Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006063 Daucus carota HOM05D006436 ORTHO05D008011 7.0e-54 214.2 149 100.0
QL08p017466 Quercus lobata HOM05D006436 ORTHO05D008011 2.6e-40 169.1 139 78.4
Psat2g043120 Pisum sativum HOM05D006436 ORTHO05D008011 4.4e-40 168.3 138 86.2
LjContig00141g0009494 Lotus japonicus HOM05D006436 ORTHO05D008011 5.8e-40 167.9 138 85.5
Ca_05765_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 1.3e-39 166.8 138 84.8
Ca_18506_v3 Cicer arietinum L. HOM05D006436 ORTHO05D008011 2.9e-39 165.6 138 84.1
HanXRQChr10g0309911 Helianthus annuus HOM05D006436 ORTHO05D008011 2.9e-39 165.6 138 85.5
Thecc.09G311900 Theobroma cacao HOM05D006436 ORTHO05D008011 1.4e-38 163.3 138 84.1
CSS0031788 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 1.9e-38 162.9 138 86.2
arahy.Tifrunner.gnm1.ann1.QIUU4Q Arachis hypogaea HOM05D006436 ORTHO05D008011 2.4e-38 162.5 138 82.6
arahy.Tifrunner.gnm1.ann1.RB24L7 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.4e-38 162.5 138 82.6
RcHm_v2.0_Chr7g0218931 Rosa chinensis HOM05D006436 ORTHO05D008011 2.4e-38 162.5 138 84.8
Phvul.008G233200 Phaseolus vulgaris HOM05D006436 ORTHO05D008011 3.2e-38 162.2 138 83.3
Eucgr.J01642 Eucalyptus grandis HOM05D006436 ORTHO05D008011 4.1e-38 161.8 138 80.4
TAR365G0111 Trochodendron aralioides HOM05D006436 ORTHO05D008011 4.1e-38 161.8 138 84.8
AT5G37290 Arabidopsis thaliana HOM05D006436 ORTHO05D008011 7.1e-38 161.0 140 82.9
ECA234G4304 Erigeron canadensis HOM05D006436 ORTHO05D008011 7.1e-38 161.0 138 79.7
arahy.Tifrunner.gnm1.ann1.1G92VG Arachis hypogaea HOM05D006436 ORTHO05D008011 9.2e-38 160.6 138 84.8
arahy.Tifrunner.gnm1.ann1.7TMM1B Arachis hypogaea HOM05D006436 ORTHO05D008011 9.2e-38 160.6 138 78.3
FAN08G3413 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.2e-37 160.2 138 58.7
Manes.02G134600 Manihot esculenta HOM05D006436 ORTHO05D008011 2.1e-37 159.5 139 56.1
Lalb_Chr16g0392121 Lupinus albus HOM05D006436 ORTHO05D008011 3.5e-37 158.7 138 82.6
CiPaw.03G076800 Carya illinoinensis HOM05D006436 ORTHO05D008011 4.6e-37 158.3 139 83.5
Glyma.14G210900 Glycine max HOM05D006436 ORTHO05D008011 4.6e-37 158.3 138 82.6
Gohir.A07G101500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 4.6e-37 158.3 138 82.6
Gohir.D07G105500 Gossypium hirsutum HOM05D006436 ORTHO05D008011 4.6e-37 158.3 138 82.6
Gorai.001G113600 Gossypium raimondii HOM05D006436 ORTHO05D008011 4.6e-37 158.3 138 82.6
Cc07_g12850 Coffea canephora HOM05D006436 ORTHO05D008011 7.8e-37 157.5 138 82.6
Lj4C253G7 Lonicera japonica HOM05D006436 ORTHO05D008011 7.8e-37 157.5 147 79.6
MBI18_g05914_MAGBIO Magnolia biondii HOM05D006436 ORTHO05D008011 7.8e-37 157.5 138 79.7
Aqoxy7G01157 Aquilegia oxysepala HOM05D006436 ORTHO05D008011 2.3e-36 156.0 138 78.3
Ciclev10022503m.g Citrus clementina HOM05D006436 ORTHO05D008011 2.3e-36 156.0 138 81.2
FvH4_5g27560 Fragaria vesca HOM05D006436 ORTHO05D008011 5.1e-36 154.8 138 82.6
Medtr5g077040 Medicago truncatula HOM05D006436 ORTHO05D008011 5.1e-36 154.8 138 81.9
Prupe.3G143200 Prunus persica HOM05D006436 ORTHO05D008011 5.1e-36 154.8 138 82.6
Cpa.g.sc178.16 Carica papaya HOM05D006436 ORTHO05D008011 6.6e-36 154.5 138 82.6
PGR042G2272 Punica granatum HOM05D006436 ORTHO05D008011 6.6e-36 154.5 139 82.0
Solyc04g014610.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 6.6e-36 154.5 138 81.2
Sopen04g006750 Solanum pennellii HOM05D006436 ORTHO05D008011 6.6e-36 154.5 138 81.2
Atru.chr1.2057 Acer truncatum HOM05D006436 ORTHO05D008011 8.6e-36 154.1 137 80.3
Carub.0007s3243 Capsella rubella HOM05D006436 ORTHO05D008011 8.6e-36 154.1 140 81.4
Carub.0007s3240 Capsella rubella HOM05D006436 ORTHO05D008011 1.1e-35 153.7 140 82.1
MD09G1253300 Malus domestica HOM05D006436 ORTHO05D008011 1.1e-35 153.7 146 76.7
Nitab4.5_0005193g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.1e-35 153.7 138 80.4
Potri.001G225300 Populus trichocarpa HOM05D006436 ORTHO05D008011 1.1e-35 153.7 138 81.9
GSVIVG01035239001 Vitis vinifera HOM05D006436 ORTHO05D008011 1.1e-35 153.7 138 83.3
CDE11G1230 Ceratophyllum demersum HOM05D006436 ORTHO05D008011 1.5e-35 153.3 140 69.3
Rhsim11G0087100 Rhododendron simsii HOM05D006436 ORTHO05D008011 1.5e-35 153.3 137 83.2
FAN18G1736 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.9e-35 152.9 138 81.9
THA.LOC104823829 Tarenaya hassleriana HOM05D006436 ORTHO05D008011 2.5e-35 152.5 138 79.7
Peaxi162Scf00442g00063 Petunia axillaris HOM05D006436 ORTHO05D008011 3.3e-35 152.1 138 80.4
VMungo0647G0400 Vigna mungo HOM05D006436 ORTHO05D008011 3.3e-35 152.1 138 79.0
Hma1.2p1_0158F.1_g069740 Hydrangea macrophylla HOM05D006436 ORTHO05D008011 5.6e-35 151.4 138 81.2
CAN.G268.8 Capsicum annuum HOM05D006436 ORTHO05D008011 7.3e-35 151.0 138 79.0
Os11g0546200 Oryza sativa ssp. japonica HOM05D006436 ORTHO05D008011 1.6e-34 149.8 138 79.0
ClCG01G008580 Citrullus lanatus HOM05D006436 ORTHO05D008011 3.6e-34 148.7 140 78.6
Thhalv10027956m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 3.6e-34 148.7 140 81.4
Sopen04g027290 Solanum pennellii HOM05D006436 ORTHO05D008011 6.2e-34 147.9 138 78.3
PGSC0003DMG400024110 Solanum tuberosum HOM05D006436 ORTHO05D008011 6.2e-34 147.9 138 78.3
TWI77G0906 Tripterygium wilfordii HOM05D006436 ORTHO05D008011 6.2e-34 147.9 141 71.6
Sp1g30670 Schrenkiella parvula HOM05D006436 ORTHO05D008011 8.1e-34 147.5 140 80.7
CARHR215800 Cardamine hirsuta HOM05D006436 ORTHO05D008011 1.1e-33 147.1 139 80.6
Nitab4.5_0012165g0010 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.1e-33 147.1 138 78.3
ATR0706G244 Amborella trichopoda HOM05D006436 ORTHO05D008011 1.4e-33 146.7 138 79.7
FAN18G0548 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.4e-33 146.7 161 49.1
Solyc04g071330.4 Solanum lycopersicum HOM05D006436 ORTHO05D008011 2.4e-33 146.0 138 77.5
Dinv19074 Davidia involucrata HOM05D006436 ORTHO05D008011 3.1e-33 145.6 138 79.7
Oeu012529.1 Olea europaea HOM05D006436 ORTHO05D008011 3.1e-33 145.6 138 80.4
BcaB03g13643 Brassica carinata HOM05D006436 ORTHO05D008011 4.0e-33 145.2 140 79.3
Lsat_1_v5_gn_5_79100 Lactuca sativa HOM05D006436 ORTHO05D008011 4.0e-33 145.2 138 79.0
BraA03t11880Z Brassica rapa HOM05D006436 ORTHO05D008011 5.2e-33 144.8 139 54.7
CSS0035006 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 6.8e-33 144.4 123 78.9
AL7G45650 Arabidopsis lyrata HOM05D006436 ORTHO05D008011 8.9e-33 144.1 140 80.7
HPP92_004857 Vanilla planifolia HOM05D006436 ORTHO05D008011 1.5e-32 143.3 140 79.3
C03p31970 Brassica napus HOM05D006436 ORTHO05D008011 2.0e-32 142.9 139 54.0
BolC3t15539H Brassica oleracea HOM05D006436 ORTHO05D008011 2.0e-32 142.9 139 54.0
BcaC01g04932 Brassica carinata HOM05D006436 ORTHO05D008011 2.6e-32 142.5 138 79.7
Sed0003659 Sechium edule HOM05D006436 ORTHO05D008011 3.4e-32 142.1 138 79.0
Cc00_g04020 Coffea canephora HOM05D006436 ORTHO05D008011 1.3e-31 140.2 131 55.0
MELO3C025074.2 Cucumis melo HOM05D006436 ORTHO05D008011 2.2e-31 139.4 138 78.3
vmacro01486 Vaccinium macrocarpon HOM05D006436 ORTHO05D008011 2.2e-31 139.4 138 79.0
SGA_v2.0_scaffold24G10269 Striga asiatica HOM05D006436 ORTHO05D008011 2.9e-31 139.0 138 69.6
Oeu039710.1 Olea europaea HOM05D006436 ORTHO05D008011 4.9e-31 138.3 138 76.8
COL.COLO4_18608 Corchorus olitorius HOM05D006436 ORTHO05D008011 6.4e-31 137.9 125 82.4
Zm00001eb188680 Zea mays HOM05D006436 ORTHO05D008011 8.4e-31 137.5 138 73.9
Cfa007759 Carpinus fangiana HOM05D006436 ORTHO05D008011 1.9e-30 136.3 138 50.7
CsaV3_5G020600 Cucumis sativus L. HOM05D006436 ORTHO05D008011 3.2e-30 135.6 138 76.1
Sc15g0000210 Simmondsia chinensis HOM05D006436 ORTHO05D008011 9.2e-30 134.0 139 49.6
SMO347G0032 Selaginella moellendorffii HOM05D006436 ORTHO05D008011 2.1e-29 132.9 138 43.5
CANSAT80G1957 Cannabis sativa HOM05D006436 ORTHO05D008011 1.3e-28 130.2 138 75.4
Sabra16G0133900 Salix brachista HOM05D006436 ORTHO05D008011 1.3e-28 130.2 211 37.4
FvH4_5g26310 Fragaria vesca HOM05D006436 ORTHO05D008011 3.9e-28 128.6 142 48.6
Hund24464 Selenicereus undatus HOM05D006436 ORTHO05D008011 4.3e-27 125.2 139 45.3
PSO063G3804 Papaver somniferum HOM05D006436 ORTHO05D008011 1.2e-26 123.6 137 70.8
MSTRG.12143 Avicennia marina HOM05D006436 ORTHO05D008011 3.6e-26 122.1 138 71.7
Migut.A01047 Erythranthe guttata HOM05D006436 ORTHO05D008011 3.6e-26 122.1 138 69.6
Haze_14313 Corylus avellana HOM05D006436 ORTHO05D008011 2.4e-25 119.4 119 50.4
unitig_61.g26181 Utricularia gibba HOM05D006436 ORTHO05D008011 2.4e-25 119.4 155 40.0
arahy.Tifrunner.gnm1.ann1.8KE236 Arachis hypogaea HOM05D006436 ORTHO05D008011 2.6e-24 115.9 114 51.8
PGSC0003DMG400023565 Solanum tuberosum HOM05D006436 ORTHO05D008011 3.4e-24 115.5 113 49.6
Mapoly0028s0068 Marchantia polymorpha HOM05D006436 ORTHO05D008011 4.4e-24 115.2 141 44.0
Nn4g25693 Nelumbo nucifera HOM05D006436 ORTHO05D008011 7.6e-24 114.4 118 49.2
Thhalv10028339m.g Eutrema salsugineum HOM05D006436 ORTHO05D008011 1.7e-23 113.2 128 46.9
FAN13G2473 Fragaria x ananassa HOM05D006436 ORTHO05D008011 1.7e-23 113.2 138 44.9
Aa31LG5G11620 Aethionema arabicum HOM05D006436 ORTHO05D008011 2.2e-23 112.8 140 70.0
SEGI_01802 Sequoiadendron giganteum HOM05D006436 ORTHO05D008011 4.9e-23 111.7 115 45.2
Dinv28234 Davidia involucrata HOM05D006436 ORTHO05D008011 6.0e-21 104.8 109 81.7
Duzib168G0581 Durio zibethinus HOM05D006436 ORTHO05D008011 3.9e-20 102.1 53 86.8
Ah.14g085550 Amaranthus hybridus HOM05D000477 ORTHO05D000338 5.6e-19 98.2 53 79.2
SalBow6G7138 Salvia bowleyana HOM05D006436 ORTHO05D008011 5.6e-19 98.2 138 63.8
EL10Ac5g11211 Beta vulgaris HOM05D006436 ORTHO05D008011 1.6e-18 96.7 140 60.0
AUR62026125 Chenopodium quinoa HOM05D003339 ORTHO05D003847 3.6e-18 95.5 129 69.0
AUR62026126 Chenopodium quinoa HOM05D006436 ORTHO05D008011 3.6e-18 95.5 129 69.0
AUR62028451 Chenopodium quinoa HOM05D003339 ORTHO05D003847 1.1e-17 94.0 52 76.9
Nitab4.5_0000574g0240 Nicotiana tabacum HOM05D006436 ORTHO05D008011 1.8e-17 93.2 48 83.3
AUR62028452 Chenopodium quinoa HOM05D006436 ORTHO05D008011 9.0e-17 90.9 52 76.9
CBR_g12236 Chara braunii HOM05D006436 ORTHO05D008011 7.6e-16 87.8 114 36.8
AagrBONN_evm.TU.Sc2ySwM_368.3316 Anthoceros agrestis HOM05D006436 ORTHO05D008011 5.4e-14 81.6 53 66.0
Thecc.05G304200 Theobroma cacao HOM05D006436 ORTHO05D008011 5.1e-12 75.1 98 42.9
CSS0025543 Camellia sinensis var. sinensis HOM05D006436 ORTHO05D008011 4.3e-11 72.0 104 38.5
CsaV3_1G031100 Cucumis sativus L. HOM05D006436 ORTHO05D008011 1.2e-08 63.9 48 58.3
Haze_10727 Corylus avellana HOM05D006436 ORTHO05D008011 9.3e-06 54.3 30 76.7


User provided reference genes

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