Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_006043 Daucus carota HOM05D002419 ORTHO05D008128 4.1e-81 304.7 154 100.0
Gorai.001G129900 Gossypium raimondii HOM05D002419 ORTHO05D008128 1.7e-50 203.0 144 69.4
Thecc.09G260200 Theobroma cacao HOM05D002419 ORTHO05D008128 2.9e-50 202.2 142 69.0
COL.COLO4_32908 Corchorus olitorius HOM05D002419 ORTHO05D008128 6.4e-50 201.1 144 69.4
Duzib170G1173 Durio zibethinus HOM05D002419 ORTHO05D008128 8.3e-50 200.7 144 67.4
Atru.chr3.3691 Acer truncatum HOM05D002419 ORTHO05D008128 1.4e-49 199.9 144 64.6
Gohir.D07G120700 Gossypium hirsutum HOM05D002419 ORTHO05D008128 2.4e-49 199.1 144 68.8
AT5G60335 Arabidopsis thaliana HOM05D002419 ORTHO05D008128 2.7e-48 195.7 146 64.4
Gohir.A07G116300 Gossypium hirsutum HOM05D002419 ORTHO05D008128 3.5e-48 195.3 148 67.6
AL8G36950 Arabidopsis lyrata HOM05D002419 ORTHO05D008128 4.6e-48 194.9 146 65.1
COL.COLO4_25247 Corchorus olitorius HOM05D002419 ORTHO05D008128 4.6e-48 194.9 144 69.4
Carub.0008s2104 Capsella rubella HOM05D002419 ORTHO05D008128 1.0e-47 193.7 146 63.7
Cpa.g.sc139.69 Carica papaya HOM05D002419 ORTHO05D008128 2.3e-47 192.6 139 65.5
Sabra06G0105100 Salix brachista HOM05D002419 ORTHO05D008128 5.0e-47 191.4 148 62.8
Potri.006G133800 Populus trichocarpa HOM05D002419 ORTHO05D008128 8.6e-47 190.7 148 61.5
Lj2A1017T34 Lonicera japonica HOM05D002419 ORTHO05D008128 1.1e-46 190.3 140 65.0
THA.LOC104814842 Tarenaya hassleriana HOM05D002419 ORTHO05D008128 1.1e-46 190.3 146 63.7
Manes.11G141200 Manihot esculenta HOM05D002419 ORTHO05D008128 1.5e-46 189.9 136 67.6
Prupe.6G094800 Prunus persica HOM05D002419 ORTHO05D008128 1.5e-46 189.9 137 67.9
MD11G1129900 Malus domestica HOM05D002419 ORTHO05D008128 2.5e-46 189.1 139 66.9
TWI75G1733 Tripterygium wilfordii HOM05D002419 ORTHO05D008128 2.5e-46 189.1 140 62.9
GSVIVG01025134001 Vitis vinifera HOM05D002419 ORTHO05D008128 2.5e-46 189.1 141 65.2
RcHm_v2.0_Chr5g0060661 Rosa chinensis HOM05D002419 ORTHO05D008128 4.3e-46 188.3 140 63.6
Psat2g021880 Pisum sativum HOM05D002419 ORTHO05D008128 5.6e-46 188.0 148 60.8
PGR102G0399 Punica granatum HOM05D002419 ORTHO05D008128 1.2e-45 186.8 141 66.0
Dinv29347 Davidia involucrata HOM05D002419 ORTHO05D008128 1.6e-45 186.4 141 63.8
CAN.G2109.1 Capsicum annuum HOM05D002419 ORTHO05D008128 2.1e-45 186.0 142 63.4
Ca_06160_v3 Cicer arietinum L. HOM05D002419 ORTHO05D008128 2.8e-45 185.7 140 62.1
Thhalv10014838m.g Eutrema salsugineum HOM05D002419 ORTHO05D008128 2.8e-45 185.7 139 61.9
TPR.G11328 Trifolium pratense HOM05D002419 ORTHO05D008128 2.8e-45 185.7 145 58.6
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 3.6e-45 185.3 139 63.3
CSS0035547 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D008128 3.6e-45 185.3 140 60.7
Rhsim01G0213200 Rhododendron simsii HOM05D002419 ORTHO05D008128 3.6e-45 185.3 145 62.1
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 4.7e-45 184.9 139 63.3
BraA03t10435Z Brassica rapa HOM05D002419 ORTHO05D008128 4.7e-45 184.9 139 61.9
CARHR274000 Cardamine hirsuta HOM05D002419 ORTHO05D008128 6.2e-45 184.5 139 61.9
CiPaw.13G107000 Carya illinoinensis HOM05D002419 ORTHO05D008128 6.2e-45 184.5 140 60.7
FAN25G2109 Fragaria x ananassa HOM05D002419 ORTHO05D008128 6.2e-45 184.5 140 65.0
Glyma.14G041000 Glycine max HOM05D002419 ORTHO05D008128 8.1e-45 184.1 140 61.4
Sabra03G0090700 Salix brachista HOM05D002419 ORTHO05D008128 8.1e-45 184.1 148 61.5
BcaC04g19693 Brassica carinata HOM05D002419 ORTHO05D008128 1.1e-44 183.7 139 61.9
Rhsim01G0213400 Rhododendron simsii HOM05D002419 ORTHO05D008128 1.4e-44 183.3 147 61.9
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 1.8e-44 183.0 139 61.9
Cfa011364 Carpinus fangiana HOM05D005177 ORTHO05D006175 1.8e-44 183.0 140 60.7
FAN16G1578 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.3e-44 182.6 140 64.3
BcaB08g36333 Brassica carinata HOM05D002419 ORTHO05D008128 3.1e-44 182.2 139 61.2
Haze_23915 Corylus avellana HOM05D002419 ORTHO05D008128 5.2e-44 181.4 140 60.0
QL01p037215 Quercus lobata HOM05D002419 ORTHO05D008128 5.2e-44 181.4 140 61.4
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 6.8e-44 181.0 139 61.9
TAR633G0359 Trochodendron aralioides HOM05D002419 ORTHO05D008128 6.8e-44 181.0 145 60.0
vmacro14413 Vaccinium macrocarpon HOM05D002419 ORTHO05D008128 6.8e-44 181.0 141 63.1
arahy.Tifrunner.gnm1.ann1.AUHN72 Arachis hypogaea HOM05D002419 ORTHO05D008128 8.9e-44 180.6 149 58.4
Solyc06g075000.3 Solanum lycopersicum HOM05D002419 ORTHO05D008128 8.9e-44 180.6 142 60.6
Sopen06g031430 Solanum pennellii HOM05D002419 ORTHO05D008128 8.9e-44 180.6 142 60.6
Medtr5g087960 Medicago truncatula HOM05D002419 ORTHO05D008128 1.2e-43 180.3 140 59.3
A03p11220 Brassica napus HOM05D002419 ORTHO05D008128 1.5e-43 179.9 139 59.7
Psat2g022480 Pisum sativum HOM05D002419 ORTHO05D008128 1.5e-43 179.9 148 59.5
Sp6g21940 Schrenkiella parvula HOM05D002419 ORTHO05D008128 1.5e-43 179.9 139 61.2
PGSC0003DMG400012002 Solanum tuberosum HOM05D002419 ORTHO05D008128 1.5e-43 179.9 142 60.6
Actinidia03711 Actinidia chinensis HOM05D002419 ORTHO05D008128 2.0e-43 179.5 144 60.4
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 2.0e-43 179.5 139 60.4
Nitab4.5_0000106g0340 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.0e-43 179.5 142 60.6
ECA248G1487 Erigeron canadensis HOM05D002419 ORTHO05D008128 2.6e-43 179.1 145 59.3
Sc15g0001550 Simmondsia chinensis HOM05D002419 ORTHO05D008128 2.6e-43 179.1 138 61.6
Glyma.02G275000 Glycine max HOM05D002419 ORTHO05D008128 4.4e-43 178.3 140 60.7
CANSAT54G1052 Cannabis sativa HOM05D002419 ORTHO05D008128 7.5e-43 177.6 140 56.4
PSO339G2915 Papaver somniferum HOM05D002419 ORTHO05D008128 9.8e-43 177.2 140 60.7
Lsat_1_v5_gn_1_63680 Lactuca sativa HOM05D002419 ORTHO05D008128 1.3e-42 176.8 143 58.7
Peaxi162Scf00029g01714 Petunia axillaris HOM05D002419 ORTHO05D008128 1.3e-42 176.8 142 59.2
Lalb_Chr25g0283021 Lupinus albus HOM05D002419 ORTHO05D008128 6.4e-42 174.5 140 57.1
Phvul.008G206400 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 8.3e-42 174.1 153 56.2
Aqoxy6G01314 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 1.1e-41 173.7 144 58.3
TPR.G11332 Trifolium pratense HOM05D002419 ORTHO05D008128 1.4e-41 173.3 148 57.4
Cc01_g10710 Coffea canephora HOM05D002419 ORTHO05D008128 2.4e-41 172.6 142 58.5
CsaV3_6G021630 Cucumis sativus L. HOM05D002419 ORTHO05D008128 2.4e-41 172.6 144 59.7
VMungo0647G2488 Vigna mungo HOM05D002419 ORTHO05D008128 3.2e-41 172.2 141 56.0
Phvul.008G172000 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 4.1e-41 171.8 147 55.1
AUR62027574 Chenopodium quinoa HOM05D002419 ORTHO05D008128 5.4e-41 171.4 136 61.8
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 9.2e-41 170.6 139 59.0
MBI04_g27072_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D008128 1.2e-40 170.2 154 57.8
PSO801G0184 Papaver somniferum HOM05D002419 ORTHO05D008128 1.6e-40 169.9 140 58.6
arahy.Tifrunner.gnm1.ann1.2RF374 Arachis hypogaea HOM05D002419 ORTHO05D008128 6.0e-40 167.9 145 53.1
SalBow7G0817 Salvia bowleyana HOM05D002419 ORTHO05D008128 6.0e-40 167.9 144 56.2
LjContig00564g0025850 Lotus japonicus HOM05D002419 ORTHO05D008128 1.0e-39 167.2 148 53.4
Oeu009377.1 Olea europaea HOM05D002419 ORTHO05D008128 1.0e-39 167.2 144 56.9
Oeu049265.1 Olea europaea HOM05D002419 ORTHO05D008128 1.0e-39 167.2 144 57.6
ATR0680G185 Amborella trichopoda HOM05D002419 ORTHO05D008128 1.3e-39 166.8 134 58.2
EL10Ac8g19852 Beta vulgaris HOM05D002419 ORTHO05D008128 3.9e-39 165.2 147 55.8
TAR636G2038 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.1e-38 163.7 141 56.7
Hund27375 Selenicereus undatus HOM05D002419 ORTHO05D008128 1.9e-38 162.9 139 56.8
TAR636G3373 Trochodendron aralioides HOM05D002419 ORTHO05D008128 1.9e-38 162.9 146 56.2
Aqoxy2G01471 Aquilegia oxysepala HOM05D002419 ORTHO05D008128 2.5e-38 162.5 144 55.6
SHI33804 Sapria himalayana HOM05D002419 ORTHO05D008128 2.5e-38 162.5 133 57.9
HanXRQChr01g0019131 Helianthus annuus HOM05D002419 ORTHO05D008128 4.3e-38 161.8 144 55.6
ClCG02G020940 Citrullus lanatus HOM05D002419 ORTHO05D008128 5.6e-38 161.4 136 57.4
CDE09G0261 Ceratophyllum demersum HOM05D007330 ORTHO05D008128 3.1e-36 155.6 136 55.9
Eucgr.B02468 Eucalyptus grandis HOM05D002419 ORTHO05D008128 2.0e-35 152.9 160 49.4
Migut.N02582 Erythranthe guttata HOM05D002419 ORTHO05D008128 7.6e-35 151.0 142 50.7
Lj2A891T18 Lonicera japonica HOM05D002419 ORTHO05D008128 9.9e-35 150.6 114 63.2
SEGI_36576 Sequoiadendron giganteum HOM05D002419 ORTHO05D008128 1.3e-34 150.2 151 46.4
Nitab4.5_0000511g0130 Nicotiana tabacum HOM05D002419 ORTHO05D008128 2.2e-34 149.4 106 66.0
Oeu049264.1 Olea europaea HOM05D002419 ORTHO05D008128 6.4e-34 147.9 135 53.3
unitig_699.g19262 Utricularia gibba HOM05D001486 ORTHO05D003845 5.4e-33 144.8 135 52.6
HPP92_005092 Vanilla planifolia HOM05D002419 ORTHO05D008128 3.5e-32 142.1 150 51.3
Zm00001eb211510 Zea mays HOM05D002419 ORTHO05D008128 4.6e-32 141.7 156 48.1
SGA_v2.0_scaffold25G11093 Striga asiatica HOM05D002419 ORTHO05D008128 3.0e-31 139.0 142 51.4
Ah.01g024490 Amaranthus hybridus HOM05D002419 ORTHO05D008128 5.1e-31 138.3 122 57.4
FAN11G3570 Fragaria x ananassa HOM05D002273 ORTHO05D008128 8.6e-31 137.5 99 64.6
FvH4_3g33270 Fragaria vesca HOM05D002273 ORTHO05D008128 1.1e-30 137.1 97 64.9
FAN21G3525 Fragaria x ananassa HOM05D002419 ORTHO05D008128 2.5e-30 136.0 98 65.3
Phvul.008G171900 Phaseolus vulgaris HOM05D002419 ORTHO05D008128 4.3e-30 135.2 147 46.9
SMO356G0194 Selaginella moellendorffii HOM05D002419 ORTHO05D008128 2.6e-27 125.9 138 45.7
Pp3c27_1710 Physcomitrium patens HOM05D002419 ORTHO05D008128 2.9e-26 122.5 131 41.2
CBR_g17117 Chara braunii HOM05D002419 ORTHO05D008128 1.9e-25 119.8 131 44.3
Mapoly0013s0067 Marchantia polymorpha HOM05D002419 ORTHO05D008128 1.9e-25 119.8 143 41.3
MSTRG.17782 Avicennia marina HOM05D002419 ORTHO05D008128 3.5e-24 115.5 116 49.1
Zm00001eb088630 Zea mays HOM05D002419 ORTHO05D008128 7.8e-24 114.4 107 53.3
AUR62035785 Chenopodium quinoa HOM05D002419 ORTHO05D008128 5.1e-23 111.7 76 68.4
AagrBONN_evm.TU.Sc2ySwM_228.5883 Anthoceros agrestis HOM05D002419 ORTHO05D008128 9.9e-19 97.4 137 39.4
AagrBONN_evm.TU.Sc2ySwM_228.5888 Anthoceros agrestis HOM05D002419 ORTHO05D008128 3.2e-17 92.4 139 38.1
Sed0027804 Sechium edule HOM05D002419 ORTHO05D008128 1.2e-16 90.5 137 36.5
BcaB01g04653 Brassica carinata HOM05D002419 ORTHO05D008128 1.6e-16 90.1 75 60.0
MELO3C025746.2 Cucumis melo HOM05D002419 ORTHO05D008128 3.5e-16 89.0 72 61.1
BcaB01g04652 Brassica carinata HOM05D000125 ORTHO05D008128 6.0e-16 88.2 73 53.4
CARHR181070 Cardamine hirsuta HOM05D002419 ORTHO05D008128 1.1e-14 84.0 64 59.4
Cre12.g560100 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D008128 4.3e-14 82.0 92 43.5
MD11G1130200 Malus domestica HOM05D005177 ORTHO05D008128 1.8e-12 76.6 71 54.9
PRCOL_00002156 Prasinoderma coloniale HOM05D002419 ORTHO05D008128 4.0e-12 75.5 133 37.6
MCO16G180 Micromonas commoda HOM05D002419 ORTHO05D008128 5.8e-11 71.6 76 43.4
Actinidia20438 Actinidia chinensis HOM05D002419 ORTHO05D008128 1.8e-07 60.1 51 52.9
Ciclev10029934m.g Citrus clementina HOM05D002419 ORTHO05D008128 2.3e-07 59.7 41 51.2


User provided reference genes

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