Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 2.7e-49 198.4 102 100.0
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 5.7e-31 137.5 99 67.7
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 1.3e-30 136.3 97 74.2
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 1.3e-30 136.3 97 74.2
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 4.8e-30 134.4 91 75.8
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 6.3e-30 134.0 99 70.7
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 8.3e-30 133.7 99 65.7
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 1.8e-29 132.5 92 69.6
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 2.4e-29 132.1 92 71.7
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 3.1e-29 131.7 96 74.0
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 4.1e-29 131.3 92 71.7
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 5.4e-29 131.0 90 75.6
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 5.4e-29 131.0 99 66.7
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 1.2e-28 129.8 92 69.6
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 1.2e-28 129.8 92 70.7
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 1.6e-28 129.4 93 74.2
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 2.0e-28 129.0 99 68.7
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 2.7e-28 128.6 90 72.2
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 2.7e-28 128.6 92 72.8
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 3.5e-28 128.3 91 72.5
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 3.5e-28 128.3 92 70.7
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 4.5e-28 127.9 92 68.5
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 5.9e-28 127.5 88 72.7
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 5.9e-28 127.5 92 69.6
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 1.0e-27 126.7 92 67.4
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 1.0e-27 126.7 92 69.6
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 1.3e-27 126.3 93 73.1
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 1.3e-27 126.3 92 69.6
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 1.7e-27 125.9 94 69.1
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 2.3e-27 125.6 92 67.4
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 2.9e-27 125.2 92 69.6
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 3.8e-27 124.8 92 69.6
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 3.8e-27 124.8 95 67.4
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 5.0e-27 124.4 103 66.0
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 5.0e-27 124.4 92 70.7
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 5.0e-27 124.4 94 70.2
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 5.0e-27 124.4 90 70.0
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 6.5e-27 124.0 92 66.3
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 6.5e-27 124.0 91 68.1
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 6.5e-27 124.0 92 68.5
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 8.6e-27 123.6 94 64.9
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 8.6e-27 123.6 104 68.3
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 8.6e-27 123.6 91 70.3
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 1.1e-26 123.2 95 67.4
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 1.1e-26 123.2 92 67.4
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.5e-26 122.9 95 65.3
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 1.5e-26 122.9 109 62.4
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 1.9e-26 122.5 97 64.9
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 1.9e-26 122.5 91 68.1
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 2.5e-26 122.1 92 65.2
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 2.5e-26 122.1 95 66.3
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 2.5e-26 122.1 104 67.3
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 3.3e-26 121.7 92 66.3
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 3.3e-26 121.7 92 68.5
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 3.3e-26 121.7 92 66.3
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 5.5e-26 120.9 92 69.6
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 5.5e-26 120.9 88 64.8
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 7.2e-26 120.6 92 65.2
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 9.5e-26 120.2 92 65.2
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 3.6e-25 118.2 91 64.8
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 3.6e-25 118.2 91 64.8
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 4.7e-25 117.9 92 64.1
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 4.7e-25 117.9 91 65.9
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 8.0e-25 117.1 88 65.9
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 8.0e-25 117.1 88 64.8
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 8.0e-25 117.1 88 64.8
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 8.0e-25 117.1 89 64.0
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 8.0e-25 117.1 91 63.7
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 8.0e-25 117.1 91 63.7
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 1.0e-24 116.7 88 63.6
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 1.0e-24 116.7 111 61.3
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 1.4e-24 116.3 88 64.8
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 1.4e-24 116.3 91 67.0
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 1.8e-24 115.9 95 63.2
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 1.8e-24 115.9 88 63.6
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 1.8e-24 115.9 88 63.6
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 1.8e-24 115.9 88 63.6
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 1.8e-24 115.9 88 63.6
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 2.3e-24 115.5 91 63.7
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 4.0e-24 114.8 89 66.3
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 5.2e-24 114.4 99 60.6
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 6.8e-24 114.0 88 63.6
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 6.8e-24 114.0 92 64.1
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 8.9e-24 113.6 86 65.1
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 1.2e-23 113.2 88 63.6
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 1.2e-23 113.2 88 67.0
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 1.5e-23 112.8 88 62.5
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 1.5e-23 112.8 94 59.6
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 4.4e-23 111.3 91 64.8
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 7.5e-23 110.5 88 63.6
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 1.7e-22 109.4 88 64.8
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 2.2e-22 109.0 83 63.9
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 2.2e-22 109.0 100 58.0
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 2.8e-22 108.6 88 64.8
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 8.3e-22 107.1 88 60.2
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 1.8e-21 105.9 92 58.7
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 5.4e-21 104.4 92 62.0
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 9.2e-21 103.6 88 58.0
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 2.0e-20 102.4 93 55.9
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 7.8e-20 100.5 88 56.8
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 7.8e-20 100.5 88 56.8
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 6.6e-19 97.4 93 52.7
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 2.5e-18 95.5 96 50.0
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 3.3e-18 95.1 91 51.6
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 1.8e-16 89.4 96 47.9
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 2.3e-16 89.0 103 44.7
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 2.6e-15 85.5 90 47.8
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 5.8e-15 84.3 102 46.1
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 9.8e-15 83.6 95 43.2
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 8.3e-14 80.5 97 42.3
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 1.7e-11 72.8 83 48.2
AUR62009752 Chenopodium quinoa HOM05D006639 ORTHO05D008339 3.7e-06 55.1 38 63.2
Lsat_1_v5_gn_6_29620 Lactuca sativa HOM05D000297 ORTHO05D000193 6.4e-06 54.3 65 32.3
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 8.3e-06 53.9 53 52.8


User provided reference genes

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