Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005928 Daucus carota HOM05D001128 ORTHO05D000721 2.5e-113 412.1 209 100.0
DCAR_007415 Daucus carota HOM05D001128 ORTHO05D000721 6.9e-23 111.7 215 37.7
Atru.chr3.4033 Acer truncatum HOM05D001128 ORTHO05D000721 8.4e-13 78.2 213 31.0
Migut.J00260 Erythranthe guttata HOM05D001128 ORTHO05D000721 8.4e-13 78.2 114 47.4
SalBow6G5821 Salvia bowleyana HOM05D001128 ORTHO05D000721 3.2e-12 76.3 250 30.8
DCAR_018932 Daucus carota HOM05D001128 ORTHO05D000721 7.1e-12 75.1 152 41.4
Gorai.009G095300 Gossypium raimondii HOM05D001128 ORTHO05D000721 7.1e-12 75.1 236 32.6
Gohir.A05G091900 Gossypium hirsutum HOM05D001128 ORTHO05D000721 9.3e-12 74.7 121 42.1
Gohir.D05G092700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 9.3e-12 74.7 235 32.8
ECA236G1683 Erigeron canadensis HOM05D001128 ORTHO05D000721 2.7e-11 73.2 154 37.7
Dinv43012 Davidia involucrata HOM05D001128 ORTHO05D000721 3.5e-11 72.8 316 29.4
Dinv43085 Davidia involucrata HOM05D001128 ORTHO05D000721 3.5e-11 72.8 316 29.4
MSTRG.17824 Avicennia marina HOM05D001128 ORTHO05D000721 4.6e-11 72.4 275 28.7
Actinidia12878 Actinidia chinensis HOM05D001128 ORTHO05D000721 7.9e-11 71.6 112 41.1
CSS0027233 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.0e-10 71.2 120 38.3
Duzib170G1159 Durio zibethinus HOM05D001128 ORTHO05D000721 1.3e-10 70.9 119 40.3
Lsat_1_v5_gn_5_168381 Lactuca sativa HOM05D001128 ORTHO05D000721 1.3e-10 70.9 281 27.0
Rhsim13G0075900 Rhododendron simsii HOM05D001128 ORTHO05D000721 1.3e-10 70.9 289 29.4
TWI77G0372 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 1.3e-10 70.9 131 38.9
Cc01_g13540 Coffea canephora HOM05D001128 ORTHO05D000721 1.8e-10 70.5 167 37.1
Glyma.15G034900 Glycine max HOM05D001128 ORTHO05D000721 3.0e-10 69.7 205 31.2
TWI75G1051 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 3.0e-10 69.7 269 31.2
Medtr2g097800 Medicago truncatula HOM05D001128 ORTHO05D000721 3.9e-10 69.3 142 38.7
unitig_746.g26718 Utricularia gibba HOM05D001128 ORTHO05D000721 6.7e-10 68.6 209 34.4
Lsat_1_v5_gn_8_72501 Lactuca sativa HOM05D001128 ORTHO05D000721 8.7e-10 68.2 148 37.2
Thecc.09G311600 Theobroma cacao HOM05D001128 ORTHO05D000721 8.7e-10 68.2 173 33.5
GSVIVG01016431001 Vitis vinifera HOM05D001128 ORTHO05D000721 8.7e-10 68.2 119 42.0
CSS0032417 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 1.1e-09 67.8 127 40.2
CiPaw.13G086900 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.1e-09 67.8 121 36.4
Dinv17068 Davidia involucrata HOM05D001128 ORTHO05D000721 1.1e-09 67.8 322 28.3
MD03G1082700 Malus domestica HOM05D001128 ORTHO05D000721 1.1e-09 67.8 117 38.5
PGSC0003DMG400030336 Solanum tuberosum HOM05D001128 ORTHO05D000721 1.1e-09 67.8 169 34.3
Eucgr.J01995 Eucalyptus grandis HOM05D001128 ORTHO05D000721 1.5e-09 67.4 119 38.7
Gohir.A03G046700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.5e-09 67.4 171 34.5
Oeu001830.1 Olea europaea HOM05D001128 ORTHO05D000721 1.5e-09 67.4 128 39.1
vmacro03017 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 1.5e-09 67.4 309 28.5
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 1.9e-09 67.0 115 41.7
HanXRQChr08g0212731 Helianthus annuus HOM05D001128 ORTHO05D000721 2.5e-09 66.6 285 28.8
TWI79G1361 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 2.5e-09 66.6 194 34.5
Gorai.003G127200 Gossypium raimondii HOM05D001128 ORTHO05D000721 3.3e-09 66.2 171 33.3
Potri.009G038600 Populus trichocarpa HOM05D001128 ORTHO05D000721 3.3e-09 66.2 189 31.7
Duzib168G0052 Durio zibethinus HOM05D001128 ORTHO05D000721 4.3e-09 65.9 202 31.2
Psat5g286040 Pisum sativum HOM05D001128 ORTHO05D000721 4.3e-09 65.9 144 34.7
TWI74G1371 Tripterygium wilfordii HOM05D001128 ORTHO05D000721 4.3e-09 65.9 132 37.9
MSTRG.10240 Avicennia marina HOM05D001128 ORTHO05D000721 5.7e-09 65.5 121 40.5
CAN.G394.85 Capsicum annuum HOM05D001128 ORTHO05D000721 5.7e-09 65.5 149 35.6
Duzib114G0703 Durio zibethinus HOM05D001128 ORTHO05D000721 5.7e-09 65.5 116 42.2
MD11G1090800 Malus domestica HOM05D001128 ORTHO05D000721 5.7e-09 65.5 121 38.0
Sabra08G0045800 Salix brachista HOM05D001128 ORTHO05D000721 5.7e-09 65.5 124 36.3
Peaxi162Scf00481g00624 Petunia axillaris HOM05D001128 ORTHO05D000721 7.4e-09 65.1 166 32.5
arahy.Tifrunner.gnm1.ann1.BMML80 Arachis hypogaea HOM05D001128 ORTHO05D000721 9.7e-09 64.7 121 37.2
Cpa.g.sc56.66 Carica papaya HOM05D001128 ORTHO05D000721 9.7e-09 64.7 127 40.2
Potri.010G195800 Populus trichocarpa HOM05D001128 ORTHO05D000721 9.7e-09 64.7 124 37.9
SalBow1G2079 Salvia bowleyana HOM05D001128 ORTHO05D000721 1.3e-08 64.3 116 40.5
TAR623G0478 Trochodendron aralioides HOM05D001128 ORTHO05D000721 1.3e-08 64.3 148 37.8
Oeu018335.1 Olea europaea HOM05D001128 ORTHO05D000721 1.6e-08 63.9 122 40.2
TAR369G0849 Trochodendron aralioides HOM05D001128 ORTHO05D000721 1.6e-08 63.9 166 36.1
MSTRG.12657 Avicennia marina HOM05D001128 ORTHO05D000721 2.2e-08 63.5 260 30.4
Manes.02G125700 Manihot esculenta HOM05D001128 ORTHO05D000721 2.2e-08 63.5 157 35.7
Hma1.2p1_0671F.1_g200660 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 2.8e-08 63.2 118 39.8
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 2.8e-08 63.2 119 37.0
Manes.01G167300 Manihot esculenta HOM05D001128 ORTHO05D000721 3.7e-08 62.8 118 38.1
MSTRG.19049 Avicennia marina HOM05D001128 ORTHO05D000721 4.8e-08 62.4 149 34.9
Nitab4.5_0009885g0020 Nicotiana tabacum HOM05D001128 ORTHO05D000721 4.8e-08 62.4 167 33.5
PSO384G2375 Papaver somniferum HOM05D001128 ORTHO05D000721 4.8e-08 62.4 116 37.1
Atru.chr8.2106 Acer truncatum HOM05D001128 ORTHO05D000721 6.3e-08 62.0 126 34.9
Lalb_Chr14g0372071 Lupinus albus HOM05D001128 ORTHO05D000721 6.3e-08 62.0 208 27.4
Manes.09G099100 Manihot esculenta HOM05D001128 ORTHO05D000721 6.3e-08 62.0 152 34.9
Nn2g13535 Nelumbo nucifera HOM05D001128 ORTHO05D000721 6.3e-08 62.0 176 35.2
Sabra06G0070700 Salix brachista HOM05D001128 ORTHO05D000721 6.3e-08 62.0 127 38.6
TPR.G6832 Trifolium pratense HOM05D001128 ORTHO05D000721 6.3e-08 62.0 187 31.0
CiPaw.09G202700 Carya illinoinensis HOM05D001128 ORTHO05D000721 8.2e-08 61.6 126 37.3
Ciclev10029021m.g Citrus clementina HOM05D001128 ORTHO05D000721 8.2e-08 61.6 255 29.8
Nitab4.5_0000008g0230 Nicotiana tabacum HOM05D001128 ORTHO05D000721 8.2e-08 61.6 120 39.2
Peaxi162Scf00009g03319 Petunia axillaris HOM05D001128 ORTHO05D000721 8.2e-08 61.6 119 40.3
Sopen06g032900 Solanum pennellii HOM05D001128 ORTHO05D000721 8.2e-08 61.6 122 36.9
Thecc.05G027900 Theobroma cacao HOM05D001128 ORTHO05D000721 8.2e-08 61.6 125 37.6
MSTRG.5621 Avicennia marina HOM05D001128 ORTHO05D000721 1.1e-07 61.2 118 39.0
Haze_24208 Corylus avellana HOM05D001128 ORTHO05D000721 1.1e-07 61.2 128 39.1
Duzib093G0147 Durio zibethinus HOM05D001128 ORTHO05D000721 1.1e-07 61.2 120 40.0
Migut.N00909 Erythranthe guttata HOM05D001128 ORTHO05D000721 1.1e-07 61.2 264 28.0
Gohir.D03G120500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 1.4e-07 60.8 171 32.2
TAR633G0212 Trochodendron aralioides HOM05D001128 ORTHO05D000721 1.4e-07 60.8 118 38.1
VMungo1080G0292 Vigna mungo HOM05D001128 ORTHO05D000721 1.4e-07 60.8 189 29.6
Actinidia13814 Actinidia chinensis HOM05D001128 ORTHO05D000721 1.8e-07 60.5 128 35.9
MBI14_g02856_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 1.8e-07 60.5 169 34.3
PSO339G4622 Papaver somniferum HOM05D001128 ORTHO05D000721 1.8e-07 60.5 162 33.3
Actinidia29161 Actinidia chinensis HOM05D001128 ORTHO05D000721 2.4e-07 60.1 124 37.1
arahy.Tifrunner.gnm1.ann1.E0Q1QR Arachis hypogaea HOM05D001128 ORTHO05D000721 2.4e-07 60.1 118 35.6
Cpa.g.sc19.247 Carica papaya HOM05D001128 ORTHO05D000721 2.4e-07 60.1 121 38.0
Nitab4.5_0002823g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 2.4e-07 60.1 142 38.7
SalBow2G1629 Salvia bowleyana HOM05D001128 ORTHO05D000721 2.4e-07 60.1 260 27.3
PGSC0003DMG400019191 Solanum tuberosum HOM05D001128 ORTHO05D000721 2.4e-07 60.1 131 37.4
TPR.G13630 Trifolium pratense HOM05D001128 ORTHO05D000721 2.4e-07 60.1 128 35.9
Carub.0008s1989 Capsella rubella HOM05D009319 ORTHO05D000721 3.1e-07 59.7 178 30.3
Lj3C959G13 Lonicera japonica HOM05D001128 ORTHO05D000721 3.1e-07 59.7 123 39.0
Lalb_Chr24g0397131 Lupinus albus HOM05D001128 ORTHO05D000721 3.1e-07 59.7 205 30.7
Nitab4.5_0003264g0030 Nicotiana tabacum HOM05D001128 ORTHO05D000721 3.1e-07 59.7 120 40.0
TAR636G2726 Trochodendron aralioides HOM05D001128 ORTHO05D000721 3.1e-07 59.7 134 37.3
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 3.1e-07 59.7 125 34.4
Aqoxy1G00786 Aquilegia oxysepala HOM05D001128 ORTHO05D000721 4.1e-07 59.3 116 37.9
CiPaw.10G150200 Carya illinoinensis HOM05D001128 ORTHO05D000721 4.1e-07 59.3 125 36.0
CsaV3_4G025740 Cucumis sativus L. HOM05D001128 ORTHO05D000721 4.1e-07 59.3 126 36.5
Oeu013161.1 Olea europaea HOM05D001128 ORTHO05D000721 4.1e-07 59.3 121 38.8
PGR119G0644 Punica granatum HOM05D001128 ORTHO05D000721 4.1e-07 59.3 110 40.0
Sabra09G0027500 Salix brachista HOM05D001128 ORTHO05D000721 4.1e-07 59.3 146 31.5
Lj3g0022973 Lotus japonicus HOM05D001128 ORTHO05D000721 5.3e-07 58.9 226 30.5
Manes.10G020800 Manihot esculenta HOM05D001128 ORTHO05D000721 5.3e-07 58.9 121 34.7
Peaxi162Scf00014g01511 Petunia axillaris HOM05D001128 ORTHO05D000721 5.3e-07 58.9 246 31.7
Solyc06g076490.3 Solanum lycopersicum HOM05D001128 ORTHO05D000721 5.3e-07 58.9 123 37.4
BraA10t43727Z Brassica rapa HOM05D009319 ORTHO05D000721 6.9e-07 58.5 177 31.1
CSS0004370 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 6.9e-07 58.5 111 39.6
ClCG04G007510 Citrullus lanatus HOM05D001128 ORTHO05D000721 6.9e-07 58.5 129 36.4
Ciclev10011799m.g Citrus clementina HOM05D001128 ORTHO05D000721 6.9e-07 58.5 121 35.5
Glyma.13G339500 Glycine max HOM05D001128 ORTHO05D000721 6.9e-07 58.5 200 30.5
A10p16430 Brassica napus HOM05D009319 ORTHO05D000721 9.0e-07 58.2 177 31.1
CANSAT35G1304 Cannabis sativa HOM05D001128 ORTHO05D000721 9.0e-07 58.2 129 38.0
Dinv37107 Davidia involucrata HOM05D001128 ORTHO05D000721 9.0e-07 58.2 124 37.1
Duzib128G0075 Durio zibethinus HOM05D001128 ORTHO05D000721 9.0e-07 58.2 228 28.9
Lsat_1_v5_gn_9_31700 Lactuca sativa HOM05D001128 ORTHO05D000721 9.0e-07 58.2 114 40.4
Nitab4.5_0000652g0060 Nicotiana tabacum HOM05D001128 ORTHO05D000721 9.0e-07 58.2 154 36.4
Gorai.006G178800 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.2e-06 57.8 194 29.4
SGA_v2.0_scaffold199G41168 Striga asiatica HOM05D001128 ORTHO05D000721 1.2e-06 57.8 271 28.0
C09p51480 Brassica napus HOM05D009319 ORTHO05D000721 1.5e-06 57.4 177 31.6
BolC9t58007H Brassica oleracea HOM05D009319 ORTHO05D000721 1.5e-06 57.4 177 31.6
Oeu007672.1 Olea europaea HOM05D001128 ORTHO05D000721 2.0e-06 57.0 225 31.6
VMungo1127G1603 Vigna mungo HOM05D001128 ORTHO05D000721 2.0e-06 57.0 110 34.5
GSVIVG01034054001 Vitis vinifera HOM05D001128 ORTHO05D000721 2.0e-06 57.0 124 36.3
ATR0210G013 Amborella trichopoda HOM05D001128 ORTHO05D000721 2.6e-06 56.6 121 35.5
Thhalv10014238m.g Eutrema salsugineum HOM05D009319 ORTHO05D000721 2.6e-06 56.6 113 36.3
Gohir.A09G161600 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.6e-06 56.6 124 36.3
Cfa011590 Carpinus fangiana HOM05D001128 ORTHO05D000721 3.4e-06 56.2 126 35.7
Ca_05146_v3 Cicer arietinum L. HOM05D001128 ORTHO05D000721 3.4e-06 56.2 127 34.6
MELO3C009213.2 Cucumis melo HOM05D001128 ORTHO05D000721 3.4e-06 56.2 121 37.2
MBI05_g02674_MAGBIO Magnolia biondii HOM05D001128 ORTHO05D000721 3.4e-06 56.2 134 33.6
Potri.016G105000 Populus trichocarpa HOM05D001128 ORTHO05D000721 3.4e-06 56.2 123 36.6
THA.LOC104810743 Tarenaya hassleriana HOM05D009319 ORTHO05D000721 3.4e-06 56.2 202 28.7
BcaC04g19808 Brassica carinata HOM05D009319 ORTHO05D000721 4.5e-06 55.8 171 31.6
Nitab4.5_0000744g0010 Nicotiana tabacum HOM05D001128 ORTHO05D000721 4.5e-06 55.8 183 30.6
Prupe.6G067000 Prunus persica HOM05D001128 ORTHO05D000721 4.5e-06 55.8 232 29.3
Hund16030 Selenicereus undatus HOM05D001128 ORTHO05D000721 4.5e-06 55.8 156 32.1
vmacro20201 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 4.5e-06 55.8 127 33.1
Medtr4g064947 Medicago truncatula HOM05D001128 ORTHO05D000721 5.9e-06 55.5 122 33.6
Peaxi162Scf00132g00911 Petunia axillaris HOM05D001128 ORTHO05D000721 5.9e-06 55.5 113 38.9
Prupe.6G265300 Prunus persica HOM05D001128 ORTHO05D000721 5.9e-06 55.5 131 37.4
Rhsim03G0138400 Rhododendron simsii HOM05D001128 ORTHO05D000721 5.9e-06 55.5 129 36.4
SMO171G0071 Selaginella moellendorffii HOM05D001128 ORTHO05D000721 5.9e-06 55.5 127 33.1
SMO353G0321 Selaginella moellendorffii HOM05D001128 ORTHO05D000721 5.9e-06 55.5 127 33.1
AUR62022804 Chenopodium quinoa HOM05D001128 ORTHO05D000721 7.7e-06 55.1 122 33.6
COL.COLO4_14683 Corchorus olitorius HOM05D001128 ORTHO05D000721 7.7e-06 55.1 119 37.8
Gohir.D09G157200 Gossypium hirsutum HOM05D001128 ORTHO05D000721 7.7e-06 55.1 195 28.2
Nn2g11296 Nelumbo nucifera HOM05D001128 ORTHO05D000721 7.7e-06 55.1 217 28.1
AT5G59050 Arabidopsis thaliana HOM05D009319 ORTHO05D000721 1.0e-05 54.7 183 28.4
CDE02G1727 Ceratophyllum demersum HOM05D001128 ORTHO05D000721 1.0e-05 54.7 116 36.2
Hma1.2p1_1521F.1_g288670 Hydrangea macrophylla HOM05D001128 ORTHO05D000721 1.0e-05 54.7 126 34.9
PGSC0003DMG400011730 Solanum tuberosum HOM05D001128 ORTHO05D000721 1.0e-05 54.7 128 33.6


User provided reference genes

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