Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006168 Daucus carota HOM05D006357 ORTHO05D007925 3.5e-92 341.7 181 100.0
TAR633G1946 Trochodendron aralioides HOM05D006357 ORTHO05D007925 2.6e-58 229.2 177 61.0
Lsat_1_v5_gn_1_59200 Lactuca sativa HOM05D006357 ORTHO05D007925 4.8e-57 224.9 178 64.0
Cfa010003 Carpinus fangiana HOM05D006357 ORTHO05D007925 6.3e-57 224.6 178 62.4
Aqoxy2G01095 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 1.8e-56 223.0 178 61.2
CANSAT54G2809 Cannabis sativa HOM05D006357 ORTHO05D007925 5.3e-56 221.5 176 61.9
Prupe.6G132600 Prunus persica HOM05D006357 ORTHO05D007925 1.2e-55 220.3 176 61.9
Gohir.A08G005700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 2.0e-55 219.5 178 61.8
PGR119G0351 Punica granatum HOM05D006357 ORTHO05D007925 2.0e-55 219.5 179 63.7
VMungo1127G1055 Vigna mungo HOM05D006357 ORTHO05D007925 3.5e-55 218.8 176 60.2
A06p22010 Brassica napus HOM05D006357 ORTHO05D007925 4.5e-55 218.4 178 61.8
BraA06t25289Z Brassica rapa HOM05D006357 ORTHO05D007925 4.5e-55 218.4 178 61.8
Ciclev10029363m.g Citrus clementina HOM05D006357 ORTHO05D007925 5.9e-55 218.0 178 61.8
FvH4_3g25140 Fragaria vesca HOM05D006357 ORTHO05D007925 5.9e-55 218.0 176 62.5
Gohir.D08G016000 Gossypium hirsutum HOM05D006357 ORTHO05D007925 5.9e-55 218.0 178 61.2
Gorai.004G010300 Gossypium raimondii HOM05D006357 ORTHO05D007925 5.9e-55 218.0 178 61.2
HanXRQChr01g0024501 Helianthus annuus HOM05D006357 ORTHO05D007925 5.9e-55 218.0 176 62.5
Lj2P966T16 Lonicera japonica HOM05D006357 ORTHO05D007925 5.9e-55 218.0 178 62.4
Phvul.011G095000 Phaseolus vulgaris HOM05D006357 ORTHO05D007925 7.7e-55 217.6 176 60.8
Prupe.6G132700 Prunus persica HOM05D006357 ORTHO05D007925 7.7e-55 217.6 178 59.6
Rhsim01G0204700 Rhododendron simsii HOM05D006357 ORTHO05D007925 7.7e-55 217.6 177 60.5
Atru.chr3.3206 Acer truncatum HOM05D006357 ORTHO05D007925 1.0e-54 217.2 174 63.8
CiPaw.13G134700 Carya illinoinensis HOM05D006357 ORTHO05D007925 1.0e-54 217.2 176 61.4
Dinv22833 Davidia involucrata HOM05D006357 ORTHO05D007925 1.0e-54 217.2 178 57.9
FAN21G3578 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.0e-54 217.2 176 61.9
MD03G1147800 Malus domestica HOM05D006357 ORTHO05D007925 1.0e-54 217.2 178 60.1
RcHm_v2.0_Chr5g0046241 Rosa chinensis HOM05D006357 ORTHO05D007925 1.0e-54 217.2 178 58.4
Thecc.09G281200 Theobroma cacao HOM05D006357 ORTHO05D007925 1.0e-54 217.2 178 61.2
Glyma.11G182400 Glycine max HOM05D006357 ORTHO05D007925 1.3e-54 216.9 174 60.9
QL01p012073 Quercus lobata HOM05D006357 ORTHO05D007925 1.3e-54 216.9 176 61.9
PSO801G0234 Papaver somniferum HOM05D006357 ORTHO05D007925 2.2e-54 216.1 178 59.0
QL01p012091 Quercus lobata HOM05D006357 ORTHO05D007925 2.2e-54 216.1 176 61.9
Duzib150G0376 Durio zibethinus HOM05D006357 ORTHO05D007925 2.9e-54 215.7 176 61.4
Cc01_g08980 Coffea canephora HOM05D006357 ORTHO05D007925 5.0e-54 214.9 175 62.9
Thhalv10010749m.g Eutrema salsugineum HOM05D006357 ORTHO05D007925 5.0e-54 214.9 178 61.2
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla HOM05D006357 ORTHO05D007925 5.0e-54 214.9 181 58.0
Lj3g0017887 Lotus japonicus HOM05D006357 ORTHO05D007925 5.0e-54 214.9 174 61.5
MBI01_g14623_MAGBIO Magnolia biondii HOM05D006357 ORTHO05D007925 6.5e-54 214.5 179 59.8
THA.LOC104814785 Tarenaya hassleriana HOM05D006357 ORTHO05D007925 6.5e-54 214.5 176 62.5
PSO339G3266 Papaver somniferum HOM05D006357 ORTHO05D007925 1.1e-53 213.8 178 58.4
Atru.chr3.3208 Acer truncatum HOM05D006357 ORTHO05D007925 1.9e-53 213.0 178 60.7
CSS0003287 Camellia sinensis var. sinensis HOM05D006357 ORTHO05D007925 4.2e-53 211.8 176 59.7
MSTRG.12374 Avicennia marina HOM05D006357 ORTHO05D007925 5.5e-53 211.5 174 62.1
MELO3C014499.2 Cucumis melo HOM05D006357 ORTHO05D007925 5.5e-53 211.5 177 58.2
ClCG02G022220 Citrullus lanatus HOM05D006357 ORTHO05D007925 7.2e-53 211.1 177 58.2
SalBow3G2384 Salvia bowleyana HOM05D006357 ORTHO05D007925 7.2e-53 211.1 176 58.0
EL10Ac7g15835 Beta vulgaris HOM05D006357 ORTHO05D007925 9.4e-53 210.7 177 58.8
CARHR104480 Cardamine hirsuta HOM05D006357 ORTHO05D007925 1.2e-52 210.3 178 59.6
BcaB01g01165 Brassica carinata HOM05D006357 ORTHO05D007925 1.6e-52 209.9 178 60.1
Ca_19414_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 1.6e-52 209.9 176 58.0
Migut.N02483 Erythranthe guttata HOM05D006357 ORTHO05D007925 1.6e-52 209.9 175 58.9
Manes.11G162800 Manihot esculenta HOM05D006357 ORTHO05D007925 1.6e-52 209.9 178 56.2
Psat7g187640 Pisum sativum HOM05D006357 ORTHO05D007925 1.6e-52 209.9 180 57.2
Nn6g34850 Nelumbo nucifera HOM05D006357 ORTHO05D007925 2.1e-52 209.5 175 57.1
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea HOM05D006357 ORTHO05D007925 3.6e-52 208.8 177 59.9
Ca_26666_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 3.6e-52 208.8 176 57.4
Medtr4g052840 Medicago truncatula HOM05D006357 ORTHO05D007925 3.6e-52 208.8 178 57.9
Sp5g16810 Schrenkiella parvula HOM05D006357 ORTHO05D007925 3.6e-52 208.8 178 59.0
BcaC01g02047 Brassica carinata HOM05D006357 ORTHO05D007925 4.7e-52 208.4 178 59.0
C03p69190 Brassica napus HOM05D006357 ORTHO05D007925 4.7e-52 208.4 178 59.0
BolC3t19173H Brassica oleracea HOM05D006357 ORTHO05D007925 4.7e-52 208.4 178 59.0
Lalb_Chr01g0004891 Lupinus albus HOM05D006357 ORTHO05D007925 6.1e-52 208.0 176 56.8
TWI75G1708 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 6.1e-52 208.0 176 59.1
GSVIVG01036107001 Vitis vinifera HOM05D006357 ORTHO05D007925 6.1e-52 208.0 177 58.2
Nitab4.5_0005641g0010 Nicotiana tabacum HOM05D006357 ORTHO05D007925 8.0e-52 207.6 176 59.7
Carub.0005s1011 Capsella rubella HOM05D006357 ORTHO05D007925 1.0e-51 207.2 178 58.4
CsaV3_6G038350 Cucumis sativus L. HOM05D006357 ORTHO05D007925 1.0e-51 207.2 177 55.9
MD11G1166600 Malus domestica HOM05D006357 ORTHO05D007925 1.0e-51 207.2 179 58.1
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea HOM05D006357 ORTHO05D007925 1.8e-51 206.5 177 59.3
Solyc11g068550.1 Solanum lycopersicum HOM05D006357 ORTHO05D007925 1.8e-51 206.5 178 58.4
Sopen11g027270 Solanum pennellii HOM05D006357 ORTHO05D007925 1.8e-51 206.5 178 58.4
AT3G44380 Arabidopsis thaliana HOM05D006357 ORTHO05D007925 3.0e-51 205.7 178 59.0
Haze_23361 Corylus avellana HOM05D006357 ORTHO05D007925 3.0e-51 205.7 164 62.8
Gohir.D07G114400 Gossypium hirsutum HOM05D006357 ORTHO05D007925 3.0e-51 205.7 178 55.6
TPR.G17225 Trifolium pratense HOM05D006357 ORTHO05D007925 3.0e-51 205.7 180 56.1
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 4.0e-51 205.3 178 57.3
AL5G22540 Arabidopsis lyrata HOM05D006357 ORTHO05D007925 5.2e-51 204.9 178 57.9
Gorai.001G122700 Gossypium raimondii HOM05D006357 ORTHO05D007925 5.2e-51 204.9 178 55.6
Gohir.A07G110700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 8.8e-51 204.1 178 55.1
Nitab4.5_0006120g0030 Nicotiana tabacum HOM05D006357 ORTHO05D007925 8.8e-51 204.1 176 58.0
Sc06g0008780 Simmondsia chinensis HOM05D006357 ORTHO05D007925 1.2e-50 203.8 178 54.5
TWI79G0514 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 2.0e-50 203.0 176 56.8
Ah.08g215640 Amaranthus hybridus HOM05D006357 ORTHO05D007925 2.6e-50 202.6 177 58.8
Eucgr.J00502 Eucalyptus grandis HOM05D006357 ORTHO05D007925 7.5e-50 201.1 177 56.5
FvH4_3g25160 Fragaria vesca HOM05D006357 ORTHO05D007925 2.2e-49 199.5 173 57.8
FAN25G2095 Fragaria x ananassa HOM05D006357 ORTHO05D007925 3.7e-49 198.7 173 57.8
Sabra16G0125700 Salix brachista HOM05D006357 ORTHO05D007925 6.3e-49 198.0 179 55.3
Actinidia37077 Actinidia chinensis HOM05D006357 ORTHO05D007925 1.1e-48 197.2 179 54.7
Potri.001G218400 Populus trichocarpa HOM05D006357 ORTHO05D007925 1.1e-48 197.2 179 54.2
Aqoxy4G02740 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 1.8e-48 196.4 180 55.6
unitig_699.g19178 Utricularia gibba HOM05D006357 ORTHO05D007925 1.8e-48 196.4 176 56.2
SGA_v2.0_scaffold177G39425 Striga asiatica HOM05D006357 ORTHO05D007925 3.1e-48 195.7 177 54.8
Lalb_Chr03g0028161 Lupinus albus HOM05D006357 ORTHO05D007925 7.0e-48 194.5 174 54.6
FAN11G2870 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.2e-47 193.7 168 57.7
Sed0020794 Sechium edule HOM05D006357 ORTHO05D007925 1.3e-46 190.3 177 53.7
Sc21g0007020 Simmondsia chinensis HOM05D006357 ORTHO05D007925 6.6e-46 188.0 188 51.1
Dinv42541 Davidia involucrata HOM05D006357 ORTHO05D007925 3.3e-45 185.7 162 56.2
PGR102G0344 Punica granatum HOM05D006357 ORTHO05D007925 1.8e-43 179.9 174 49.4
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 9.8e-42 174.1 137 64.2
Ah.15g095880 Amaranthus hybridus HOM05D006357 ORTHO05D007925 4.1e-40 168.7 190 46.3
AUR62036192 Chenopodium quinoa HOM05D006357 ORTHO05D007925 1.6e-39 166.8 197 45.2
Nn6g34849 Nelumbo nucifera HOM05D006357 ORTHO05D007925 1.6e-39 166.8 174 48.3
AUR62009745 Chenopodium quinoa HOM05D006357 ORTHO05D007925 4.5e-39 165.2 198 44.9
PSO339G1489 Papaver somniferum HOM05D006357 ORTHO05D007925 1.9e-37 159.8 150 56.7
PSO384G0917 Papaver somniferum HOM05D006357 ORTHO05D007925 1.9e-37 159.8 152 55.9
AUR62036201 Chenopodium quinoa HOM05D006357 ORTHO05D007925 9.5e-37 157.5 147 53.7
Os08g0558300 Oryza sativa ssp. japonica HOM05D006357 ORTHO05D007925 1.5e-34 150.2 171 47.4
RcHm_v2.0_Chr5g0046191 Rosa chinensis HOM05D006357 ORTHO05D007925 9.8e-34 147.5 114 62.3
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis HOM05D006357 ORTHO05D007925 4.1e-32 142.1 169 44.4
Mapoly0079s0020 Marchantia polymorpha HOM05D006357 ORTHO05D007925 2.5e-29 132.9 178 40.4
PGSC0003DMG400026335 Solanum tuberosum HOM05D006357 ORTHO05D007925 6.2e-28 128.3 106 57.5
Cpa.g.sc195.8 Carica papaya HOM05D006357 ORTHO05D007925 2.3e-27 126.3 101 59.4
Pp3c21_10640 Physcomitrium patens HOM05D006357 ORTHO05D007925 6.8e-27 124.8 184 40.2
ATR0820G064 Amborella trichopoda HOM05D006357 ORTHO05D007925 2.0e-26 123.2 183 38.3
SMO347G0335 Selaginella moellendorffii HOM05D006357 ORTHO05D007925 2.6e-26 122.9 174 40.2
SEGI_40876 Sequoiadendron giganteum HOM05D006357 ORTHO05D007925 8.3e-25 117.9 159 40.3
Pp3c9_9450 Physcomitrium patens HOM05D006357 ORTHO05D007925 1.9e-24 116.7 158 38.0
Pp3c2_16750 Physcomitrium patens HOM05D006357 ORTHO05D007925 3.5e-23 112.5 164 38.4
Actinidia35469 Actinidia chinensis HOM05D006357 ORTHO05D007925 4.3e-21 105.5 90 56.7
ATR0820G202 Amborella trichopoda HOM05D006357 ORTHO05D007925 5.6e-21 105.1 130 43.1
AUR62036200 Chenopodium quinoa HOM05D006357 ORTHO05D007925 3.1e-19 99.4 90 52.2
AUR62044742 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.1e-15 86.7 79 54.4
ATR0820G128 Amborella trichopoda HOM05D006357 ORTHO05D007925 1.7e-14 83.6 90 47.8
Pp3c18_21320 Physcomitrium patens HOM05D003111 ORTHO05D003502 1.3e-06 57.4 115 31.3


User provided reference genes

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