Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 1.0e-99 366.7 180 100.0
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 7.4e-82 307.4 173 80.3
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 6.2e-81 304.3 172 80.8
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 4.0e-80 301.6 173 79.8
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 5.3e-80 301.2 168 79.8
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 5.3e-80 301.2 176 78.4
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 6.9e-80 300.8 172 79.1
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 1.5e-79 299.7 174 75.3
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 1.3e-78 296.6 168 78.6
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 1.3e-78 296.6 175 76.6
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 1.7e-78 296.2 176 74.4
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 2.2e-78 295.8 168 79.2
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 3.8e-78 295.0 173 76.3
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 4.9e-78 294.7 169 78.1
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 4.9e-78 294.7 173 75.7
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 4.9e-78 294.7 172 77.3
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 6.5e-78 294.3 168 78.6
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 6.5e-78 294.3 169 78.1
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 8.4e-78 293.9 177 73.4
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 8.4e-78 293.9 167 78.4
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 8.4e-78 293.9 168 80.4
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 8.4e-78 293.9 168 80.4
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 8.4e-78 293.9 169 75.7
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 1.1e-77 293.5 172 79.1
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 1.4e-77 293.1 168 77.4
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.4e-77 293.1 168 76.8
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 1.4e-77 293.1 173 75.1
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 1.9e-77 292.7 168 76.8
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 1.9e-77 292.7 174 76.4
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 2.5e-77 292.4 170 76.5
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 2.5e-77 292.4 174 76.4
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 4.2e-77 291.6 167 77.8
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 4.2e-77 291.6 167 77.2
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 4.2e-77 291.6 167 77.2
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 7.1e-77 290.8 166 75.9
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 7.1e-77 290.8 168 75.6
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 7.1e-77 290.8 174 77.6
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 9.3e-77 290.4 168 76.2
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 9.3e-77 290.4 168 78.0
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 1.2e-76 290.0 166 77.1
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 1.2e-76 290.0 174 77.0
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 1.2e-76 290.0 168 76.8
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 1.6e-76 289.7 166 77.7
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 1.6e-76 289.7 169 75.7
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.6e-76 289.7 169 75.7
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 1.6e-76 289.7 174 77.6
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.7e-76 288.9 169 75.7
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 3.5e-76 288.5 168 75.6
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 6.0e-76 287.7 174 75.9
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 6.0e-76 287.7 169 75.7
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 6.0e-76 287.7 166 77.1
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 7.9e-76 287.3 167 76.0
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 1.0e-75 287.0 172 77.3
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 1.3e-75 286.6 166 79.5
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 1.3e-75 286.6 167 78.4
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 1.3e-75 286.6 168 76.8
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 1.3e-75 286.6 173 72.8
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 1.8e-75 286.2 168 76.2
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 2.3e-75 285.8 179 73.7
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 3.9e-75 285.0 174 73.6
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 3.9e-75 285.0 168 74.4
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 3.9e-75 285.0 167 77.2
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 3.9e-75 285.0 169 74.6
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 6.7e-75 284.3 159 79.2
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 6.7e-75 284.3 167 75.4
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 8.7e-75 283.9 168 73.2
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 8.7e-75 283.9 173 75.7
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 1.1e-74 283.5 169 74.6
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 1.1e-74 283.5 167 74.9
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 1.9e-74 282.7 162 78.4
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 1.9e-74 282.7 167 75.4
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 1.9e-74 282.7 168 74.4
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 2.5e-74 282.3 167 74.9
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 2.5e-74 282.3 167 75.4
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 3.3e-74 282.0 176 71.6
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 3.3e-74 282.0 168 74.4
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 4.3e-74 281.6 172 73.8
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 4.3e-74 281.6 169 72.8
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 4.3e-74 281.6 169 72.8
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 4.3e-74 281.6 207 63.3
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 7.4e-74 280.8 176 70.5
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 9.6e-74 280.4 167 75.4
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 1.3e-73 280.0 166 74.1
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 1.6e-73 279.6 168 74.4
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 1.6e-73 279.6 163 76.7
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 1.6e-73 279.6 166 75.9
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 2.8e-73 278.9 167 75.4
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 4.8e-73 278.1 168 72.6
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 4.8e-73 278.1 170 71.8
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 4.8e-73 278.1 168 72.0
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 4.8e-73 278.1 169 72.2
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 8.2e-73 277.3 171 71.3
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 1.1e-72 276.9 165 77.6
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 1.8e-72 276.2 169 73.4
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 2.4e-72 275.8 174 70.1
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 3.1e-72 275.4 156 80.1
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 4.1e-72 275.0 167 74.3
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 5.3e-72 274.6 174 71.3
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 9.0e-72 273.9 167 73.7
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 1.2e-71 273.5 174 69.5
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 2.0e-71 272.7 171 71.3
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 2.0e-71 272.7 169 73.4
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 4.5e-71 271.6 174 69.0
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 7.6e-71 270.8 174 69.5
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 1.0e-70 270.4 168 72.6
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 2.9e-70 268.9 174 69.5
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 3.8e-70 268.5 152 78.3
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 3.8e-70 268.5 174 69.0
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 5.0e-70 268.1 173 69.4
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 6.5e-70 267.7 158 75.3
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 6.5e-70 267.7 158 75.3
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 1.1e-69 266.9 170 68.2
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.4e-69 266.5 158 75.3
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 1.9e-69 266.2 176 67.0
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 2.5e-69 265.8 176 67.0
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 3.2e-69 265.4 158 74.7
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 7.2e-69 264.2 168 67.3
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 2.1e-68 262.7 231 55.4
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 3.6e-68 261.9 174 67.2
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 4.6e-68 261.5 175 67.4
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.3e-65 253.4 152 76.3
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 1.3e-65 253.4 163 68.1
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 1.3e-65 253.4 168 64.9
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 2.8e-65 252.3 174 63.8
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 3.7e-65 251.9 168 64.9
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 1.3e-62 243.4 173 67.6
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 8.5e-62 240.7 182 60.4
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 7.2e-61 237.7 168 63.1
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 1.2e-60 236.9 171 62.0
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 6.1e-60 234.6 165 64.2
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 3.0e-59 232.3 176 61.4
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 3.0e-59 232.3 168 66.1
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 5.9e-55 218.0 163 57.1
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 5.9e-55 218.0 174 56.3
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 1.8e-51 206.5 172 52.9
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 2.6e-47 192.6 111 76.6
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.5e-47 192.2 112 74.1
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 3.2e-45 185.7 123 67.5
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 5.5e-45 184.9 113 76.1
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 2.3e-43 179.5 101 79.2
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 2.3e-43 179.5 175 53.1
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 4.0e-43 178.7 102 76.5
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 1.5e-42 176.8 178 46.1
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 1.5e-42 176.8 106 73.6
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 9.7e-42 174.1 102 76.5
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 3.5e-39 165.6 111 67.6
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 5.0e-38 161.8 103 69.9
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 1.9e-37 159.8 110 62.7
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 1.9e-37 159.8 110 62.7
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 5.5e-37 158.3 176 49.4
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 1.6e-36 156.8 85 83.5
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 1.7e-33 146.7 178 48.3
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.2e-26 124.0 72 73.6
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 4.4e-26 122.1 157 35.7
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 1.7e-25 120.2 137 51.8
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 4.9e-25 118.6 123 49.6
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 3.0e-19 99.4 63 68.3
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 4.9e-17 92.0 67 65.7
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 3.5e-15 85.9 186 26.3
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 5.9e-15 85.1 79 51.9
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 3.9e-14 82.4 63 55.6
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 3.6e-12 75.9 66 54.5
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.1e-11 74.3 61 59.0
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 8.9e-11 71.2 35 85.7
vmacro14074 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 1.9e-08 63.5 48 64.6
PGSC0003DMG400005351 Solanum tuberosum HOM05D000190 ORTHO05D030681 5.0e-06 55.5 38 57.9


User provided reference genes

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