Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006064 Daucus carota HOM05D003665 ORTHO05D004387 0.0e+00 1171.4 600 100.0
Dinv09884 Davidia involucrata HOM05D003665 ORTHO05D004387 1.3e-220 770.0 596 69.5
vmacro03198 Vaccinium macrocarpon HOM05D003665 ORTHO05D004387 3.0e-212 742.3 573 71.0
TAR623G1097 Trochodendron aralioides HOM05D003665 ORTHO05D004387 4.3e-211 738.4 598 66.4
GSVIVG01025191001 Vitis vinifera HOM05D003665 ORTHO05D004387 2.8e-210 735.7 587 68.1
Hma1.2p1_0058F.1_g032480 Hydrangea macrophylla HOM05D003665 ORTHO05D004387 1.5e-208 729.9 570 71.8
CSS0007464 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 7.6e-208 727.6 608 66.8
Cfa011312 Carpinus fangiana HOM05D003665 ORTHO05D004387 7.9e-205 717.6 560 69.8
MSTRG.18661 Avicennia marina HOM05D003665 ORTHO05D004387 1.0e-204 717.2 583 67.1
Actinidia24103 Actinidia chinensis HOM05D003665 ORTHO05D004387 5.1e-204 714.9 569 71.7
CSS0036787 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 3.3e-203 712.2 556 69.2
CiPaw.13G113600 Carya illinoinensis HOM05D003665 ORTHO05D004387 8.2e-202 707.6 597 67.2
MBI05_g08786_MAGBIO Magnolia biondii HOM05D003665 ORTHO05D004387 1.4e-201 706.8 584 66.4
Sopen03g034790 Solanum pennellii HOM05D003665 ORTHO05D004387 1.4e-201 706.8 584 65.6
MD11G1136600 Malus domestica HOM05D003665 ORTHO05D004387 6.9e-201 704.5 593 64.8
CiPaw.14G080900 Carya illinoinensis HOM05D003665 ORTHO05D004387 9.0e-201 704.1 588 67.2
Eucgr.B02502 Eucalyptus grandis HOM05D003665 ORTHO05D004387 1.2e-200 703.7 515 72.0
Solyc03g115810.3 Solanum lycopersicum HOM05D003665 ORTHO05D004387 1.5e-200 703.4 584 65.1
TWI31G1339 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 2.0e-200 703.0 586 65.7
Duzib170G0108 Durio zibethinus HOM05D003665 ORTHO05D004387 5.8e-200 701.4 587 67.1
Potri.009G014400 Populus trichocarpa HOM05D003665 ORTHO05D004387 5.8e-200 701.4 539 70.1
RcHm_v2.0_Chr5g0058821 Rosa chinensis HOM05D003665 ORTHO05D004387 1.7e-199 699.9 567 66.3
Thecc.09G341400 Theobroma cacao HOM05D003665 ORTHO05D004387 2.2e-199 699.5 431 81.2
FAN11G0686 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.8e-199 698.7 570 65.1
FAN25G3303 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.8e-199 698.7 569 65.6
HanXRQChr01g0019371 Helianthus annuus HOM05D003665 ORTHO05D004387 6.5e-199 698.0 580 66.0
SalBow3G4611 Salvia bowleyana HOM05D003665 ORTHO05D004387 6.5e-199 698.0 578 66.3
Nn2g12882 Nelumbo nucifera HOM05D003665 ORTHO05D004387 2.5e-198 696.0 546 68.1
FvH4_3g32210 Fragaria vesca HOM05D003665 ORTHO05D004387 4.2e-198 695.3 584 64.4
SGA_v2.0_scaffold97G29239 Striga asiatica HOM05D003665 ORTHO05D004387 5.5e-198 694.9 575 66.3
Cpa.g.sc216.2 Carica papaya HOM05D003665 ORTHO05D004387 7.1e-198 694.5 589 67.1
Cc00_g12880 Coffea canephora HOM05D003665 ORTHO05D004387 7.1e-198 694.5 588 65.8
Prupe.6G102100 Prunus persica HOM05D003665 ORTHO05D004387 1.2e-197 693.7 423 81.1
SGA_v2.0_scaffold61G21127 Striga asiatica HOM05D003665 ORTHO05D004387 1.2e-197 693.7 606 64.9
ClCG01G013730 Citrullus lanatus HOM05D003665 ORTHO05D004387 2.1e-197 693.0 598 64.5
Migut.D02227 Erythranthe guttata HOM05D003665 ORTHO05D004387 3.5e-197 692.2 605 63.3
QL01p022122 Quercus lobata HOM05D003665 ORTHO05D004387 7.9e-197 691.0 644 61.5
Aqoxy4G03025 Aquilegia oxysepala HOM05D003665 ORTHO05D004387 1.0e-196 690.6 514 70.8
Duzib168G1080 Durio zibethinus HOM05D003665 ORTHO05D004387 1.0e-196 690.6 588 67.7
Sabra09G0007600 Salix brachista HOM05D003665 ORTHO05D004387 1.0e-196 690.6 579 64.4
CsaV3_1G014040 Cucumis sativus L. HOM05D003665 ORTHO05D004387 1.3e-196 690.3 597 65.0
FAN21G1776 Fragaria x ananassa HOM05D003665 ORTHO05D004387 1.3e-196 690.3 488 73.2
Potri.004G211200 Populus trichocarpa HOM05D003665 ORTHO05D004387 1.8e-196 689.9 579 66.8
Gohir.A03G033500 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.3e-196 689.5 593 64.2
CANSAT54G1114 Cannabis sativa HOM05D003665 ORTHO05D004387 6.7e-196 688.0 588 65.0
MD03G1118200 Malus domestica HOM05D003665 ORTHO05D004387 6.7e-196 688.0 584 66.8
MELO3C004874.2 Cucumis melo HOM05D003665 ORTHO05D004387 1.1e-195 687.2 597 65.2
Glyma.12G172200 Glycine max HOM05D003665 ORTHO05D004387 1.1e-195 687.2 470 75.5
PGR119G2069 Punica granatum HOM05D003665 ORTHO05D004387 1.1e-195 687.2 488 74.4
FAN16G1206 Fragaria x ananassa HOM05D003665 ORTHO05D004387 2.5e-195 686.0 488 73.2
Manes.11G145800 Manihot esculenta HOM05D003665 ORTHO05D004387 3.3e-195 685.6 584 66.3
Psat0s134g0040 Pisum sativum HOM05D003665 ORTHO05D004387 4.3e-195 685.3 522 68.8
TAR369G0153 Trochodendron aralioides HOM05D003665 ORTHO05D004387 7.4e-195 684.5 598 64.4
Sc06g0010260 Simmondsia chinensis HOM05D003665 ORTHO05D004387 9.7e-195 684.1 513 72.1
Ciclev10028088m.g Citrus clementina HOM05D003665 ORTHO05D004387 1.3e-194 683.7 530 69.1
ATR0033G036 Amborella trichopoda HOM05D003665 ORTHO05D004387 2.8e-194 682.6 489 73.0
Gorai.003G141900 Gossypium raimondii HOM05D003665 ORTHO05D004387 3.7e-194 682.2 593 63.6
EL10Ac2g02422 Beta vulgaris HOM05D003665 ORTHO05D004387 6.3e-194 681.4 598 64.9
Atru.chr3.3622 Acer truncatum HOM05D003665 ORTHO05D004387 1.4e-193 680.2 495 72.3
Haze_23819 Corylus avellana HOM05D003665 ORTHO05D004387 1.4e-193 680.2 629 63.3
Gohir.D03G134800 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.8e-193 679.9 593 63.7
Sed0022671 Sechium edule HOM05D003665 ORTHO05D004387 9.0e-193 677.6 582 64.6
ECA248G0778 Erigeron canadensis HOM05D003665 ORTHO05D004387 2.6e-192 676.0 593 64.1
Glyma.13G325700 Glycine max HOM05D003665 ORTHO05D004387 2.6e-192 676.0 468 74.8
PSO384G0045 Papaver somniferum HOM05D003665 ORTHO05D004387 2.6e-192 676.0 478 74.5
Dinv32740 Davidia involucrata HOM05D003665 ORTHO05D004387 4.5e-192 675.2 582 65.5
Ca_19262_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 2.9e-191 672.5 503 72.8
Phvul.005G134800 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 2.9e-191 672.5 539 67.7
PSO339G3164 Papaver somniferum HOM05D003665 ORTHO05D004387 1.4e-190 670.2 519 69.2
Gorai.009G107400 Gossypium raimondii HOM05D003665 ORTHO05D004387 1.9e-190 669.8 588 63.4
Gohir.D05G103100 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.6e-189 666.8 588 63.6
Lj3g0004290 Lotus japonicus HOM05D003665 ORTHO05D004387 2.7e-189 666.0 507 69.6
Medtr2g094470 Medicago truncatula HOM05D003665 ORTHO05D004387 1.0e-188 664.1 471 72.2
Phvul.011G079600 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 3.9e-188 662.1 476 71.6
ECA238G1380 Erigeron canadensis HOM05D003665 ORTHO05D004387 2.5e-187 659.4 574 63.6
Oeu030188.3 Olea europaea HOM05D003665 ORTHO05D004387 4.3e-187 658.7 653 58.7
Lalb_Chr24g0394651 Lupinus albus HOM05D003665 ORTHO05D004387 5.7e-187 658.3 411 80.5
Medtr4g059000 Medicago truncatula HOM05D003665 ORTHO05D004387 5.7e-187 658.3 504 69.8
VMungo1080G0406 Vigna mungo HOM05D003665 ORTHO05D004387 5.7e-187 658.3 539 66.6
Psat5g278960 Pisum sativum HOM05D003665 ORTHO05D004387 7.4e-187 657.9 470 72.1
Peaxi162Scf00274g00347 Petunia axillaris HOM05D003665 ORTHO05D004387 1.3e-186 657.1 597 62.8
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 3.7e-186 655.6 589 65.4
VMungo1127G1530 Vigna mungo HOM05D003665 ORTHO05D004387 1.1e-185 654.1 477 71.5
Lalb_Chr19g0137231 Lupinus albus HOM05D003665 ORTHO05D004387 1.4e-185 653.7 424 76.9
TPR.G11547 Trifolium pratense HOM05D003665 ORTHO05D004387 5.3e-185 651.7 470 70.9
Gohir.A05G103400 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.0e-184 649.8 588 62.9
Lalb_Chr22g0350251 Lupinus albus HOM05D003665 ORTHO05D004387 2.6e-184 649.4 512 69.1
Ca_01409_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 7.7e-184 647.9 461 72.2
Nitab4.5_0001997g0130 Nicotiana tabacum HOM05D003665 ORTHO05D004387 1.3e-183 647.1 579 64.1
arahy.Tifrunner.gnm1.ann1.IYQC31 Arachis hypogaea HOM05D003665 ORTHO05D004387 1.4e-182 643.7 471 71.1
THA.LOC104826364 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 1.9e-182 643.3 602 60.6
Lj3g0015527 Lotus japonicus HOM05D003665 ORTHO05D004387 1.2e-181 640.6 407 78.6
Gorai.004G229200 Gossypium raimondii HOM05D003665 ORTHO05D004387 4.7e-181 638.6 478 71.1
arahy.Tifrunner.gnm1.ann1.RTB9TW Arachis hypogaea HOM05D003665 ORTHO05D004387 1.4e-180 637.1 469 70.6
Gohir.A08G198200 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.8e-180 636.7 587 62.2
TWI79G0002 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 1.8e-180 636.7 589 62.1
Lsat_1_v5_gn_1_64201 Lactuca sativa HOM05D003665 ORTHO05D004387 3.9e-180 635.6 581 62.5
Lsat_1_v5_gn_2_100120 Lactuca sativa HOM05D003665 ORTHO05D004387 5.7e-179 631.7 586 60.2
HanXRQChr14g0452781 Helianthus annuus HOM05D003665 ORTHO05D004387 7.4e-179 631.3 584 60.4
BolC3t15507H Brassica oleracea HOM05D003665 ORTHO05D004387 9.7e-179 630.9 563 60.9
C03p31650 Brassica napus HOM05D003665 ORTHO05D004387 4.1e-177 625.5 563 60.6
THA.LOC104815747 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 4.1e-177 625.5 586 60.1
arahy.Tifrunner.gnm1.ann1.567MYZ Arachis hypogaea HOM05D003665 ORTHO05D004387 7.0e-177 624.8 512 67.8
Sp4g11190 Schrenkiella parvula HOM05D003665 ORTHO05D004387 1.5e-176 623.6 597 58.6
BcaC01g04965 Brassica carinata HOM05D003665 ORTHO05D004387 2.0e-176 623.2 563 60.2
AL4G21640 Arabidopsis lyrata HOM05D003665 ORTHO05D004387 2.6e-176 622.9 588 58.8
CARHR121340 Cardamine hirsuta HOM05D003665 ORTHO05D004387 2.6e-176 622.9 589 57.6
BraA03t11853Z Brassica rapa HOM05D003665 ORTHO05D004387 1.0e-175 620.9 583 59.2
Thhalv10016386m.g Eutrema salsugineum HOM05D003665 ORTHO05D004387 1.0e-175 620.9 600 57.5
AT2G28390 Arabidopsis thaliana HOM05D003665 ORTHO05D004387 2.2e-175 619.8 589 58.9
A03p26380 Brassica napus HOM05D003665 ORTHO05D004387 2.2e-175 619.8 583 59.0
Nitab4.5_0001195g0040 Nicotiana tabacum HOM05D003665 ORTHO05D004387 1.1e-174 617.5 584 62.3
BcaB01g03101 Brassica carinata HOM05D003665 ORTHO05D004387 5.5e-174 615.1 598 58.7
C04p23090 Brassica napus HOM05D003665 ORTHO05D004387 5.5e-174 615.1 583 59.3
Carub.0004s0931 Capsella rubella HOM05D003665 ORTHO05D004387 2.1e-173 613.2 588 58.3
BolC4t23802H Brassica oleracea HOM05D003665 ORTHO05D004387 1.4e-172 610.5 583 59.3
Aa31LG5G7830 Aethionema arabicum HOM05D003665 ORTHO05D004387 6.7e-172 608.2 604 57.1
BcaB06g25420 Brassica carinata HOM05D003665 ORTHO05D004387 1.5e-171 607.1 582 57.0
COL.COLO4_18330 Corchorus olitorius HOM05D003665 ORTHO05D004387 8.2e-170 601.3 598 60.2
SEGI_12034 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 1.4e-169 600.5 533 61.5
A07p18960 Brassica napus HOM05D003665 ORTHO05D004387 2.4e-169 599.7 586 58.2
BraA07t29601Z Brassica rapa HOM05D003665 ORTHO05D004387 5.3e-169 598.6 582 58.6
arahy.Tifrunner.gnm1.ann1.B5LWM3 Arachis hypogaea HOM05D003665 ORTHO05D004387 2.6e-168 596.3 447 70.5
Gohir.D08G215600 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.6e-168 596.3 447 71.4
Os01g0976000 Oryza sativa ssp. japonica HOM05D003665 ORTHO05D004387 1.9e-166 590.1 575 57.4
PGR102G1414 Punica granatum HOM05D003665 ORTHO05D004387 1.8e-161 573.5 523 59.8
Ah.12g061180 Amaranthus hybridus HOM05D003665 ORTHO05D004387 1.7e-159 567.0 427 67.9
HPP92_006598 Vanilla planifolia HOM05D003665 ORTHO05D004387 3.4e-155 552.7 487 61.8
Hund03712 Selenicereus undatus HOM05D003665 ORTHO05D004387 6.3e-154 548.5 342 79.8
SEGI_16973 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 1.2e-152 544.3 410 65.4
Nitab4.5_0001211g0250 Nicotiana tabacum HOM05D003665 ORTHO05D004387 6.3e-146 521.9 598 53.5
Nitab4.5_0005900g0050 Nicotiana tabacum HOM05D003665 ORTHO05D004387 2.3e-143 513.5 595 53.1
Mapoly0115s0070 Marchantia polymorpha HOM05D003665 ORTHO05D004387 8.6e-143 511.5 563 51.3
SMO356G0046 Selaginella moellendorffii HOM05D003665 ORTHO05D004387 2.5e-142 510.0 517 53.2
Lj2C1027G11 Lonicera japonica HOM05D003665 ORTHO05D004387 3.1e-140 503.1 592 53.5
AUR62037705 Chenopodium quinoa HOM05D003665 ORTHO05D004387 7.5e-139 498.4 609 52.7
Actinidia12926 Actinidia chinensis HOM05D003665 ORTHO05D004387 2.4e-137 493.4 325 78.2
Peaxi162Scf00106g00431 Petunia axillaris HOM05D003665 ORTHO05D004387 2.4e-137 493.4 418 62.2
AUR62020295 Chenopodium quinoa HOM05D003665 ORTHO05D004387 7.8e-136 488.4 493 59.0
Pp3c10_13820 Physcomitrium patens HOM05D003665 ORTHO05D004387 6.6e-135 485.3 482 54.8
AagrBONN_evm.TU.Sc2ySwM_228.3586 Anthoceros agrestis HOM05D003665 ORTHO05D004387 1.5e-134 484.2 446 56.1
Pp3c3_30360 Physcomitrium patens HOM05D003665 ORTHO05D004387 2.1e-133 480.3 426 57.5
AagrBONN_evm.TU.Sc2ySwM_117.1231 Anthoceros agrestis HOM05D003665 ORTHO05D004387 4.6e-128 462.6 420 56.0
PGSC0003DMG400019504 Solanum tuberosum HOM05D003665 ORTHO05D004387 8.6e-127 458.4 401 63.8
Actinidia13994 Actinidia chinensis HOM05D003665 ORTHO05D004387 6.0e-120 435.6 283 79.2
Sabra04G0142700 Salix brachista HOM05D003665 ORTHO05D004387 1.9e-118 430.6 338 68.0
unitig_899.g14918 Utricularia gibba HOM05D003665 ORTHO05D004387 2.8e-117 426.8 577 48.2
CAN.G479.67 Capsicum annuum HOM05D003665 ORTHO05D004387 2.4e-108 397.1 361 62.3
CDE08G0353 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.5e-99 367.9 273 69.2
Zm00001eb139700 Zea mays HOM05D003665 ORTHO05D004387 2.4e-97 360.5 294 63.3
BcaB06g25423 Brassica carinata HOM05D003665 ORTHO05D004387 8.7e-95 352.1 378 56.3
CBR_g29308 Chara braunii HOM05D000019 ORTHO05D000002 6.7e-71 272.7 211 60.7
CDE08G1291 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.7e-69 268.1 230 63.0
Lsat_1_v5_gn_8_29480 Lactuca sativa HOM05D003665 ORTHO05D004387 1.7e-66 258.1 171 73.7
Atru.chr3.3619 Acer truncatum HOM05D003665 ORTHO05D004387 5.5e-65 253.1 189 67.7
CDE02G1163 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 2.6e-54 217.6 232 53.9
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 8.2e-53 212.6 153 68.6
Cre03.g154500 Chlamydomonas reinhardtii HOM05D003665 ORTHO05D004387 2.4e-52 211.1 283 41.7
CDE02G0373 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 7.0e-52 209.5 165 64.8
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 1.6e-51 208.4 140 72.1
Lsat_1_v5_gn_6_45780 Lactuca sativa HOM05D003665 ORTHO05D004387 3.5e-51 207.2 133 74.4
TPR.G35439 Trifolium pratense HOM05D003665 ORTHO05D004387 4.2e-49 200.3 146 71.2
Actinidia13995 Actinidia chinensis HOM05D003665 ORTHO05D004387 9.4e-49 199.1 105 90.5
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 2.1e-48 198.0 132 72.7
Lsat_1_v5_gn_6_39960 Lactuca sativa HOM05D003665 ORTHO05D004387 1.4e-44 185.3 123 73.2
MCO05G084 Micromonas commoda HOM05D003665 ORTHO05D004387 7.0e-44 183.0 533 27.0
Cfa025752 Carpinus fangiana HOM05D003665 ORTHO05D004387 1.4e-36 158.7 407 27.3
Duzib235G1059 Durio zibethinus HOM05D003665 ORTHO05D004387 3.1e-36 157.5 199 51.8
arahy.Tifrunner.gnm1.ann1.3H693L Arachis hypogaea HOM05D003665 ORTHO05D004387 2.1e-32 144.8 141 55.3
SHI09317 Sapria himalayana HOM05D003665 ORTHO05D004387 1.1e-28 132.5 76 81.6
Ca_23093_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 4.6e-27 127.1 65 92.3
SHI09320 Sapria himalayana HOM05D003665 ORTHO05D004387 5.9e-27 126.7 131 56.5
Duzib084G1104 Durio zibethinus HOM05D003665 ORTHO05D004387 5.0e-26 123.6 240 44.6
VMungo0225G0001 Vigna mungo HOM05D003665 ORTHO05D004387 1.2e-22 112.5 68 80.9
VMungo1074G0001 Vigna mungo HOM05D003665 ORTHO05D004387 2.9e-21 107.8 116 51.7
SHI09315 Sapria himalayana HOM05D003665 ORTHO05D004387 4.9e-21 107.1 53 90.6
SHI09316 Sapria himalayana HOM05D003665 ORTHO05D004387 1.2e-19 102.4 63 73.0
Glyma.11G146000 Glycine max HOM05D003665 ORTHO05D004387 2.0e-19 101.7 108 58.3
BolC4t27275H Brassica oleracea HOM05D003665 ORTHO05D004387 4.9e-13 80.5 126 42.9
Lalb_Chr22g0350671 Lupinus albus HOM05D003665 ORTHO05D004387 2.7e-11 74.7 43 83.7
HanXRQChr06g0179151 Helianthus annuus HOM05D003665 ORTHO05D004387 2.1e-08 65.1 43 69.8
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 3.1e-07 61.2 33 90.9
Lsat_1_v5_gn_4_144501 Lactuca sativa HOM05D000361 ORTHO05D005006 8.9e-07 59.7 33 87.9


User provided reference genes

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