Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006073 Daucus carota HOM05D002693 ORTHO05D035002 8.6e-20 99.4 51 100.0
DCAR_007373 Daucus carota HOM05D002693 ORTHO05D035002 2.7e-13 77.8 40 100.0
RcHm_v2.0_Chr5g0027641 Rosa chinensis HOM05D002693 ORTHO05D035002 6.0e-13 76.6 45 86.7
DCAR_016425 Daucus carota HOM05D002693 ORTHO05D008074 5.1e-12 73.6 43 90.7
HanXRQChr05g0156121 Helianthus annuus HOM05D002693 ORTHO05D008074 5.1e-12 73.6 43 90.7
PSO478G4803 Papaver somniferum HOM05D002693 ORTHO05D008074 5.1e-12 73.6 43 90.7
PSO017G1659 Papaver somniferum HOM05D002693 ORTHO05D008074 1.1e-11 72.4 43 88.4
Ah.15g095420 Amaranthus hybridus HOM05D002693 ORTHO05D008074 1.5e-11 72.0 43 88.4
ECA246G3621 Erigeron canadensis HOM05D002693 ORTHO05D008074 1.5e-11 72.0 43 88.4
EL10Ac7g18055 Beta vulgaris HOM05D002693 ORTHO05D008074 3.3e-11 70.9 43 86.0
Lsat_1_v5_gn_5_13101 Lactuca sativa HOM05D002693 ORTHO05D008074 3.3e-11 70.9 43 88.4
CANSAT80G0417 Cannabis sativa HOM05D002693 ORTHO05D008074 5.6e-11 70.1 43 83.7
CSS0044980 Camellia sinensis var. sinensis HOM05D002693 ORTHO05D008074 7.3e-11 69.7 43 86.0
Dinv38484 Davidia involucrata HOM05D002693 ORTHO05D008074 7.3e-11 69.7 43 86.0
Nn4g22488 Nelumbo nucifera HOM05D002693 ORTHO05D008074 7.3e-11 69.7 43 86.0
Actinidia36776 Actinidia chinensis HOM05D002693 ORTHO05D008074 1.6e-10 68.6 43 83.7
Aqoxy3G01325 Aquilegia oxysepala HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 86.0
Cpa.g.sc4.47 Carica papaya HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
AUR62001263 Chenopodium quinoa HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
AUR62025747 Chenopodium quinoa HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
ClCG06G017610 Citrullus lanatus HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
MELO3C026235.2 Cucumis melo HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
DCAR_013582 Daucus carota HOM05D002693 ORTHO05D008074 2.1e-10 68.2 40 85.0
Eucgr.K02765 Eucalyptus grandis HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
FvH4_5g07070 Fragaria vesca HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
FAN04G2647 Fragaria x ananassa HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
FAN08G3291 Fragaria x ananassa HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
FAN13G1374 Fragaria x ananassa HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
FAN18G1738 Fragaria x ananassa HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
Glyma.04G191700 Glycine max HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 81.4
Glyma.06G174200 Glycine max HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 81.4
Peaxi162Scf00089g00838 Petunia axillaris HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
Potri.015G088500 Populus trichocarpa HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
Prupe.5G159800 Prunus persica HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
RcHm_v2.0_Chr7g0191481 Rosa chinensis HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
Sabra15G0111400 Salix brachista HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
Sed0019566 Sechium edule HOM05D002693 ORTHO05D008074 2.1e-10 68.2 43 83.7
MSTRG.11525 Avicennia marina HOM05D002693 ORTHO05D008074 2.8e-10 67.8 40 87.5
Ciclev10020897m.g Citrus clementina HOM05D002693 ORTHO05D008074 2.8e-10 67.8 43 83.7
DCAR_009115 Daucus carota HOM05D002693 ORTHO05D008074 2.8e-10 67.8 39 87.2
PGR044G0360 Punica granatum HOM05D002693 ORTHO05D008074 2.8e-10 67.8 43 81.4
Rhsim12G0171100 Rhododendron simsii HOM05D002693 ORTHO05D008074 2.8e-10 67.8 43 83.7
SGA_v2.0_scaffold90G27784 Striga asiatica HOM05D002693 ORTHO05D008074 2.8e-10 67.8 40 87.5
TAR622G1430 Trochodendron aralioides HOM05D002693 ORTHO05D008074 2.8e-10 67.8 43 83.7
GSVIVG01007572001 Vitis vinifera HOM05D002693 ORTHO05D008074 2.8e-10 67.8 43 83.7
AT3G48420 Arabidopsis thaliana HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
BcaB01g00815 Brassica carinata HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
BcaC01g02341 Brassica carinata HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
BcaC07g39324 Brassica carinata HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
A06p19280 Brassica napus HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
C03p66400 Brassica napus HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
C08p23410 Brassica napus HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
BolC3t18913H Brassica oleracea HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
BolC8t49969H Brassica oleracea HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
BraA06t25011Z Brassica rapa HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
Carub.0005s1458 Capsella rubella HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
Cfa018903 Carpinus fangiana HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
Migut.O00226 Erythranthe guttata HOM05D002693 ORTHO05D008074 3.6e-10 67.4 40 85.0
Thhalv10010540m.g Eutrema salsugineum HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
MD14G1165800 Malus domestica HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 83.7
Sp5g13640 Schrenkiella parvula HOM05D002693 ORTHO05D008074 3.6e-10 67.4 43 81.4
MBI08_g18358_MAGBIO Magnolia biondii HOM05D002693 ORTHO05D008074 4.8e-10 67.0 43 79.1
VMungo1309G0913 Vigna mungo HOM05D002693 ORTHO05D008074 4.8e-10 67.0 43 79.1
CsaV3_1G000830 Cucumis sativus L. HOM05D002693 ORTHO05D008074 6.2e-10 66.6 43 81.4
TWI23G0591 Tripterygium wilfordii HOM05D002693 ORTHO05D008074 6.2e-10 66.6 43 81.4
unitig_0.g1407 Utricularia gibba HOM05D002693 ORTHO05D008074 6.2e-10 66.6 40 82.5
CiPaw.11G013400 Carya illinoinensis HOM05D002693 ORTHO05D008074 8.1e-10 66.2 43 81.4
Ca_16101_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 8.1e-10 66.2 43 81.4
Ca_30077_v3 Cicer arietinum L. HOM05D005390 ORTHO05D007086 8.1e-10 66.2 43 81.4
Psat5g139480 Pisum sativum HOM05D005390 ORTHO05D007086 8.1e-10 66.2 43 81.4
SalBow5G1929 Salvia bowleyana HOM05D002693 ORTHO05D008074 8.1e-10 66.2 40 85.0
Hund18531 Selenicereus undatus HOM05D002693 ORTHO05D008074 8.1e-10 66.2 43 81.4
Aa31LG4G16990 Aethionema arabicum HOM05D002693 ORTHO05D008074 1.1e-09 65.9 43 81.4
Nitab4.5_0001360g0120 Nicotiana tabacum HOM05D002693 ORTHO05D008074 1.1e-09 65.9 43 79.1
Nitab4.5_0002531g0130 Nicotiana tabacum HOM05D002693 ORTHO05D008074 1.1e-09 65.9 43 79.1
QL10p005573 Quercus lobata HOM05D002693 ORTHO05D008074 1.1e-09 65.9 43 81.4
Solyc03g111610.3 Solanum lycopersicum HOM05D002693 ORTHO05D008074 1.1e-09 65.9 43 81.4
PGSC0003DMG400015165 Solanum tuberosum HOM05D002693 ORTHO05D008074 1.1e-09 65.9 43 81.4
ATR0824G037 Amborella trichopoda HOM05D002693 ORTHO05D008074 1.4e-09 65.5 43 79.1
A06p27660 Brassica napus HOM05D002693 ORTHO05D008074 1.4e-09 65.5 43 76.7
Cc04_g10650 Coffea canephora HOM05D002693 ORTHO05D008074 1.4e-09 65.5 43 81.4
Oeu053509.1 Olea europaea HOM05D002693 ORTHO05D008074 1.4e-09 65.5 43 81.4
arahy.Tifrunner.gnm1.ann1.3ZI7DD Arachis hypogaea HOM05D002693 ORTHO05D008074 1.8e-09 65.1 43 79.1
Duzib205G0413 Durio zibethinus HOM05D002693 ORTHO05D008074 1.8e-09 65.1 40 82.5
Sc22g0003900 Simmondsia chinensis HOM05D002693 ORTHO05D008074 1.8e-09 65.1 43 81.4
THA.LOC104821498 Tarenaya hassleriana HOM05D002693 ORTHO05D008074 1.8e-09 65.1 43 79.1
BcaB02g10654 Brassica carinata HOM05D002693 ORTHO05D008074 2.4e-09 64.7 46 76.1
Lalb_Chr11g0069751 Lupinus albus HOM05D002693 ORTHO05D008074 2.4e-09 64.7 43 76.7
Phvul.009G169900 Phaseolus vulgaris HOM05D002693 ORTHO05D008074 2.4e-09 64.7 43 76.7
CAN.G472.45 Capsicum annuum HOM05D002693 ORTHO05D008074 3.1e-09 64.3 43 79.1
COL.COLO4_04553 Corchorus olitorius HOM05D002693 ORTHO05D008074 3.1e-09 64.3 40 80.0
Lj1g0007454 Lotus japonicus HOM05D002693 ORTHO05D008074 3.1e-09 64.3 43 76.7
Thecc.03G121000 Theobroma cacao HOM05D002693 ORTHO05D008074 3.1e-09 64.3 40 80.0
Os03g0565200 Oryza sativa ssp. japonica HOM05D002693 ORTHO05D008074 4.0e-09 63.9 43 76.7
Gohir.A09G244700 Gossypium hirsutum HOM05D002693 ORTHO05D008074 5.3e-09 63.5 40 80.0
Gorai.006G270000 Gossypium raimondii HOM05D002693 ORTHO05D008074 5.3e-09 63.5 40 80.0
Sopen03g030730 Solanum pennellii HOM05D002693 ORTHO05D008074 5.3e-09 63.5 43 79.1
CDE06G2530 Ceratophyllum demersum HOM05D002693 ORTHO05D008074 6.9e-09 63.2 43 76.7
Medtr3g075230 Medicago truncatula HOM05D002693 ORTHO05D008074 6.9e-09 63.2 43 74.4
SEGI_18096 Sequoiadendron giganteum HOM05D002693 ORTHO05D008074 6.9e-09 63.2 43 74.4
TPR.G38598 Trifolium pratense HOM05D002693 ORTHO05D008074 6.9e-09 63.2 43 74.4
HPP92_010508 Vanilla planifolia HOM05D002693 ORTHO05D008074 6.9e-09 63.2 43 76.7
MD06G1160600 Malus domestica HOM05D002693 ORTHO05D008074 9.0e-09 62.8 43 76.7
Manes.06G113900 Manihot esculenta HOM05D002693 ORTHO05D008074 9.0e-09 62.8 43 79.1
Gohir.D09G245600 Gossypium hirsutum HOM05D002693 ORTHO05D008074 1.5e-08 62.0 40 77.5
Zm00001eb113090 Zea mays HOM05D002693 ORTHO05D008074 2.0e-08 61.6 43 74.4
BcaNung06062 Brassica carinata HOM05D002693 ORTHO05D008074 4.4e-08 60.5 47 72.3
Prupe.5G159700 Prunus persica HOM05D002693 ORTHO05D008074 4.4e-08 60.5 41 78.0
SGA_v2.0_scaffold237G43872 Striga asiatica HOM05D002693 ORTHO05D008074 1.7e-07 58.5 43 65.1
AagrBONN_evm.TU.Sc2ySwM_362.2434 Anthoceros agrestis HOM05D002693 ORTHO05D008074 3.8e-07 57.4 43 69.8
SMO367G1130 Selaginella moellendorffii HOM05D002693 ORTHO05D008074 3.8e-07 57.4 43 67.4
CBR_g22462 Chara braunii HOM05D002693 ORTHO05D008074 1.4e-06 55.5 43 65.1
Pp3c10_2693 Physcomitrium patens HOM05D002693 ORTHO05D008074 4.2e-06 53.9 43 67.4
arahy.Tifrunner.gnm1.ann1.V8X883 Arachis hypogaea HOM05D005390 ORTHO05D007086 5.4e-06 53.5 43 72.1
Mapoly0082s0060 Marchantia polymorpha HOM05D002693 ORTHO05D008074 9.3e-06 52.8 43 65.1


User provided reference genes

Program Settings