Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 7.1e-74 280.4 133 100.0
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 4.1e-61 238.0 130 84.6
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 5.0e-59 231.1 130 80.0
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 2.5e-58 228.8 130 79.2
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 3.2e-58 228.4 130 79.2
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 4.2e-58 228.0 133 79.7
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 4.2e-58 228.0 130 80.8
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 7.2e-58 227.3 130 78.5
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 9.4e-58 226.9 129 78.3
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 1.2e-57 226.5 133 75.9
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 1.6e-57 226.1 133 77.4
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.6e-57 226.1 133 77.4
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 1.6e-57 226.1 133 77.4
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 2.7e-57 225.3 133 75.2
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 2.7e-57 225.3 133 76.7
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 2.7e-57 225.3 130 79.2
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 2.7e-57 225.3 129 78.3
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 3.6e-57 224.9 129 79.1
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 3.6e-57 224.9 130 78.5
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 3.6e-57 224.9 130 78.5
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 3.6e-57 224.9 130 76.9
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 3.6e-57 224.9 133 76.7
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 4.6e-57 224.6 133 78.9
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 6.1e-57 224.2 129 78.3
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 6.1e-57 224.2 130 79.2
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 7.9e-57 223.8 133 77.4
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 7.9e-57 223.8 133 76.7
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 1.0e-56 223.4 133 75.9
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 1.0e-56 223.4 130 77.7
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 2.3e-56 222.2 133 75.9
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 2.3e-56 222.2 130 76.9
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 2.3e-56 222.2 130 76.9
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 3.0e-56 221.9 129 77.5
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 3.9e-56 221.5 129 77.5
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 3.9e-56 221.5 131 75.6
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 5.1e-56 221.1 130 77.7
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 6.7e-56 220.7 133 75.2
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 6.7e-56 220.7 133 75.9
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 6.7e-56 220.7 130 75.4
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 8.8e-56 220.3 133 73.7
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 1.1e-55 219.9 129 76.0
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 1.5e-55 219.5 133 74.4
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 2.5e-55 218.8 130 75.4
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 3.3e-55 218.4 130 75.4
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 4.3e-55 218.0 130 77.7
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 4.3e-55 218.0 133 75.2
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 4.3e-55 218.0 130 74.6
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 9.7e-55 216.9 133 72.9
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 4.8e-54 214.5 131 75.6
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 6.3e-54 214.2 130 73.8
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 8.2e-54 213.8 133 73.7
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 1.1e-53 213.4 133 72.9
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 1.1e-53 213.4 132 74.2
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 1.1e-53 213.4 132 74.2
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 1.4e-53 213.0 129 74.4
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 2.4e-53 212.2 131 73.3
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 3.1e-53 211.8 133 75.9
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 4.1e-53 211.5 130 72.3
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 5.3e-53 211.1 135 71.9
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 5.3e-53 211.1 130 73.1
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 5.3e-53 211.1 133 72.9
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 6.9e-53 210.7 129 74.4
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 6.9e-53 210.7 133 72.9
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 1.2e-52 209.9 133 71.4
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 1.2e-52 209.9 133 71.4
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 2.0e-52 209.1 132 72.0
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 3.4e-52 208.4 130 72.3
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 5.9e-52 207.6 129 72.1
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 7.7e-52 207.2 132 71.2
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 1.7e-51 206.1 132 70.5
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 3.8e-51 204.9 133 70.7
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 6.5e-51 204.1 130 70.8
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.4e-50 203.0 130 70.8
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 2.5e-50 202.2 132 68.9
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 1.6e-49 199.5 173 57.8
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 3.6e-49 198.4 134 70.1
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 3.0e-48 195.3 131 63.4
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 3.0e-48 195.3 131 66.4
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 8.8e-48 193.7 132 68.9
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 3.3e-47 191.8 130 67.7
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 9.7e-47 190.3 130 66.9
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.8e-45 186.0 131 64.1
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 3.1e-45 185.3 132 62.1
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 1.3e-43 179.9 113 73.5
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 9.4e-42 173.7 224 43.8
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 3.6e-41 171.8 130 62.3
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 1.4e-40 169.9 131 60.3
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.8e-40 169.5 131 60.3
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 1.8e-40 169.5 131 60.3
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 1.8e-40 169.5 133 59.4
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 2.3e-40 169.1 133 59.4
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 3.9e-40 168.3 131 58.8
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 3.9e-40 168.3 131 58.8
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 3.9e-40 168.3 131 58.8
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 5.2e-40 167.9 131 58.0
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 5.2e-40 167.9 131 58.0
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 8.8e-40 167.2 131 59.5
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 5.7e-39 164.5 153 54.2
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 1.3e-38 163.3 131 58.0
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 2.2e-38 162.5 133 57.1
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 4.8e-38 161.4 131 60.3
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 1.4e-37 159.8 129 55.0
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 4.5e-36 154.8 129 51.9
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 8.5e-35 150.6 119 59.7
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 1.2e-33 146.7 132 52.3
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 1.4e-32 143.3 133 52.6
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 1.8e-32 142.9 129 51.2
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 1.8e-32 142.9 82 80.5
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 5.2e-32 141.4 85 75.3
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 8.8e-32 140.6 135 48.1
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 7.5e-31 137.5 102 56.9
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 7.5e-31 137.5 129 48.1
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 1.3e-30 136.7 129 48.8
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 4.5e-28 128.3 100 64.0
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 5.2e-24 114.8 75 70.7
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 7.5e-23 110.9 67 77.6
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 2.2e-22 109.4 116 44.8
MD01G1062200 Malus domestica HOM05D006442 ORTHO05D007980 5.4e-21 104.8 72 72.2
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 5.7e-15 84.7 55 61.8
MELO3C023952.2 Cucumis melo HOM05D002156 ORTHO05D002328 7.5e-15 84.3 48 75.0
CsaV3_3G032380 Cucumis sativus L. HOM05D002156 ORTHO05D002328 9.8e-15 84.0 48 75.0
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 1.4e-13 80.1 124 36.3
AL8G12830 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.3e-11 73.6 53 62.3
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 1.9e-10 69.7 135 33.3
MD00G1052400 Malus domestica HOM05D006442 ORTHO05D007980 1.9e-10 69.7 43 72.1
AL5G40550 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 5.6e-10 68.2 47 63.8


User provided reference genes

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