Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006353 Daucus carota HOM05D002054 ORTHO05D005362 1.6e-208 729.2 373 100.0
Lj3A930T58 Lonicera japonica HOM05D002054 ORTHO05D005362 4.5e-41 172.9 318 39.3
Dinv02552 Davidia involucrata HOM05D002054 ORTHO05D005362 2.1e-38 164.1 362 37.8
Cc02_g09940 Coffea canephora HOM05D002054 ORTHO05D005362 1.0e-32 145.2 295 37.3
Rhsim03G0104800 Rhododendron simsii HOM05D002054 ORTHO05D005362 7.2e-31 139.0 305 37.4
Migut.F01813 Erythranthe guttata HOM05D002054 ORTHO05D005362 3.0e-29 133.7 310 34.8
SGA_v2.0_scaffold122G33235 Striga asiatica HOM05D002054 ORTHO05D005362 3.0e-29 133.7 275 38.2
MSTRG.8169 Avicennia marina HOM05D002054 ORTHO05D005362 2.0e-28 131.0 336 35.1
SGA_v2.0_scaffold71G24042 Striga asiatica HOM05D002054 ORTHO05D005362 2.0e-28 131.0 264 39.0
Sabra08G0016300 Salix brachista HOM05D002054 ORTHO05D005362 2.6e-28 130.6 326 32.5
Nitab4.5_0006653g0050 Nicotiana tabacum HOM05D002054 ORTHO05D005362 4.4e-28 129.8 328 32.6
Actinidia34712 Actinidia chinensis HOM05D002054 ORTHO05D005362 4.8e-27 126.3 298 34.2
Actinidia31094 Actinidia chinensis HOM05D002054 ORTHO05D005362 6.3e-27 125.9 305 33.8
CAN.G640.25 Capsicum annuum HOM05D002054 ORTHO05D005362 6.3e-27 125.9 309 34.6
SalBow3G2625 Salvia bowleyana HOM05D002054 ORTHO05D005362 6.3e-27 125.9 272 35.3
SalBow3G0957 Salvia bowleyana HOM05D002054 ORTHO05D005362 8.2e-27 125.6 272 35.3
Oeu014439.1 Olea europaea HOM05D002054 ORTHO05D005362 1.1e-26 125.2 289 33.9
Peaxi162Scf00007g00182 Petunia axillaris HOM05D002054 ORTHO05D005362 4.1e-26 123.2 330 34.2
Sabra10G0183000 Salix brachista HOM05D002054 ORTHO05D005362 4.5e-25 119.8 299 32.8
Eucgr.G02706 Eucalyptus grandis HOM05D002054 ORTHO05D005362 7.7e-25 119.0 283 35.7
PGSC0003DMG400026179 Solanum tuberosum HOM05D002054 ORTHO05D005362 7.7e-25 119.0 303 32.0
Nitab4.5_0008821g0030 Nicotiana tabacum HOM05D002054 ORTHO05D005362 2.9e-24 117.1 297 33.7
Oeu055045.1 Olea europaea HOM05D002054 ORTHO05D005362 1.9e-23 114.4 266 35.7
Potri.008G024300 Populus trichocarpa HOM05D002054 ORTHO05D005362 2.5e-23 114.0 294 31.6
Manes.10G057400 Manihot esculenta HOM05D002054 ORTHO05D005362 3.2e-23 113.6 299 33.1
PGR142G4193 Punica granatum HOM05D002054 ORTHO05D005362 4.2e-23 113.2 301 33.6
Solyc07g053190.4 Solanum lycopersicum HOM05D002054 ORTHO05D005362 5.5e-23 112.8 361 29.6
Sopen07g026750 Solanum pennellii HOM05D002054 ORTHO05D005362 5.5e-23 112.8 314 30.6
Thecc.10G103600 Theobroma cacao HOM05D002054 ORTHO05D005362 9.4e-23 112.1 289 31.8
Haze_02583 Corylus avellana HOM05D002054 ORTHO05D005362 1.6e-22 111.3 304 31.6
CSS0009565 Camellia sinensis var. sinensis HOM05D002054 ORTHO05D005362 2.7e-22 110.5 198 35.9
Duzib128G0063 Durio zibethinus HOM05D002054 ORTHO05D005362 2.7e-22 110.5 288 33.3
Cfa011246 Carpinus fangiana HOM05D002054 ORTHO05D005362 4.7e-22 109.8 301 31.9
TWI63G1527 Tripterygium wilfordii HOM05D002054 ORTHO05D005362 1.8e-21 107.8 285 32.6
Potri.010G235900 Populus trichocarpa HOM05D002054 ORTHO05D005362 2.3e-21 107.5 304 30.3
arahy.Tifrunner.gnm1.ann1.KWLN2P Arachis hypogaea HOM05D002054 ORTHO05D005362 4.0e-21 106.7 265 35.8
Duzib114G0207 Durio zibethinus HOM05D002054 ORTHO05D005362 4.0e-21 106.7 305 32.1
Prupe.2G084200 Prunus persica HOM05D002054 ORTHO05D005362 5.2e-21 106.3 281 33.1
arahy.Tifrunner.gnm1.ann1.9TB0NK Arachis hypogaea HOM05D002054 ORTHO05D005362 6.7e-21 105.9 265 35.5
CiPaw.14G029800 Carya illinoinensis HOM05D002054 ORTHO05D005362 6.7e-21 105.9 305 31.8
TAR636G2980 Trochodendron aralioides HOM05D002054 ORTHO05D005362 1.2e-20 105.1 446 26.5
GSVIVG01034750001 Vitis vinifera HOM05D002054 ORTHO05D005362 2.0e-20 104.4 286 32.9
Gohir.D01G119300 Gossypium hirsutum HOM05D002054 ORTHO05D005362 9.7e-20 102.1 262 29.8
MD02G1255000 Malus domestica HOM05D002054 ORTHO05D005362 9.7e-20 102.1 302 31.8
Gohir.A01G130300 Gossypium hirsutum HOM05D002054 ORTHO05D005362 1.3e-19 101.7 299 32.8
Gorai.002G145600 Gossypium raimondii HOM05D002054 ORTHO05D005362 1.3e-19 101.7 262 29.8
Ciclev10030776m.g Citrus clementina HOM05D002054 ORTHO05D005362 2.2e-19 100.9 281 33.5
Lj5g0009616 Lotus japonicus HOM05D002054 ORTHO05D005362 2.8e-19 100.5 260 35.4
RcHm_v2.0_Chr1g0332951 Rosa chinensis HOM05D002054 ORTHO05D005362 3.7e-19 100.1 317 32.5
AUR62035516 Chenopodium quinoa HOM05D002054 ORTHO05D005362 4.8e-19 99.8 317 29.7
TAR633G2241 Trochodendron aralioides HOM05D002054 ORTHO05D005362 5.3e-18 96.3 328 28.7
FvH4_7g05840 Fragaria vesca HOM05D002054 ORTHO05D005362 9.1e-18 95.5 311 29.6
AUR62041547 Chenopodium quinoa HOM05D002054 ORTHO05D005362 1.2e-17 95.1 293 29.7
Aa31LG11G5500 Aethionema arabicum HOM05D002054 ORTHO05D005362 2.0e-17 94.4 272 30.5
BcaNung05852 Brassica carinata HOM05D002054 ORTHO05D005362 2.0e-17 94.4 254 29.5
FAN01G1518 Fragaria x ananassa HOM05D002054 ORTHO05D005362 3.5e-17 93.6 311 29.3
TWI38G0197 Tripterygium wilfordii HOM05D002054 ORTHO05D005362 3.5e-17 93.6 278 30.2
FAN06G2071 Fragaria x ananassa HOM05D002054 ORTHO05D005362 5.9e-17 92.8 312 29.5
AT5G04670 Arabidopsis thaliana HOM05D002054 ORTHO05D005362 7.7e-17 92.4 272 32.4
VMungo0720G2884 Vigna mungo HOM05D002054 ORTHO05D005362 7.7e-17 92.4 275 32.4
Lalb_Chr19g0129221 Lupinus albus HOM05D002054 ORTHO05D005362 1.7e-16 91.3 283 30.7
Lalb_Chr21g0313271 Lupinus albus HOM05D002054 ORTHO05D005362 2.2e-16 90.9 275 29.5
Atru.chr12.979 Acer truncatum HOM05D002054 ORTHO05D005362 2.9e-16 90.5 319 29.5
Ca_10503_v3 Cicer arietinum L. HOM05D002054 ORTHO05D005362 3.8e-16 90.1 246 30.9
Ca_26320_v3 Cicer arietinum L. HOM05D002054 ORTHO05D005362 5.0e-16 89.7 272 32.4
FAN10G2249 Fragaria x ananassa HOM05D002054 ORTHO05D005362 5.0e-16 89.7 357 28.6
THA.LOC104816460 Tarenaya hassleriana HOM05D002054 ORTHO05D005362 5.0e-16 89.7 273 31.5
Actinidia18586 Actinidia chinensis HOM05D002054 ORTHO05D005362 6.5e-16 89.4 289 29.4
Actinidia06702 Actinidia chinensis HOM05D002054 ORTHO05D005362 8.5e-16 89.0 290 28.3
Carub.0006s0357 Capsella rubella HOM05D002054 ORTHO05D005362 1.1e-15 88.6 275 31.3
SHI21295 Sapria himalayana HOM05D002054 ORTHO05D005362 1.1e-15 88.6 285 28.4
FAN03G2655 Fragaria x ananassa HOM05D002054 ORTHO05D005362 1.5e-15 88.2 308 30.2
BcaB01g05907 Brassica carinata HOM05D002054 ORTHO05D005362 1.9e-15 87.8 253 30.4
C03p02150 Brassica napus HOM05D002054 ORTHO05D005362 1.9e-15 87.8 253 30.4
BolC3t12767H Brassica oleracea HOM05D002054 ORTHO05D005362 1.9e-15 87.8 253 30.4
ClCG08G008170 Citrullus lanatus HOM05D002054 ORTHO05D005362 1.9e-15 87.8 331 32.0
AL6G14290 Arabidopsis lyrata HOM05D002054 ORTHO05D005362 3.2e-15 87.0 270 31.9
Lj5g0007986 Lotus japonicus HOM05D002054 ORTHO05D005362 3.2e-15 87.0 268 30.6
A03p01740 Brassica napus HOM05D002054 ORTHO05D005362 5.5e-15 86.3 256 30.5
Medtr1g092650 Medicago truncatula HOM05D002054 ORTHO05D005362 9.4e-15 85.5 247 31.2
Psat6g092960 Pisum sativum HOM05D002054 ORTHO05D005362 9.4e-15 85.5 256 30.9
BraA03t09549Z Brassica rapa HOM05D002054 ORTHO05D005362 1.6e-14 84.7 256 30.5
Phvul.007G247300 Phaseolus vulgaris HOM05D002054 ORTHO05D005362 1.6e-14 84.7 302 29.5
CANSAT56G0864 Cannabis sativa HOM05D002054 ORTHO05D005362 2.1e-14 84.3 302 31.5
ECA232G0254 Erigeron canadensis HOM05D002054 ORTHO05D005362 2.7e-14 84.0 154 40.9
Lsat_1_v5_gn_2_105021 Lactuca sativa HOM05D002054 ORTHO05D005362 2.7e-14 84.0 327 28.1
TPR.G2536 Trifolium pratense HOM05D002054 ORTHO05D005362 3.6e-14 83.6 246 30.9
BraA02t04821Z Brassica rapa HOM05D002054 ORTHO05D005362 4.7e-14 83.2 280 30.7
Sc20g0001250 Simmondsia chinensis HOM05D002054 ORTHO05D005362 4.7e-14 83.2 309 30.1
Cpa.g.sc19.5 Carica papaya HOM05D002054 ORTHO05D005362 1.4e-13 81.6 319 27.3
BcaC03g12936 Brassica carinata HOM05D002054 ORTHO05D005362 1.8e-13 81.3 282 29.4
CiPaw.13G037600 Carya illinoinensis HOM05D002054 ORTHO05D005362 2.3e-13 80.9 240 33.8
unitig_62.g23950 Utricularia gibba HOM05D002054 ORTHO05D005362 2.3e-13 80.9 200 29.5
CARHR208630 Cardamine hirsuta HOM05D002054 ORTHO05D005362 3.0e-13 80.5 283 31.1
QL04p043028 Quercus lobata HOM05D002054 ORTHO05D005362 3.0e-13 80.5 314 28.3
THA.LOC104823188 Tarenaya hassleriana HOM05D002054 ORTHO05D005362 3.0e-13 80.5 264 34.5
MELO3C019890.2 Cucumis melo HOM05D002054 ORTHO05D005362 4.0e-13 80.1 328 29.6
Nn1g08881 Nelumbo nucifera HOM05D002054 ORTHO05D005362 4.0e-13 80.1 317 27.4
Nn1g08893 Nelumbo nucifera HOM05D002054 ORTHO05D005362 4.0e-13 80.1 317 27.4
Thhalv10012741m.g Eutrema salsugineum HOM05D002054 ORTHO05D005362 5.2e-13 79.7 284 30.3
Sed0015776 Sechium edule HOM05D002054 ORTHO05D005362 6.8e-13 79.3 357 28.0
Hund06770 Selenicereus undatus HOM05D002054 ORTHO05D005362 6.8e-13 79.3 291 29.6
C02p02010 Brassica napus HOM05D002054 ORTHO05D005362 8.8e-13 79.0 282 29.1
CsaV3_6G004140 Cucumis sativus L. HOM05D002054 ORTHO05D005362 1.5e-12 78.2 330 30.6
Glyma.10G112500 Glycine max HOM05D002054 ORTHO05D005362 2.0e-12 77.8 252 27.8
PSO339G6409 Papaver somniferum HOM05D002054 ORTHO05D005362 2.6e-12 77.4 323 26.9
Psat6g177320 Pisum sativum HOM05D002054 ORTHO05D005362 2.6e-12 77.4 245 30.6
Ah.04g163740 Amaranthus hybridus HOM05D002054 ORTHO05D005362 3.4e-12 77.0 277 27.1
BolC2t06158H Brassica oleracea HOM05D002054 ORTHO05D005362 3.4e-12 77.0 282 29.1
CDE11G1163 Ceratophyllum demersum HOM05D002054 ORTHO05D005362 5.7e-12 76.3 304 26.6
Sp6g38140 Schrenkiella parvula HOM05D002054 ORTHO05D005362 7.5e-12 75.9 283 26.9
PSO384G3198 Papaver somniferum HOM05D002054 ORTHO05D005362 9.8e-12 75.5 322 27.6
Sed0012473 Sechium edule HOM05D002054 ORTHO05D005362 2.2e-11 74.3 331 29.6
HanXRQChr07g0194201 Helianthus annuus HOM05D002054 ORTHO05D005362 2.8e-11 73.9 273 30.0
Lalb_Chr02g0151461 Lupinus albus HOM05D002054 ORTHO05D005362 3.7e-11 73.6 228 33.8
PSO250G0011 Papaver somniferum HOM05D002054 ORTHO05D005362 4.8e-11 73.2 320 25.3
Medtr1g050512 Medicago truncatula HOM05D002054 ORTHO05D005362 6.3e-11 72.8 284 29.2
PSO384G0258 Papaver somniferum HOM05D002054 ORTHO05D005362 6.3e-11 72.8 322 27.3
Glyma.02G160100 Glycine max HOM05D002054 ORTHO05D005362 1.4e-10 71.6 247 30.8
HanXRQChr11g0321261 Helianthus annuus HOM05D002054 ORTHO05D005362 1.4e-10 71.6 158 37.3
vmacro07231 Vaccinium macrocarpon HOM05D002054 ORTHO05D005362 1.8e-10 71.2 213 29.6
CDE02G1934 Ceratophyllum demersum HOM05D002054 ORTHO05D005362 2.3e-08 64.3 270 24.4
PSO384G3608 Papaver somniferum HOM05D002054 ORTHO05D005362 2.3e-08 64.3 310 26.1
Aqoxy4G02845 Aquilegia oxysepala HOM05D002054 ORTHO05D005362 2.5e-07 60.8 100 33.0
Lsat_1_v5_gn_0_7461 Lactuca sativa HOM05D002054 ORTHO05D005362 3.3e-07 60.5 156 35.3
HanXRQChr05g0146881 Helianthus annuus HOM05D002054 ORTHO05D005362 9.5e-07 58.9 138 34.1


User provided reference genes

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