Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 1.1e-104 383.6 239 100.0
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 5.0e-70 268.5 187 73.8
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 6.2e-68 261.5 183 74.3
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 3.1e-67 259.2 190 71.6
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 4.0e-67 258.8 190 72.1
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 4.0e-67 258.8 191 72.8
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 5.2e-67 258.5 190 71.6
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 6.8e-67 258.1 191 69.1
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 8.9e-67 257.7 183 72.7
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 1.5e-66 256.9 179 73.7
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 3.4e-66 255.8 190 70.0
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 1.3e-65 253.8 178 73.6
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 1.7e-65 253.4 180 70.6
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 2.9e-65 252.7 180 72.2
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 2.9e-65 252.7 172 75.6
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 2.9e-65 252.7 180 71.1
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 3.7e-65 252.3 150 80.7
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 3.7e-65 252.3 149 81.2
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 3.7e-65 252.3 171 75.4
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 4.9e-65 251.9 192 68.2
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 6.4e-65 251.5 171 74.3
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 8.3e-65 251.1 210 72.9
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 8.3e-65 251.1 153 81.0
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 1.1e-64 250.8 193 66.8
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 1.4e-64 250.4 178 71.9
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 1.9e-64 250.0 184 70.7
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 5.4e-64 248.4 189 68.8
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 9.2e-64 247.7 183 70.5
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 9.2e-64 247.7 183 69.9
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.0e-63 246.5 145 80.7
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 3.5e-63 245.7 175 72.0
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 3.5e-63 245.7 187 67.4
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 4.6e-63 245.4 176 71.0
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 4.6e-63 245.4 181 68.5
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 6.0e-63 245.0 188 66.5
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 6.0e-63 245.0 207 71.5
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 6.0e-63 245.0 207 71.5
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 1.0e-62 244.2 151 80.1
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 1.0e-62 244.2 134 86.6
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 1.3e-62 243.8 181 70.2
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 1.7e-62 243.4 170 73.5
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 1.7e-62 243.4 187 66.3
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 1.7e-62 243.4 184 67.4
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 1.7e-62 243.4 188 64.4
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 1.7e-62 243.4 173 71.1
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 2.3e-62 243.0 172 70.9
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 3.0e-62 242.7 186 67.2
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 3.0e-62 242.7 178 69.7
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 6.6e-62 241.5 192 65.6
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 6.6e-62 241.5 192 65.6
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 8.6e-62 241.1 179 68.7
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 8.6e-62 241.1 173 71.1
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 1.1e-61 240.7 146 80.1
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 1.1e-61 240.7 146 78.8
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 1.9e-61 240.0 184 67.4
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 7.3e-61 238.0 181 68.5
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 9.5e-61 237.7 183 67.2
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 1.6e-60 236.9 182 66.5
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 2.1e-60 236.5 146 79.5
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 3.6e-60 235.7 159 71.1
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 3.6e-60 235.7 175 72.6
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 3.6e-60 235.7 180 68.3
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 6.2e-60 235.0 181 66.9
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 8.1e-60 234.6 167 72.5
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 1.4e-59 233.8 188 64.4
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 1.4e-59 233.8 188 64.4
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 1.4e-59 233.8 190 64.7
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 2.3e-59 233.0 188 64.4
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 2.3e-59 233.0 178 68.5
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 3.1e-59 232.6 189 65.1
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 3.1e-59 232.6 189 65.1
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 5.2e-59 231.9 188 64.4
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 6.8e-59 231.5 132 83.3
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 8.9e-59 231.1 188 62.8
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 1.2e-58 230.7 170 67.1
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 1.5e-58 230.3 192 65.6
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 2.0e-58 229.9 188 64.4
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 2.0e-58 229.9 188 64.4
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 3.4e-58 229.2 166 71.7
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 7.5e-58 228.0 135 80.0
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 1.7e-57 226.9 138 76.8
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 2.9e-57 226.1 175 68.6
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 3.7e-57 225.7 179 66.5
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 6.4e-57 224.9 134 80.6
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 9.2e-56 221.1 189 63.5
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 1.6e-55 220.3 185 61.6
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 1.3e-54 217.2 136 76.5
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 3.9e-54 215.7 240 50.0
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 4.0e-51 205.7 133 73.7
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 4.3e-45 185.7 192 54.2
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 9.6e-45 184.5 171 56.7
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 8.1e-44 181.4 181 56.4
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 1.1e-43 181.0 152 55.9
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 4.4e-42 175.6 184 53.8
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 8.4e-41 171.4 91 89.0
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 3.9e-38 162.5 121 71.1
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 6.6e-38 161.8 150 62.0
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 1.5e-34 150.6 178 50.0
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 1.5e-34 150.6 140 58.6
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 2.6e-34 149.8 195 49.2
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 3.2e-32 142.9 128 69.5
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 3.2e-32 142.9 128 69.5
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 6.2e-28 128.6 131 53.4
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 2.6e-26 123.2 170 44.7
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 5.5e-24 115.5 109 57.8
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 6.0e-23 112.1 85 72.9
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 2.8e-20 103.2 65 81.5
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 3.4e-18 96.3 103 56.3
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 2.2e-17 93.6 108 46.3
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 6.7e-14 82.0 55 70.9
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 4.1e-11 72.8 37 94.6
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 6.5e-09 65.5 31 83.9
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 5.5e-08 62.4 31 77.4
AagrBONN_evm.TU.Sc2ySwM_228.2727 Anthoceros agrestis HOM05D006601 ORTHO05D008281 1.6e-07 60.8 58 51.7
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 8.8e-06 55.1 120 40.0


User provided reference genes

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