Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006254 Daucus carota HOM05D004019 ORTHO05D005136 3.0e-151 538.5 272 100.0
Dinv30236 Davidia involucrata HOM05D004019 ORTHO05D005136 9.4e-73 277.7 300 51.0
Dinv14207 Davidia involucrata HOM05D004019 ORTHO05D005136 1.6e-72 276.9 301 53.2
Peaxi162Scf00105g00812 Petunia axillaris HOM05D004019 ORTHO05D005136 3.0e-71 272.7 277 51.6
Nitab4.5_0002393g0030 Nicotiana tabacum HOM05D004019 ORTHO05D005136 5.7e-70 268.5 290 49.0
vmacro11102 Vaccinium macrocarpon HOM05D004019 ORTHO05D005136 1.7e-69 266.9 281 50.9
MSTRG.25887 Avicennia marina HOM05D004019 ORTHO05D005136 1.4e-68 263.8 281 52.7
Nitab4.5_0000250g0110 Nicotiana tabacum HOM05D004019 ORTHO05D005136 1.8e-68 263.5 293 48.1
SGA_v2.0_scaffold280G46835 Striga asiatica HOM05D004019 ORTHO05D005136 4.1e-68 262.3 285 53.0
Migut.A00257 Erythranthe guttata HOM05D004019 ORTHO05D005136 5.4e-68 261.9 284 50.4
FvH4_2g30330 Fragaria vesca HOM05D004019 ORTHO05D005136 5.4e-68 261.9 299 50.2
RcHm_v2.0_Chr6g0312581 Rosa chinensis HOM05D004019 ORTHO05D005136 1.2e-67 260.8 299 49.8
Cc08_g08730 Coffea canephora HOM05D000021 ORTHO05D000010 1.6e-67 260.4 285 49.8
HanXRQChr17g0539391 Helianthus annuus HOM05D004019 ORTHO05D005136 1.6e-67 260.4 321 47.4
FAN24G2881 Fragaria x ananassa HOM05D004019 ORTHO05D005136 2.0e-67 260.0 296 50.0
FAN20G0521 Fragaria x ananassa HOM05D004019 ORTHO05D005136 3.5e-67 259.2 300 49.3
Sopen08g021930 Solanum pennellii HOM05D004019 ORTHO05D005136 3.5e-67 259.2 288 48.6
Actinidia13300 Actinidia chinensis HOM05D004019 ORTHO05D005136 1.3e-66 257.3 284 50.4
Solyc08g068040.3 Solanum lycopersicum HOM05D004019 ORTHO05D005136 1.3e-66 257.3 288 49.7
CSS0034867 Camellia sinensis var. sinensis HOM05D004019 ORTHO05D005136 2.9e-66 256.1 306 49.0
COL.COLO4_18737 Corchorus olitorius HOM05D004019 ORTHO05D005136 1.9e-65 253.4 309 46.3
ECA246G1280 Erigeron canadensis HOM05D004019 ORTHO05D005136 1.2e-64 250.8 329 45.3
Cc00_g31360 Coffea canephora HOM05D004019 ORTHO05D005136 3.6e-64 249.2 301 46.8
Thecc.09G037700 Theobroma cacao HOM05D004019 ORTHO05D005136 8.0e-64 248.1 309 45.6
Rhsim02G0185100 Rhododendron simsii HOM05D004019 ORTHO05D005136 4.0e-63 245.7 284 50.0
Gorai.009G053000 Gossypium raimondii HOM05D004019 ORTHO05D005136 1.5e-62 243.8 310 45.2
Gohir.A05G049400 Gossypium hirsutum HOM05D004019 ORTHO05D005136 4.4e-62 242.3 308 45.5
Prupe.1G464500 Prunus persica HOM05D004019 ORTHO05D005136 1.3e-61 240.7 314 45.9
Sabra06G0191800 Salix brachista HOM05D004019 ORTHO05D005136 1.7e-61 240.4 318 46.2
Atru.chr7.2305 Acer truncatum HOM05D004019 ORTHO05D005136 6.4e-61 238.4 308 45.1
Lsat_1_v5_gn_3_27801 Lactuca sativa HOM05D004019 ORTHO05D005136 1.1e-60 237.7 346 42.5
TWI63G0705 Tripterygium wilfordii HOM05D004019 ORTHO05D005136 1.8e-60 236.9 316 43.4
MD15G1113500 Malus domestica HOM05D004019 ORTHO05D005136 1.2e-59 234.2 314 45.2
Potri.006G244900 Populus trichocarpa HOM05D004019 ORTHO05D005136 1.2e-59 234.2 315 44.4
Haze_21656 Corylus avellana HOM05D004019 ORTHO05D005136 2.0e-59 233.4 310 45.2
Sc09g0008920 Simmondsia chinensis HOM05D004019 ORTHO05D005136 1.0e-58 231.1 282 48.2
Ciclev10007225m.g Citrus clementina HOM05D004019 ORTHO05D005136 1.3e-58 230.7 301 45.5
Lj1g0020850 Lotus japonicus HOM05D004019 ORTHO05D005136 1.3e-58 230.7 279 48.0
CiPaw.07G216600 Carya illinoinensis HOM05D004019 ORTHO05D005136 3.0e-58 229.6 309 45.0
QL12p030952 Quercus lobata HOM05D004019 ORTHO05D005136 1.1e-57 227.6 300 45.3
GSVIVG01035749001 Vitis vinifera HOM05D004019 ORTHO05D005136 1.1e-57 227.6 283 44.9
THA.LOC104803772 Tarenaya hassleriana HOM05D004019 ORTHO05D005136 1.5e-57 227.3 308 43.8
Cpa.g.sc205.16 Carica papaya HOM05D004019 ORTHO05D005136 7.3e-57 224.9 315 42.9
MBI03_g19627_MAGBIO Magnolia biondii HOM05D004019 ORTHO05D005136 1.6e-56 223.8 307 43.3
Sed0026885 Sechium edule HOM05D004019 ORTHO05D005136 6.2e-56 221.9 310 42.9
Glyma.06G074700 Glycine max HOM05D004019 ORTHO05D005136 8.0e-56 221.5 277 48.7
Eucgr.C01572 Eucalyptus grandis HOM05D004019 ORTHO05D005136 3.1e-55 219.5 306 44.1
Carub.0004s0550 Capsella rubella HOM05D004019 ORTHO05D005136 4.0e-55 219.2 287 45.3
TAR624G1332 Trochodendron aralioides HOM05D004019 ORTHO05D005136 5.2e-55 218.8 299 43.1
Nn8g39221 Nelumbo nucifera HOM05D004019 ORTHO05D005136 1.2e-54 217.6 298 43.0
Aa31LG5G9950 Aethionema arabicum HOM05D004019 ORTHO05D005136 3.4e-54 216.1 303 42.2
AT2G25730 Arabidopsis thaliana HOM05D004019 ORTHO05D005136 4.4e-54 215.7 285 45.3
CARHR115530 Cardamine hirsuta HOM05D004019 ORTHO05D005136 5.8e-54 215.3 283 45.9
AL4G17350 Arabidopsis lyrata HOM05D004019 ORTHO05D005136 1.7e-53 213.8 285 44.6
CsaV3_3G046830 Cucumis sativus L. HOM05D004019 ORTHO05D005136 1.7e-53 213.8 314 41.1
Lalb_Chr11g0064021 Lupinus albus HOM05D004019 ORTHO05D005136 1.7e-53 213.8 286 44.8
EL10Ac2g02527 Beta vulgaris HOM05D004019 ORTHO05D005136 3.7e-53 212.6 288 44.8
ClCG05G017320 Citrullus lanatus HOM05D004019 ORTHO05D005136 3.7e-53 212.6 318 42.1
unitig_747.g21873 Utricularia gibba HOM05D004019 ORTHO05D005136 3.7e-53 212.6 287 43.9
CANSAT25G1365 Cannabis sativa HOM05D004019 ORTHO05D005136 8.3e-53 211.5 314 41.7
Psat5g025600 Pisum sativum HOM05D004019 ORTHO05D005136 8.3e-53 211.5 279 46.6
CANSAT56G4370 Cannabis sativa HOM05D004019 ORTHO05D005136 1.1e-52 211.1 319 41.4
Ah.12g060350 Amaranthus hybridus HOM05D004019 ORTHO05D005136 1.4e-52 210.7 284 44.0
Sp4g05330 Schrenkiella parvula HOM05D004019 ORTHO05D005136 4.1e-52 209.1 288 43.1
arahy.Tifrunner.gnm1.ann1.P4KF2E Arachis hypogaea HOM05D004019 ORTHO05D005136 7.0e-52 208.4 301 44.5
AUR62032391 Chenopodium quinoa HOM05D004019 ORTHO05D005136 9.2e-52 208.0 286 45.1
PGR031G1071 Punica granatum HOM05D004019 ORTHO05D005136 9.2e-52 208.0 287 43.6
arahy.Tifrunner.gnm1.ann1.WYF2AC Arachis hypogaea HOM05D004019 ORTHO05D005136 1.6e-51 207.2 301 44.5
AUR62024824 Chenopodium quinoa HOM05D004019 ORTHO05D005136 3.5e-51 206.1 285 43.9
TPR.G12417 Trifolium pratense HOM05D004019 ORTHO05D005136 3.5e-51 206.1 278 44.2
Aqoxy7G01749 Aquilegia oxysepala HOM05D004019 ORTHO05D005136 1.0e-50 204.5 300 39.7
PSO063G5962 Papaver somniferum HOM05D004019 ORTHO05D005136 1.3e-50 204.1 319 39.8
Ca_15687_v3 Cicer arietinum L. HOM05D004019 ORTHO05D005136 1.1e-49 201.1 283 43.5
PSO782G0289 Papaver somniferum HOM05D004019 ORTHO05D005136 1.5e-49 200.7 320 39.4
C03p32450 Brassica napus HOM05D004019 ORTHO05D005136 1.9e-49 200.3 278 44.2
BolC3t15586H Brassica oleracea HOM05D004019 ORTHO05D005136 3.3e-49 199.5 278 44.6
A03p27040 Brassica napus HOM05D004019 ORTHO05D005136 4.4e-46 189.1 275 42.5
BraA03t11915Z Brassica rapa HOM05D004019 ORTHO05D005136 4.4e-46 189.1 276 42.4
CDE10G0881 Ceratophyllum demersum HOM05D004019 ORTHO05D005136 9.8e-46 188.0 273 39.9
SHI11647 Sapria himalayana HOM05D004019 ORTHO05D005136 7.1e-44 181.8 288 39.6
Medtr3g108360 Medicago truncatula HOM05D004019 ORTHO05D005136 1.6e-43 180.6 281 41.3
HPP92_006442 Vanilla planifolia HOM05D004019 ORTHO05D005136 1.9e-41 173.7 282 38.3
Zm00001eb161040 Zea mays HOM05D004019 ORTHO05D005136 1.0e-34 151.4 271 36.9
ATR1120G055 Amborella trichopoda HOM05D004019 ORTHO05D005136 1.1e-33 147.9 313 32.6
Cc08_g08140 Coffea canephora HOM05D004019 ORTHO05D005136 2.6e-22 110.2 118 44.1
SalBow4G2655 Salvia bowleyana HOM05D004019 ORTHO05D005136 8.7e-18 95.1 99 45.5
SMO172G0089 Selaginella moellendorffii HOM05D004019 ORTHO05D005136 1.3e-16 91.3 286 26.9
Mapoly0049s0060 Marchantia polymorpha HOM05D004019 ORTHO05D005136 6.2e-16 89.0 78 57.7
Pp3c19_2530 Physcomitrium patens HOM05D004019 ORTHO05D005136 1.2e-14 84.7 100 44.0
Cc00_g28950 Coffea canephora HOM05D004019 ORTHO05D005136 5.8e-14 82.4 60 68.3
Cc08_g08790 Coffea canephora HOM05D004019 ORTHO05D005136 2.2e-13 80.5 60 65.0
FvH4_2g30421 Fragaria vesca HOM05D004019 ORTHO05D035788 5.5e-12 75.9 52 63.5
AagrBONN_evm.TU.Sc2ySwM_340.130 Anthoceros agrestis HOM05D004019 ORTHO05D005136 1.4e-07 61.2 125 30.4


User provided reference genes

Program Settings