Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 6.1e-233 810.4 413 100.0
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 2.3e-139 499.6 414 60.1
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 4.0e-139 498.8 414 60.4
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 8.3e-137 491.1 413 60.5
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 7.0e-136 488.0 415 61.2
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 1.0e-134 484.2 413 61.3
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 1.3e-134 483.8 414 62.3
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 7.2e-133 478.0 414 61.8
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.5e-130 470.3 407 59.5
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 3.4e-130 469.2 403 59.8
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 5.7e-130 468.4 413 61.5
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 1.7e-129 466.8 414 60.1
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 2.8e-129 466.1 418 60.8
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 3.7e-129 465.7 413 59.6
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 3.7e-129 465.7 413 59.1
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 8.3e-129 464.5 413 59.1
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 1.1e-128 464.2 414 59.9
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.4e-128 463.0 402 59.7
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 5.4e-128 461.8 414 58.9
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 9.2e-128 461.1 414 58.2
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 1.6e-127 460.3 415 58.3
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 2.0e-127 459.9 417 58.5
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 3.5e-127 459.1 408 59.6
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 4.5e-127 458.8 414 60.1
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 1.7e-126 456.8 414 58.7
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 5.0e-126 455.3 418 58.4
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 8.6e-126 454.5 413 58.8
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.1e-125 454.1 428 57.5
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 2.5e-125 453.0 408 58.8
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 4.3e-125 452.2 411 57.9
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 4.3e-125 452.2 394 60.7
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 9.5e-125 451.1 420 58.3
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 1.2e-124 450.7 347 62.2
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 1.6e-124 450.3 416 59.1
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 2.8e-124 449.5 393 58.5
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 2.8e-124 449.5 347 62.0
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 4.7e-124 448.7 415 56.9
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 6.1e-124 448.4 418 57.7
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 6.1e-124 448.4 424 55.7
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 1.0e-123 447.6 410 57.1
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 1.0e-123 447.6 411 57.7
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 1.4e-123 447.2 418 59.3
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 1.8e-123 446.8 347 61.1
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 2.3e-123 446.4 404 58.9
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 2.3e-123 446.4 404 58.9
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 2.3e-123 446.4 404 58.9
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 2.3e-123 446.4 401 59.1
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 2.3e-123 446.4 394 59.4
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 4.0e-123 445.7 404 54.7
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 5.2e-123 445.3 404 58.9
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 8.9e-123 444.5 416 58.4
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 8.9e-123 444.5 396 57.3
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 8.9e-123 444.5 322 68.9
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 8.9e-123 444.5 414 58.9
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 8.9e-123 444.5 346 63.6
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 1.5e-122 443.7 411 56.4
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 1.5e-122 443.7 394 59.6
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 2.0e-122 443.4 411 56.7
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 3.4e-122 442.6 413 55.4
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 4.4e-122 442.2 414 57.0
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 5.7e-122 441.8 407 56.0
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 1.7e-121 440.3 411 56.4
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 1.8e-120 436.8 419 57.8
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 5.4e-120 435.3 408 57.1
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 9.2e-120 434.5 418 57.7
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 9.2e-120 434.5 416 55.5
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 1.0e-118 431.0 412 57.8
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 3.0e-118 429.5 416 55.0
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 3.9e-118 429.1 416 54.6
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 5.0e-118 428.7 411 56.4
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 5.0e-118 428.7 377 61.0
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 8.6e-118 427.9 330 60.9
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.5e-117 427.2 380 57.9
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.5e-117 427.2 318 68.2
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 2.5e-117 426.4 288 68.4
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 7.3e-117 424.9 414 55.1
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 7.3e-117 424.9 335 65.7
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 8.0e-116 421.4 434 52.8
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 1.0e-115 421.0 414 55.3
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 1.0e-115 421.0 325 63.7
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 3.1e-115 419.5 271 70.5
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 4.4e-114 415.6 414 53.4
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 2.7e-111 406.4 242 76.9
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 4.3e-109 399.1 344 57.3
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 5.8e-106 388.7 319 62.7
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 1.3e-105 387.5 399 51.9
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.6e-103 380.6 316 56.3
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 6.6e-102 375.2 414 50.0
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 8.1e-100 368.2 245 69.4
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 3.1e-99 366.3 215 79.1
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 5.4e-96 355.5 380 51.6
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 2.7e-95 353.2 355 53.2
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.7e-94 350.5 343 57.1
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 2.3e-94 350.1 319 58.9
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 4.6e-87 325.9 413 46.5
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 1.3e-65 254.6 414 39.4
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 2.1e-63 247.3 150 72.7
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.0e-62 245.0 413 40.0
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 2.2e-52 210.7 300 37.7
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 2.9e-49 200.3 294 38.1
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 3.9e-46 189.9 131 66.4
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 3.9e-46 189.9 131 66.4
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 1.3e-44 184.9 292 37.7
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 8.5e-41 172.2 272 37.5
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 1.1e-40 171.8 177 52.5
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 5.2e-38 162.9 119 65.5
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 1.5e-37 161.4 231 47.2
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 4.1e-35 153.3 97 78.4
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 2.6e-34 150.6 158 48.1
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 1.3e-33 148.3 139 55.4
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 5.0e-25 119.8 246 30.5
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 3.7e-20 103.6 117 44.4
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 1.4e-19 101.7 256 29.3
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 7.0e-11 72.8 94 44.7
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 9.2e-11 72.4 92 45.7
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.3e-09 68.6 219 28.3


User provided reference genes

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