Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006239 Daucus carota HOM05D006995 ORTHO05D008870 1.2e-50 203.0 108 100.0
Psat5g116320 Pisum sativum HOM05D006995 ORTHO05D008870 1.5e-13 79.7 100 52.0
VMungo1309G2685 Vigna mungo HOM05D006995 ORTHO05D008870 2.6e-13 79.0 100 54.0
Peaxi162Scf00089g01427 Petunia axillaris HOM05D006995 ORTHO05D008870 3.3e-13 78.6 109 45.0
MSTRG.23164 Avicennia marina HOM05D006995 ORTHO05D008870 5.7e-13 77.8 80 62.5
Lj9C443G5 Lonicera japonica HOM05D006995 ORTHO05D008870 9.7e-13 77.0 100 54.0
TAR629G0625 Trochodendron aralioides HOM05D006995 ORTHO05D008870 3.7e-12 75.1 100 54.0
Cc04_g11640 Coffea canephora HOM05D006995 ORTHO05D008870 4.8e-12 74.7 80 60.0
Prupe.5G166100 Prunus persica HOM05D006995 ORTHO05D008870 4.8e-12 74.7 81 53.1
arahy.Tifrunner.gnm1.ann1.W5ECLN Arachis hypogaea HOM05D006995 ORTHO05D008870 6.3e-12 74.3 80 61.2
arahy.Tifrunner.gnm1.ann1.X0DT51 Arachis hypogaea HOM05D006995 ORTHO05D008870 6.3e-12 74.3 80 61.2
TAR629G2225 Trochodendron aralioides HOM05D000001 ORTHO05D414751 6.3e-12 74.3 81 63.0
CSS0043708 Camellia sinensis var. sinensis HOM05D006995 ORTHO05D008870 8.2e-12 73.9 80 51.2
Manes.14G061000 Manihot esculenta HOM05D006995 ORTHO05D008870 1.4e-11 73.2 74 67.6
MSTRG.11491 Avicennia marina HOM05D006995 ORTHO05D008870 1.8e-11 72.8 80 62.5
SalBow5G1368 Salvia bowleyana HOM05D006995 ORTHO05D008870 1.8e-11 72.8 80 62.5
SalBow5G3606 Salvia bowleyana HOM05D006995 ORTHO05D008870 1.8e-11 72.8 80 62.5
Migut.O00152 Erythranthe guttata HOM05D006995 ORTHO05D008870 2.4e-11 72.4 80 50.0
Dinv20602 Davidia involucrata HOM05D006995 ORTHO05D008870 3.1e-11 72.0 54 64.8
Oeu008873.1 Olea europaea HOM05D006995 ORTHO05D008870 3.1e-11 72.0 80 61.2
Ca_22795_v3 Cicer arietinum L. HOM05D001863 ORTHO05D001962 5.3e-11 71.2 78 50.0
Hma1.2p1_0046F.1_g027080 Hydrangea macrophylla HOM05D006995 ORTHO05D008870 5.3e-11 71.2 80 61.2
MD14G1172000 Malus domestica HOM05D006995 ORTHO05D008870 7.0e-11 70.9 80 58.8
Phvul.009G174500 Phaseolus vulgaris HOM05D006995 ORTHO05D008870 7.0e-11 70.9 100 53.0
TWI23G0026 Tripterygium wilfordii HOM05D006995 ORTHO05D008870 7.0e-11 70.9 90 54.4
Potri.012G085100 Populus trichocarpa HOM05D006995 ORTHO05D008870 1.2e-10 70.1 100 50.0
Nn3g16705 Nelumbo nucifera HOM05D006995 ORTHO05D008870 2.0e-10 69.3 56 78.6
GSVIVG01007657001 Vitis vinifera HOM05D006995 ORTHO05D008870 2.0e-10 69.3 54 77.8
RcHm_v2.0_Chr7g0192611 Rosa chinensis HOM05D006995 ORTHO05D008870 3.5e-10 68.6 80 56.2
Ca_16134_v3 Cicer arietinum L. HOM05D006995 ORTHO05D008870 4.5e-10 68.2 100 51.0
Actinidia24594 Actinidia chinensis HOM05D006995 ORTHO05D008870 7.7e-10 67.4 80 53.8
Nn4g22611 Nelumbo nucifera HOM05D006995 ORTHO05D008870 7.7e-10 67.4 81 55.6
TPR.G22880 Trifolium pratense HOM05D006995 ORTHO05D008870 7.7e-10 67.4 52 76.9
FAN08G0020 Fragaria x ananassa HOM05D006995 ORTHO05D008870 1.0e-09 67.0 80 56.2
Glyma.04G187800 Glycine max HOM05D006995 ORTHO05D008870 1.0e-09 67.0 80 56.2
Sp2g26260 Schrenkiella parvula HOM05D006995 ORTHO05D008870 1.0e-09 67.0 80 47.5
TWI39G0505 Tripterygium wilfordii HOM05D006995 ORTHO05D008870 1.0e-09 67.0 80 61.2
FvH4_5g06250 Fragaria vesca HOM05D006995 ORTHO05D008870 1.3e-09 66.6 80 55.0
CiPaw.12G030600 Carya illinoinensis HOM05D006995 ORTHO05D008870 1.7e-09 66.2 69 56.5
MBI15_g24199_MAGBIO Magnolia biondii HOM05D006995 ORTHO05D008870 2.2e-09 65.9 51 82.4
FAN18G0637 Fragaria x ananassa HOM05D006995 ORTHO05D008870 2.9e-09 65.5 80 53.8
ATR0743G118 Amborella trichopoda HOM05D006995 ORTHO05D008870 6.5e-09 64.3 97 43.3
Glyma.06G177900 Glycine max HOM05D006995 ORTHO05D008870 1.1e-08 63.5 100 47.0
PGSC0003DMG400018185 Solanum tuberosum HOM05D006995 ORTHO05D008870 1.1e-08 63.5 100 50.0
Aa31LG1G18840 Aethionema arabicum HOM05D006995 ORTHO05D008870 1.5e-08 63.2 80 45.0
Nitab4.5_0001793g0100 Nicotiana tabacum HOM05D006995 ORTHO05D008870 1.5e-08 63.2 100 49.0
Nitab4.5_0003703g0070 Nicotiana tabacum HOM05D006995 ORTHO05D008870 1.5e-08 63.2 100 49.0
unitig_26.g8807 Utricularia gibba HOM05D006995 ORTHO05D008870 1.5e-08 63.2 80 43.8
Solyc03g112290.2 Solanum lycopersicum HOM05D006995 ORTHO05D008870 2.5e-08 62.4 100 49.0
Sopen03g031390 Solanum pennellii HOM05D006995 ORTHO05D008870 2.5e-08 62.4 100 49.0
CAN.G338.27 Capsicum annuum HOM05D006995 ORTHO05D008870 4.2e-08 61.6 100 49.0
QL10p006993 Quercus lobata HOM05D006995 ORTHO05D008870 9.4e-08 60.5 78 55.1
HanXRQChr04g0101331 Helianthus annuus HOM05D006995 ORTHO05D008870 1.2e-07 60.1 81 51.9
CiPaw.11G020900 Carya illinoinensis HOM05D006995 ORTHO05D008870 1.6e-07 59.7 80 57.5
Medtr3g077017 Medicago truncatula HOM05D006995 ORTHO05D008870 1.6e-07 59.7 80 56.2
vmacro16643 Vaccinium macrocarpon HOM05D006995 ORTHO05D008870 1.6e-07 59.7 53 73.6
Lj1g0014247 Lotus japonicus HOM05D006995 ORTHO05D008870 2.1e-07 59.3 80 48.8
Aqoxy5G03762 Aquilegia oxysepala HOM05D006995 ORTHO05D008870 2.7e-07 58.9 81 45.7
Lalb_Chr08g0236711 Lupinus albus HOM05D006995 ORTHO05D008870 4.7e-07 58.2 100 47.0
AL8G40200 Arabidopsis lyrata HOM05D006995 ORTHO05D008870 6.1e-07 57.8 80 51.2
ATR0824G277 Amborella trichopoda HOM05D006995 ORTHO05D008870 8.0e-07 57.4 69 47.8
Sc04g0001540 Simmondsia chinensis HOM05D006995 ORTHO05D008870 8.0e-07 57.4 64 62.5
Thhalv10023776m.g Eutrema salsugineum HOM05D006995 ORTHO05D008870 1.8e-06 56.2 80 47.5
Lsat_1_v5_gn_5_14241 Lactuca sativa HOM05D006995 ORTHO05D008870 1.8e-06 56.2 72 51.4
THA.LOC104798964 Tarenaya hassleriana HOM05D006995 ORTHO05D008870 2.3e-06 55.8 94 42.6
A06p29860 Brassica napus HOM05D006995 ORTHO05D008870 3.0e-06 55.5 82 50.0
BraA06t25934Z Brassica rapa HOM05D006995 ORTHO05D008870 3.0e-06 55.5 82 50.0
BcaB02g09725 Brassica carinata HOM05D006995 ORTHO05D008870 4.0e-06 55.1 81 50.6
CANSAT80G0726 Cannabis sativa HOM05D006995 ORTHO05D008870 4.0e-06 55.1 80 55.0
Hund02782 Selenicereus undatus HOM05D006995 ORTHO05D008870 4.0e-06 55.1 55 65.5
AT5G63135 Arabidopsis thaliana HOM05D006995 ORTHO05D008870 6.7e-06 54.3 80 52.5
PGR044G0957 Punica granatum HOM05D006995 ORTHO05D008870 6.7e-06 54.3 79 45.6
Sed0018383 Sechium edule HOM05D006995 ORTHO05D008870 8.8e-06 53.9 55 50.9


User provided reference genes

Program Settings