Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 1.4e-207 726.1 372 100.0
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.6e-160 569.7 371 82.5
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 3.7e-160 568.5 371 81.7
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 2.1e-155 552.7 363 81.0
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 1.5e-153 546.6 354 79.9
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.6e-152 543.1 339 81.4
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 8.2e-152 540.8 343 80.8
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 9.0e-151 537.3 336 81.8
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 2.0e-150 536.2 336 81.5
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 2.6e-150 535.8 336 81.5
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 7.7e-150 534.3 353 79.3
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.3e-149 533.5 338 81.4
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 2.9e-149 532.3 363 76.6
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 1.9e-148 529.6 361 77.3
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 5.5e-148 528.1 353 78.8
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 1.2e-147 526.9 357 77.3
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.6e-147 526.6 373 75.6
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 2.1e-147 526.2 373 75.3
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 3.6e-147 525.4 349 78.8
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 3.6e-147 525.4 334 80.8
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 6.1e-147 524.6 377 74.5
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 5.7e-145 518.1 349 77.9
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 7.4e-145 517.7 335 80.0
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 1.7e-144 516.5 338 81.7
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 2.2e-144 516.2 367 76.0
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.8e-144 515.8 342 78.7
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 2.8e-144 515.8 362 74.3
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 3.7e-144 515.4 348 77.3
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 3.7e-144 515.4 378 74.1
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 3.7e-144 515.4 337 79.5
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 3.7e-144 515.4 373 74.3
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 8.2e-144 514.2 367 73.6
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 1.8e-143 513.1 341 78.9
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 2.4e-143 512.7 367 74.7
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 2.4e-143 512.7 363 73.8
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 3.1e-143 512.3 371 74.9
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 4.1e-143 511.9 377 75.3
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.1e-143 511.9 367 74.7
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 6.9e-143 511.1 338 78.4
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.2e-142 510.4 350 78.3
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 1.5e-142 510.0 349 76.5
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 2.0e-142 509.6 343 78.1
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 2.6e-142 509.2 370 73.2
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 2.6e-142 509.2 356 77.2
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 3.4e-142 508.8 376 73.7
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 5.9e-142 508.1 380 71.6
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 7.7e-142 507.7 330 78.8
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 2.9e-141 505.8 367 74.7
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 6.5e-141 504.6 398 69.1
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 1.1e-140 503.8 369 73.2
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 2.5e-140 502.7 385 72.7
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 2.5e-140 502.7 366 75.1
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 2.5e-140 502.7 363 73.0
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 4.2e-140 501.9 329 77.8
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 7.2e-140 501.1 342 77.8
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 9.4e-140 500.7 357 75.9
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 9.4e-140 500.7 357 75.9
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 1.2e-139 500.4 366 74.0
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 1.6e-139 500.0 368 74.2
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 1.6e-139 500.0 381 73.8
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 2.1e-139 499.6 368 74.2
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 2.7e-139 499.2 374 73.8
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 3.6e-139 498.8 344 77.3
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 4.7e-139 498.4 374 73.0
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 4.7e-139 498.4 374 73.0
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 4.7e-139 498.4 367 73.8
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 4.7e-139 498.4 373 73.5
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 7.9e-139 497.7 336 77.4
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 2.3e-138 496.1 345 77.1
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 2.3e-138 496.1 347 75.2
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 3.0e-138 495.7 372 72.6
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 8.8e-138 494.2 365 73.7
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 2.2e-136 489.6 357 73.7
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 3.7e-136 488.8 356 75.0
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 1.1e-135 487.3 368 71.7
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 7.0e-135 484.6 351 72.9
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 9.1e-135 484.2 363 71.3
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 1.6e-134 483.4 353 73.4
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 3.5e-134 482.3 327 74.6
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 7.7e-134 481.1 380 71.3
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 3.8e-133 478.8 367 71.4
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 8.5e-133 477.6 376 70.2
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 4.2e-132 475.3 364 72.3
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 6.1e-131 471.5 369 70.2
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 5.2e-130 468.4 370 68.4
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 5.2e-130 468.4 369 67.2
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 1.5e-129 466.8 325 76.6
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 1.5e-129 466.8 378 69.0
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 2.6e-129 466.1 278 86.3
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 3.3e-129 465.7 335 73.4
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 5.7e-129 464.9 327 74.3
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 1.7e-128 463.4 351 69.5
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.4e-127 460.3 330 71.8
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 4.1e-127 458.8 393 64.6
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 3.2e-124 449.1 310 76.5
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 5.5e-124 448.4 324 75.3
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 1.2e-123 447.2 318 75.8
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.7e-123 445.3 324 75.0
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 3.7e-120 435.6 285 80.0
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 1.4e-119 433.7 375 65.1
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.4e-114 417.2 382 61.8
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 2.8e-112 409.5 367 64.9
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 2.8e-112 409.5 282 75.2
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 1.8e-111 406.8 291 70.1
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 5.9e-110 401.7 293 69.3
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 3.3e-108 396.0 326 64.1
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 7.3e-108 394.8 233 85.4
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 6.4e-104 381.7 285 66.7
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 4.1e-95 352.4 293 64.2
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 2.8e-91 339.7 291 65.6
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 5.2e-90 335.5 208 81.2
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 9.5e-84 314.7 256 60.9
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 1.2e-81 307.8 283 57.2
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.9e-80 302.4 237 69.2
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 9.2e-79 298.1 254 59.4
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 1.2e-78 297.7 279 60.2
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 4.7e-75 285.8 218 71.1
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 4.6e-70 269.2 206 71.4
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 2.0e-65 253.8 250 58.0
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 4.6e-62 242.7 156 80.8
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 2.3e-53 213.8 167 70.1
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 5.1e-53 212.6 165 70.9
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 1.1e-50 204.9 206 56.3
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 6.9e-50 202.2 144 72.2
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 2.6e-49 200.3 153 67.3
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 1.0e-48 198.4 119 84.0
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 4.2e-47 193.0 114 85.1
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 3.5e-46 189.9 137 74.5
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 7.4e-36 155.6 124 65.3
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 2.2e-32 144.1 248 36.3
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 1.5e-28 131.3 250 34.8
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 4.5e-25 119.8 158 46.2
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 1.9e-23 114.4 181 44.2
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 8.0e-22 109.0 241 30.7
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 3.0e-21 107.1 78 75.6
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 2.0e-20 104.4 164 36.6
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 2.2e-19 100.9 78 61.5
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.8e-19 99.8 73 67.1
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 2.4e-18 97.4 50 94.0
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 6.3e-11 72.8 102 47.1


User provided reference genes

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