Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006361 Daucus carota HOM05D012822 ORTHO05D176214 2.1e-72 275.8 158 100.0
DCAR_006369 Daucus carota HOM05D012822 ORTHO05D178502 4.2e-57 224.9 149 88.6
DCAR_006365 Daucus carota HOM05D012822 ORTHO05D175367 3.6e-56 221.9 151 86.1
DCAR_006355 Daucus carota HOM05D012822 ORTHO05D177086 4.1e-52 208.4 150 72.7
DCAR_006359 Daucus carota HOM05D012822 ORTHO05D174945 7.5e-46 187.6 124 76.6
DCAR_006367 Daucus carota HOM05D012822 ORTHO05D178447 2.5e-25 119.4 110 62.7
DCAR_029560 Daucus carota HOM05D012822 ORTHO05D178574 9.5e-17 90.9 156 36.5
DCAR_029558 Daucus carota HOM05D012822 ORTHO05D176177 2.1e-16 89.7 122 39.3
DCAR_029559 Daucus carota HOM05D012822 ORTHO05D176008 2.1e-16 89.7 122 39.3
DCAR_031624 Daucus carota HOM05D012822 ORTHO05D176708 2.8e-16 89.4 148 35.1
DCAR_019866 Daucus carota HOM05D012822 ORTHO05D176266 1.5e-09 67.0 146 34.2
Actinidia16382 Actinidia chinensis HOM05D000244 ORTHO05D000179 2.1e-08 63.2 119 33.6
Actinidia24452 Actinidia chinensis HOM05D000244 ORTHO05D000179 2.8e-08 62.8 118 33.9
Actinidia06963 Actinidia chinensis HOM05D000244 ORTHO05D000179 3.6e-08 62.4 119 34.5
Ca_06212_v3 Cicer arietinum L. HOM05D000244 ORTHO05D000179 3.6e-08 62.4 162 28.4
Lj1C280T0 Lonicera japonica HOM05D000244 ORTHO05D000179 3.6e-08 62.4 151 28.5
DCAR_020000 Daucus carota HOM05D012822 ORTHO05D177058 4.7e-08 62.0 145 33.1
Medtr1g032910 Medicago truncatula HOM05D000244 ORTHO05D000179 1.1e-07 60.8 162 27.8
Psat2g020080 Pisum sativum HOM05D000244 ORTHO05D000179 1.4e-07 60.5 155 29.0
arahy.Tifrunner.gnm1.ann1.U4QFTB Arachis hypogaea HOM05D000244 ORTHO05D000179 3.1e-07 59.3 153 26.8
Ciclev10016163m.g Citrus clementina HOM05D000244 ORTHO05D000179 3.1e-07 59.3 123 32.5
arahy.Tifrunner.gnm1.ann1.JDDW1W Arachis hypogaea HOM05D000244 ORTHO05D000179 4.0e-07 58.9 153 26.8
Gohir.A02G078700 Gossypium hirsutum HOM05D000244 ORTHO05D004919 5.2e-07 58.5 122 30.3
Gohir.D02G085900 Gossypium hirsutum HOM05D000244 ORTHO05D004919 5.2e-07 58.5 122 30.3
Gorai.005G096700 Gossypium raimondii HOM05D000244 ORTHO05D004919 6.8e-07 58.2 122 30.3
PSO384G5120 Papaver somniferum HOM05D000244 ORTHO05D000179 6.8e-07 58.2 130 29.2
Psat5g185360 Pisum sativum HOM05D000244 ORTHO05D000179 6.8e-07 58.2 155 29.0
Psat5g113320 Pisum sativum HOM05D000244 ORTHO05D000179 8.9e-07 57.8 156 29.5
ATR0022G007 Amborella trichopoda HOM05D000244 ORTHO05D004919 1.2e-06 57.4 147 27.9
Hma1.2p1_3091F.1_g332540 Hydrangea macrophylla HOM05D000244 ORTHO05D000179 1.2e-06 57.4 118 32.2
PSO339G2886 Papaver somniferum HOM05D000244 ORTHO05D000179 1.2e-06 57.4 130 28.5
MBI13_g42344_MAGBIO Magnolia biondii HOM05D000244 ORTHO05D000179 1.5e-06 57.0 118 32.2
Lalb_Chr04g0249211 Lupinus albus HOM05D000244 ORTHO05D000179 2.0e-06 56.6 155 28.4
Medtr5g089700 Medicago truncatula HOM05D000244 ORTHO05D000179 2.0e-06 56.6 150 27.3
Potri.001G275700 Populus trichocarpa HOM05D000244 ORTHO05D000179 2.0e-06 56.6 132 30.3
TAR633G1982 Trochodendron aralioides HOM05D000244 ORTHO05D000179 2.6e-06 56.2 157 27.4
PSO017G6431 Papaver somniferum HOM05D000244 ORTHO05D004919 3.4e-06 55.8 123 29.3
arahy.Tifrunner.gnm1.ann1.PF419L Arachis hypogaea HOM05D000244 ORTHO05D000179 4.4e-06 55.5 146 27.4
arahy.Tifrunner.gnm1.ann1.XN3VW8 Arachis hypogaea HOM05D000244 ORTHO05D000179 4.4e-06 55.5 146 27.4
Atru.chr3.2755 Acer truncatum HOM05D000244 ORTHO05D000179 5.8e-06 55.1 149 28.9
Dinv36169 Davidia involucrata HOM05D000244 ORTHO05D000179 5.8e-06 55.1 119 30.3
Psat2g020480 Pisum sativum HOM05D000244 ORTHO05D000179 5.8e-06 55.1 155 25.8
Psat2g020360 Pisum sativum HOM05D000244 ORTHO05D000179 7.6e-06 54.7 157 26.1
Lalb_Chr07g0195471 Lupinus albus HOM05D000244 ORTHO05D000179 9.9e-06 54.3 128 26.6


User provided reference genes

Program Settings