119700 Gossypium hirsutum HOM05D000244 ORTHO05D000179 2.5e-06 57.0 84 41.7
CiPaw.13G151100 Carya illinoinensis HOM05D000244 ORTHO05D000179 3.2e-06 56.6 82 47.6
Ca_27094_v3 Cicer arietinum L. HOM05D000244 ORTHO05D000179 3.2e-06 56.6 76 43.4
Sabra09G0053200 Salix brachista HOM05D000244 ORTHO05D000179 3.2e-06 56.6 73 42.5
arahy.Tifrunner.gnm1.ann1.JDDW1W Arachis hypogaea HOM05D000244 ORTHO05D000179 4.2e-06 56.2 90 38.9
MELO3C029353.2 Cucumis melo HOM05D000244 ORTHO05D000179 4.2e-06 56.2 91 39.6
Gohir.A09G106650 Gossypium hirsutum HOM05D000244 ORTHO05D000179 4.2e-06 56.2 85 41.2
Gohir.D07G123900 Gossypium hirsutum HOM05D000244 ORTHO05D000179 4.2e-06 56.2 84 41.7
Gorai.001G133900 Gossypium raimondii HOM05D000244 ORTHO05D000179 4.2e-06 56.2 84 41.7
QL01p017209 Quercus lobata HOM05D000244 ORTHO05D000179 4.2e-06 56.2 82 43.9
Actinidia06963 Actinidia chinensis HOM05D000244 ORTHO05D000179 5.5e-06 55.8 79 45.6
Actinidia16382 Actinidia chinensis HOM05D000244 ORTHO05D000179 5.5e-06 55.8 79 44.3
arahy.Tifrunner.gnm1.ann1.U4QFTB Arachis hypogaea HOM05D000244 ORTHO05D000179 5.5e-06 55.8 90 37.8
Ca_06212_v3 Cicer arietinum L. HOM05D000244 ORTHO05D000179 5.5e-06 55.8 110 37.3
arahy.Tifrunner.gnm1.ann1.PF419L Arachis hypogaea HOM05D000244 ORTHO05D000179 7.2e-06 55.5 76 43.4
arahy.Tifrunner.gnm1.ann1.XN3VW8 Arachis hypogaea HOM05D000244 ORTHO05D000179 7.2e-06 55.5 76 43.4
Dinv36169 Davidia involucrata HOM05D000244 ORTHO05D000179 7.2e-06 55.5 75 44.0
Lj1C280T0 Lonicera japonica HOM05D000244 ORTHO05D000179 7.2e-06 55.5 107 39.3
Gohir.D09G103350 Gossypium hirsutum HOM05D000244 ORTHO05D000179 9.4e-06 55.1 85 41.2
Gohir.D09G106550 Gossypium hirsutum HOM05D000244 ORTHO05D000179 9.4e-06 55.1 99 40.4
Gorai.006G120100 Gossypium raimondii HOM05D000244 ORTHO05D000179 9.4e-06 55.1 85 41.2
Gorai.006G124100 Gossypium raimondii HOM05D000244 ORTHO05D000179 9.4e-06 55.1 99 40.4
Lalb_Chr13g0290641 Lupinus albus HOM05D000244 ORTHO05D000179 9.4e-06 55.1 132 31.1


User provided reference genes

Program Settings