Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006359 Daucus carota HOM05D012822 ORTHO05D174945 5.5e-102 374.4 200 100.0
DCAR_006355 Daucus carota HOM05D012822 ORTHO05D177086 8.8e-52 207.6 142 75.4
DCAR_006369 Daucus carota HOM05D012822 ORTHO05D178502 1.2e-48 197.2 132 75.8
DCAR_006365 Daucus carota HOM05D012822 ORTHO05D175367 5.0e-47 191.8 132 73.5
DCAR_006361 Daucus carota HOM05D012822 ORTHO05D176214 9.5e-46 187.6 124 76.6
DCAR_006367 Daucus carota HOM05D012822 ORTHO05D178447 1.1e-22 110.9 108 61.1
DCAR_029560 Daucus carota HOM05D012822 ORTHO05D178574 2.1e-16 90.1 167 32.9
DCAR_031624 Daucus carota HOM05D012822 ORTHO05D176708 2.7e-16 89.7 175 32.0
DCAR_029559 Daucus carota HOM05D012822 ORTHO05D176008 4.6e-16 89.0 135 35.6
DCAR_029558 Daucus carota HOM05D012822 ORTHO05D176177 1.7e-15 87.0 201 30.8
MBI13_g42344_MAGBIO Magnolia biondii HOM05D000244 ORTHO05D000179 1.7e-10 70.5 134 33.6
Dinv36169 Davidia involucrata HOM05D000244 ORTHO05D000179 2.2e-10 70.1 211 28.4
Gohir.D02G085900 Gossypium hirsutum HOM05D000244 ORTHO05D004919 3.8e-10 69.3 188 27.7
Gorai.005G096700 Gossypium raimondii HOM05D000244 ORTHO05D004919 6.4e-10 68.6 188 27.7
arahy.Tifrunner.gnm1.ann1.U4QFTB Arachis hypogaea HOM05D000244 ORTHO05D000179 8.4e-10 68.2 160 27.5
TAR633G1982 Trochodendron aralioides HOM05D000244 ORTHO05D000179 8.4e-10 68.2 201 26.9
Ciclev10016163m.g Citrus clementina HOM05D000244 ORTHO05D000179 1.1e-09 67.8 144 31.9
Gohir.A02G078700 Gossypium hirsutum HOM05D000244 ORTHO05D004919 1.1e-09 67.8 136 30.1
ATR0022G007 Amborella trichopoda HOM05D000244 ORTHO05D004919 1.4e-09 67.4 134 30.6
arahy.Tifrunner.gnm1.ann1.JDDW1W Arachis hypogaea HOM05D000244 ORTHO05D000179 2.4e-09 66.6 160 27.5
Ca_12015_v3 Cicer arietinum L. HOM05D000244 ORTHO05D000179 7.1e-09 65.1 143 31.5
Atru.chr3.2755 Acer truncatum HOM05D000244 ORTHO05D000179 1.6e-08 63.9 141 30.5
Manes.02G145600 Manihot esculenta HOM05D000244 ORTHO05D004919 2.1e-08 63.5 136 29.4
PSO384G5120 Papaver somniferum HOM05D000244 ORTHO05D000179 2.1e-08 63.5 148 29.7
Gohir.D05G223100 Gossypium hirsutum HOM05D000244 ORTHO05D004919 2.7e-08 63.2 147 28.6
Lalb_Chr07g0195471 Lupinus albus HOM05D000244 ORTHO05D000179 2.7e-08 63.2 153 25.5
Gorai.009G230300 Gossypium raimondii HOM05D000244 ORTHO05D004919 4.6e-08 62.4 211 24.6
Lj1C280T0 Lonicera japonica HOM05D000244 ORTHO05D000179 4.6e-08 62.4 138 29.7
CAN.G806.10 Capsicum annuum HOM05D000244 ORTHO05D004919 6.0e-08 62.0 150 28.7
Nn7g36703 Nelumbo nucifera HOM05D000244 ORTHO05D004919 6.0e-08 62.0 138 31.2
PSO017G6431 Papaver somniferum HOM05D000244 ORTHO05D004919 6.0e-08 62.0 147 30.6
Duzib093G0476 Durio zibethinus HOM05D000244 ORTHO05D004919 7.8e-08 61.6 136 28.7
Sed0005110 Sechium edule HOM05D000244 ORTHO05D000179 1.0e-07 61.2 134 28.4
Gohir.A05G220300 Gossypium hirsutum HOM05D000244 ORTHO05D004919 1.3e-07 60.8 207 24.2
Lalb_Chr07g0195461 Lupinus albus HOM05D000244 ORTHO05D000179 1.3e-07 60.8 142 26.1
PSO339G2886 Papaver somniferum HOM05D000244 ORTHO05D000179 1.3e-07 60.8 148 28.4
Manes.18G059800 Manihot esculenta HOM05D000244 ORTHO05D004919 1.7e-07 60.5 143 28.0
TAR628G0674 Trochodendron aralioides HOM05D000244 ORTHO05D004919 1.7e-07 60.5 145 29.0
Hma1.2p1_3091F.1_g332540 Hydrangea macrophylla HOM05D000244 ORTHO05D000179 2.3e-07 60.1 187 26.2
Nitab4.5_0000354g0170 Nicotiana tabacum HOM05D000244 ORTHO05D004919 2.3e-07 60.1 148 29.7
Thecc.08G069500 Theobroma cacao HOM05D000244 ORTHO05D004919 2.3e-07 60.1 136 29.4
VMungo1076G0001 Vigna mungo HOM05D000244 ORTHO05D004919 2.3e-07 60.1 137 31.4
Sabra05G0120300 Salix brachista HOM05D000244 ORTHO05D004919 3.9e-07 59.3 147 28.6
COL.COLO4_35218 Corchorus olitorius HOM05D000244 ORTHO05D004919 5.1e-07 58.9 182 25.3
DCAR_019866 Daucus carota HOM05D012822 ORTHO05D176266 5.1e-07 58.9 119 32.8
Psat5g185360 Pisum sativum HOM05D000244 ORTHO05D000179 6.6e-07 58.5 149 29.5
arahy.Tifrunner.gnm1.ann1.PF419L Arachis hypogaea HOM05D000244 ORTHO05D000179 8.7e-07 58.2 163 25.8
arahy.Tifrunner.gnm1.ann1.XN3VW8 Arachis hypogaea HOM05D000244 ORTHO05D000179 8.7e-07 58.2 163 25.8
Ciclev10001847m.g Citrus clementina HOM05D000244 ORTHO05D004919 8.7e-07 58.2 144 28.5
Gohir.A05G071100 Gossypium hirsutum HOM05D000244 ORTHO05D000179 8.7e-07 58.2 156 26.9
Lj4A89T40 Lonicera japonica HOM05D000244 ORTHO05D004919 8.7e-07 58.2 137 28.5
Nn2g14819 Nelumbo nucifera HOM05D000244 ORTHO05D000179 8.7e-07 58.2 142 29.6
Ca_06212_v3 Cicer arietinum L. HOM05D000244 ORTHO05D000179 1.1e-06 57.8 187 27.8
ClCG03G012590 Citrullus lanatus HOM05D000244 ORTHO05D000179 1.1e-06 57.8 198 28.3
Haze_22329 Corylus avellana HOM05D000244 ORTHO05D004919 1.1e-06 57.8 136 28.7
Nn5g29909 Nelumbo nucifera HOM05D000244 ORTHO05D004919 1.1e-06 57.8 138 27.5
AL8G23630 Arabidopsis lyrata HOM05D000244 ORTHO05D004919 1.5e-06 57.4 140 28.6
Potri.001G275700 Populus trichocarpa HOM05D000244 ORTHO05D000179 1.5e-06 57.4 148 29.7
BcaC01g04851 Brassica carinata HOM05D000244 ORTHO05D004919 1.9e-06 57.0 140 28.6
A03p27490 Brassica napus HOM05D000244 ORTHO05D004919 1.9e-06 57.0 140 28.6
C03p33150 Brassica napus HOM05D000244 ORTHO05D004919 1.9e-06 57.0 140 28.6
BolC3t15640H Brassica oleracea HOM05D000244 ORTHO05D004919 1.9e-06 57.0 140 28.6
BraA03t11962Z Brassica rapa HOM05D000244 ORTHO05D004919 1.9e-06 57.0 140 28.6
CANSAT54G1689 Cannabis sativa HOM05D000244 ORTHO05D000179 1.9e-06 57.0 158 27.8
Haze_23214 Corylus avellana HOM05D000244 ORTHO05D000179 1.9e-06 57.0 215 24.7
Os01g0953801 Oryza sativa ssp. japonica HOM05D000244 ORTHO05D000179 1.9e-06 57.0 140 33.6
PSO170G2434 Papaver somniferum HOM05D000244 ORTHO05D004919 1.9e-06 57.0 147 29.9
Gorai.009G075100 Gossypium raimondii HOM05D000244 ORTHO05D000179 2.5e-06 56.6 156 27.6
Nn1g05541 Nelumbo nucifera HOM05D000244 ORTHO05D004919 2.5e-06 56.6 138 26.8
TPR.G16028 Trifolium pratense HOM05D000244 ORTHO05D004919 2.5e-06 56.6 138 27.5
Atru.chr13.1028 Acer truncatum HOM05D000244 ORTHO05D004919 3.3e-06 56.2 144 29.2
Ca_27094_v3 Cicer arietinum L. HOM05D000244 ORTHO05D000179 3.3e-06 56.2 166 24.7
Glyma.02G213500 Glycine max HOM05D000244 ORTHO05D004919 3.3e-06 56.2 139 28.8
Zm00001eb101060 Zea mays HOM05D000244 ORTHO05D004919 3.3e-06 56.2 123 29.3
BcaB01g02948 Brassica carinata HOM05D000244 ORTHO05D004919 4.3e-06 55.8 191 27.2
Duzib116G0561 Durio zibethinus HOM05D000244 ORTHO05D004919 4.3e-06 55.8 136 27.2
Phvul.008G181100 Phaseolus vulgaris HOM05D000244 ORTHO05D004919 4.3e-06 55.8 136 27.2
Potri.002G105000 Populus trichocarpa HOM05D000244 ORTHO05D004919 4.3e-06 55.8 147 27.9
Potri.009G070300 Populus trichocarpa HOM05D000244 ORTHO05D000179 4.3e-06 55.8 220 24.5
Thecc.09G248900 Theobroma cacao HOM05D000244 ORTHO05D000179 4.3e-06 55.8 165 25.5
TPR.G8485 Trifolium pratense HOM05D000244 ORTHO05D000179 4.3e-06 55.8 156 25.6
TWI12G1174 Tripterygium wilfordii HOM05D000244 ORTHO05D004919 4.3e-06 55.8 141 24.1
TAR381G0576 Trochodendron aralioides HOM05D000244 ORTHO05D004919 4.3e-06 55.8 145 26.9
Aa31sc195G10 Aethionema arabicum HOM05D000244 ORTHO05D004919 5.6e-06 55.5 147 27.2
CARHR259140 Cardamine hirsuta HOM05D000244 ORTHO05D004919 5.6e-06 55.5 140 27.9
Cfa013688 Carpinus fangiana HOM05D000244 ORTHO05D004919 5.6e-06 55.5 136 27.9
CiPaw.07G166600 Carya illinoinensis HOM05D000244 ORTHO05D004919 5.6e-06 55.5 136 27.9
CiPaw.08G054900 Carya illinoinensis HOM05D000244 ORTHO05D004919 5.6e-06 55.5 198 24.7
Duzib168G2152 Durio zibethinus HOM05D000244 ORTHO05D000179 5.6e-06 55.5 151 28.5
Gohir.A07G119700 Gossypium hirsutum HOM05D000244 ORTHO05D000179 5.6e-06 55.5 209 26.3
Gohir.A09G106650 Gossypium hirsutum HOM05D000244 ORTHO05D000179 5.6e-06 55.5 144 24.3
Psat2g020080 Pisum sativum HOM05D000244 ORTHO05D000179 5.6e-06 55.5 143 30.1
TAR376G0027 Trochodendron aralioides HOM05D000244 ORTHO05D004919 5.6e-06 55.5 144 27.1
Ca_06213_v3 Cicer arietinum L. HOM05D000244 ORTHO05D000179 7.3e-06 55.1 141 28.4
COL.COLO4_35670 Corchorus olitorius HOM05D000244 ORTHO05D000179 7.3e-06 55.1 150 27.3
ECA232G4764 Erigeron canadensis HOM05D000244 ORTHO05D004919 7.3e-06 55.1 188 26.6
Gohir.A13G219000 Gossypium hirsutum HOM05D000244 ORTHO05D000179 7.3e-06 55.1 140 31.4
Gohir.D05G074000 Gossypium hirsutum HOM05D000244 ORTHO05D000179 7.3e-06 55.1 156 27.6
Nitab4.5_0001607g0050 Nicotiana tabacum HOM05D000244 ORTHO05D004919 7.3e-06 55.1 149 28.2
Carub.0008s0958 Capsella rubella HOM05D000244 ORTHO05D004919 9.6e-06 54.7 141 28.4
Duzib041G0591 Durio zibethinus HOM05D000244 ORTHO05D004919 9.6e-06 54.7 198 24.2


User provided reference genes

Program Settings