Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 1.8e-229 798.9 411 100.0
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 3.9e-54 216.5 427 39.6
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 8.7e-54 215.3 426 37.3
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 7.4e-53 212.2 453 36.4
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 1.8e-51 207.6 451 36.4
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 1.2e-50 204.9 442 36.0
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 4.9e-49 199.5 439 34.9
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 1.6e-47 194.5 440 34.3
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 2.7e-47 193.7 434 35.7
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 3.5e-47 193.4 424 37.5
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 1.3e-46 191.4 434 35.7
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 5.1e-46 189.5 437 35.7
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 6.7e-46 189.1 437 35.5
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 1.5e-45 188.0 439 34.9
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.9e-45 187.6 433 37.4
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 6.3e-44 182.6 400 36.5
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 6.3e-44 182.6 408 35.8
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.1e-43 181.8 411 36.3
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.4e-43 180.6 402 37.1
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.2e-42 178.3 419 35.8
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 2.6e-42 177.2 329 40.1
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 1.6e-39 167.9 442 31.2
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 2.7e-39 167.2 414 34.1
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 7.9e-39 165.6 449 31.0
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 1.8e-38 164.5 418 34.9
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 8.7e-38 162.2 431 35.0
CANSAT54G2733 Cannabis sativa HOM05D003726 ORTHO05D003520 1.5e-37 161.4 431 33.2
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 3.3e-37 160.2 456 31.8
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 7.4e-37 159.1 308 39.6
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 6.3e-36 156.0 446 31.4
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 2.6e-34 150.6 449 29.6
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.5e-34 149.8 395 32.9
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 1.0e-33 148.7 312 37.2
Actinidia34457 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.3e-33 148.3 412 33.0
FAN25G1890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.3e-33 148.3 411 32.4
RcHm_v2.0_Chr5g0069911 Rosa chinensis HOM05D003726 ORTHO05D003520 4.2e-32 143.3 406 34.0
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 5.5e-32 142.9 461 33.4
FAN21G3554 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.6e-31 141.4 395 32.7
Sed0002259 Sechium edule HOM05D003726 ORTHO05D003520 1.6e-31 141.4 409 32.0
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 2.7e-31 140.6 422 31.3
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 4.6e-31 139.8 445 33.3
Phvul.008G260800 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 6.1e-31 139.4 435 31.3
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.0e-30 138.7 459 32.9
Nitab4.5_0008578g0030 Nicotiana tabacum HOM05D003726 ORTHO05D003520 1.4e-30 138.3 412 32.3
Lj6g0007419 Lotus japonicus HOM05D003726 ORTHO05D003520 2.3e-30 137.5 413 32.4
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 6.7e-30 136.0 398 31.4
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 8.8e-30 135.6 389 29.8
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 8.8e-30 135.6 388 31.7
MD03G1068300 Malus domestica HOM05D003726 ORTHO05D003520 1.5e-29 134.8 421 33.3
VMungo0647G1535 Vigna mungo HOM05D003726 ORTHO05D003520 1.5e-29 134.8 429 31.7
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 3.3e-29 133.7 429 31.5
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 3.3e-29 133.7 435 31.5
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 1.7e-28 131.3 420 31.2
Rhsim01G0236900 Rhododendron simsii HOM05D003726 ORTHO05D003520 2.8e-28 130.6 406 33.5
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 8.2e-28 129.0 389 30.1
FvH4_3g38760 Fragaria vesca HOM05D003726 ORTHO05D003520 1.1e-27 128.6 397 31.0
FAN11G0812 Fragaria x ananassa HOM05D003726 ORTHO05D003520 5.3e-27 126.3 397 30.7
MD11G1072700 Malus domestica HOM05D003726 ORTHO05D003520 1.2e-26 125.2 407 33.4
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 1.5e-26 124.8 441 31.5
Hund20990 Selenicereus undatus HOM05D003726 ORTHO05D003520 2.0e-26 124.4 437 31.1
Eucgr.B02248 Eucalyptus grandis HOM05D003726 ORTHO05D003520 7.7e-26 122.5 422 28.9
Glyma.14G194200 Glycine max HOM05D003726 ORTHO05D003520 1.0e-25 122.1 441 29.9
Lalb_Chr04g0252221 Lupinus albus HOM05D003726 ORTHO05D003520 1.0e-25 122.1 415 30.8
Glyma.02G227100 Glycine max HOM05D003726 ORTHO05D003520 1.3e-25 121.7 429 29.8
AUR62020147 Chenopodium quinoa HOM05D003726 ORTHO05D003520 1.7e-25 121.3 373 30.3
MELO3C020542.2 Cucumis melo HOM05D003726 ORTHO05D003520 2.9e-25 120.6 418 30.1
CsaV3_1G036240 Cucumis sativus L. HOM05D003726 ORTHO05D003520 5.0e-25 119.8 436 28.9
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 1.1e-24 118.6 448 29.2
Lsat_1_v5_gn_8_70880 Lactuca sativa HOM05D003726 ORTHO05D003520 9.4e-24 115.5 405 31.9
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 1.2e-23 115.2 454 28.2
GSVIVG01011170001 Vitis vinifera HOM05D003726 ORTHO05D003520 4.7e-23 113.2 399 29.1
CSS0035019 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.0e-21 107.8 424 29.0
PGR102G0699 Punica granatum HOM05D003726 ORTHO05D003520 4.4e-21 106.7 415 28.0
Duzib128G0808 Durio zibethinus HOM05D003726 ORTHO05D003520 7.4e-21 105.9 416 29.1
Phvul.010G076500 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 7.4e-21 105.9 414 26.3
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 1.3e-20 105.1 416 26.7
Cpa.g.sc11.124 Carica papaya HOM05D003726 ORTHO05D003520 1.7e-20 104.8 434 27.6
MD04G1154900 Malus domestica HOM05D003726 ORTHO05D003520 2.2e-20 104.4 408 27.5
LjContig00155g0026227 Lotus japonicus HOM05D003726 ORTHO05D003520 2.8e-20 104.0 425 29.2
THA.LOC104810708 Tarenaya hassleriana HOM05D003726 ORTHO05D003520 2.4e-19 100.9 429 28.4
Potri.016G117400 Populus trichocarpa HOM05D003726 ORTHO05D003520 3.1e-19 100.5 425 24.9
Atru.chr3.4198 Acer truncatum HOM05D003726 ORTHO05D003520 4.1e-19 100.1 415 28.7
Duzib093G1061 Durio zibethinus HOM05D003726 ORTHO05D003520 5.3e-19 99.8 417 28.1
Prupe.6G278700 Prunus persica HOM05D003726 ORTHO05D003520 5.3e-19 99.8 428 25.9
Sed0010018 Sechium edule HOM05D003726 ORTHO05D003520 7.0e-19 99.4 327 30.3
CARHR272490 Cardamine hirsuta HOM05D011448 ORTHO05D003520 9.1e-19 99.0 384 30.5
AT5G58630 Arabidopsis thaliana HOM05D011448 ORTHO05D003520 3.5e-18 97.1 404 30.9
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 3.5e-18 97.1 417 29.0
Psat5g158000 Pisum sativum HOM05D003726 ORTHO05D003520 3.5e-18 97.1 444 28.8
Thecc.05G014300 Theobroma cacao HOM05D003726 ORTHO05D003520 7.7e-18 95.9 415 28.2
arahy.Tifrunner.gnm1.ann1.IE2B4C Arachis hypogaea HOM05D003726 ORTHO05D003520 1.3e-17 95.1 446 29.1
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 1.3e-17 95.1 393 30.0
Actinidia05361 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.7e-17 94.7 460 25.4
Manes.09G107700 Manihot esculenta HOM05D003726 ORTHO05D003520 1.7e-17 94.7 422 27.5
arahy.Tifrunner.gnm1.ann1.P4YYRQ Arachis hypogaea HOM05D003726 ORTHO05D003520 2.2e-17 94.4 436 29.6
CiPaw.09G210300 Carya illinoinensis HOM05D003726 ORTHO05D003520 3.8e-17 93.6 418 24.2
ECA236G2409 Erigeron canadensis HOM05D000674 ORTHO05D001490 5.0e-17 93.2 330 31.5
AL8G34900 Arabidopsis lyrata HOM05D011448 ORTHO05D003520 6.5e-17 92.8 424 30.9
MSTRG.12680 Avicennia marina HOM05D003726 ORTHO05D003520 6.5e-17 92.8 411 31.1
Lalb_Chr07g0193641 Lupinus albus HOM05D003726 ORTHO05D003520 8.5e-17 92.4 404 27.0
MD12G1168500 Malus domestica HOM05D003726 ORTHO05D003520 8.5e-17 92.4 415 26.5
BcaC04g19824 Brassica carinata HOM05D011448 ORTHO05D003520 1.5e-16 91.7 385 29.6
BolC9t57921H Brassica oleracea HOM05D011448 ORTHO05D003520 1.5e-16 91.7 385 29.6
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 4.2e-16 90.1 422 28.7
Thhalv10015324m.g Eutrema salsugineum HOM05D011448 ORTHO05D003520 7.2e-16 89.4 391 30.2
C09p50710 Brassica napus HOM05D011448 ORTHO05D003520 9.4e-16 89.0 393 28.5
SalBow2G1798 Salvia bowleyana HOM05D003726 ORTHO05D003520 1.6e-15 88.2 384 27.6
CSS0024143 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 2.7e-15 87.4 292 31.2
AUR62001632 Chenopodium quinoa HOM05D003726 ORTHO05D003520 2.7e-15 87.4 171 37.4
Gohir.A09G165800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.7e-15 86.7 400 26.0
Dinv14505 Davidia involucrata HOM05D003726 ORTHO05D003520 6.1e-15 86.3 401 27.4
FvH4_6g11320 Fragaria vesca HOM05D003726 ORTHO05D003520 6.1e-15 86.3 435 27.6
Sabra16G0113500 Salix brachista HOM05D003726 ORTHO05D003520 6.1e-15 86.3 421 24.0
A10p15630 Brassica napus HOM05D011448 ORTHO05D003520 1.0e-14 85.5 384 26.8
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 1.8e-14 84.7 423 26.5
Gorai.006G183100 Gossypium raimondii HOM05D003726 ORTHO05D003520 3.0e-14 84.0 396 24.5
FAN14G0787 Fragaria x ananassa HOM05D003726 ORTHO05D003520 4.0e-14 83.6 432 26.6
Phvul.008G098200 Phaseolus vulgaris HOM05D003726 ORTHO05D003520 4.0e-14 83.6 367 27.0
FAN02G2870 Fragaria x ananassa HOM05D003726 ORTHO05D003520 8.8e-14 82.4 433 26.1
Sp6g20330 Schrenkiella parvula HOM05D011448 ORTHO05D003520 1.1e-13 82.0 389 28.0
FAN09G2526 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.5e-13 81.6 420 25.0
BraA10t43670Z Brassica rapa HOM05D011448 ORTHO05D003520 2.6e-13 80.9 384 26.6
TPR.G34575 Trifolium pratense HOM05D003726 ORTHO05D003520 3.3e-13 80.5 410 27.6
Gohir.D09G161366 Gossypium hirsutum HOM05D003726 ORTHO05D003520 4.4e-13 80.1 396 24.5
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 9.7e-13 79.0 392 27.0
VMungo1383G2513 Vigna mungo HOM05D003726 ORTHO05D003520 9.7e-13 79.0 373 25.7
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 1.3e-12 78.6 411 27.0
Nitab4.5_0000261g0020 Nicotiana tabacum HOM05D003726 ORTHO05D003520 6.3e-12 76.3 398 26.6
Nitab4.5_0002020g0040 Nicotiana tabacum HOM05D003726 ORTHO05D003520 6.3e-12 76.3 407 25.1
MELO3C009159.2 Cucumis melo HOM05D003726 ORTHO05D003520 1.1e-11 75.5 278 29.9
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 1.8e-11 74.7 388 27.6
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 1.8e-11 74.7 397 24.7
CDE04G1884 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 2.4e-11 74.3 426 27.2
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 3.1e-11 73.9 429 24.9
VMungo0331G0804 Vigna mungo HOM05D003726 ORTHO05D003520 4.1e-11 73.6 319 27.9
CsaV3_3G033690 Cucumis sativus L. HOM05D003726 ORTHO05D003520 5.3e-11 73.2 397 25.7
PGR031G0398 Punica granatum HOM05D003726 ORTHO05D003520 9.1e-11 72.4 413 26.2
Carub.0008s1925 Capsella rubella HOM05D011448 ORTHO05D003520 1.6e-10 71.6 326 28.8
HanXRQChr05g0135801 Helianthus annuus HOM05D003726 ORTHO05D003520 1.6e-10 71.6 273 28.9
ClCG10G022200 Citrullus lanatus HOM05D003726 ORTHO05D003520 3.5e-10 70.5 419 25.1
Oeu005176.1 Olea europaea HOM05D003726 ORTHO05D003520 4.5e-10 70.1 398 27.6
Psat2g057960 Pisum sativum HOM05D003726 ORTHO05D003520 4.5e-10 70.1 396 25.8
arahy.Tifrunner.gnm1.ann1.3NQ7J1 Arachis hypogaea HOM05D003726 ORTHO05D003520 5.9e-10 69.7 425 26.6
arahy.Tifrunner.gnm1.ann1.DIZ6KI Arachis hypogaea HOM05D003726 ORTHO05D003520 7.7e-10 69.3 425 26.4
FAN21G2890 Fragaria x ananassa HOM05D003726 ORTHO05D003520 7.7e-10 69.3 155 34.2
Glyma.03G056800 Glycine max HOM05D003726 ORTHO05D003520 7.7e-10 69.3 442 25.8
TWI53G1918 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 7.7e-10 69.3 400 26.0
Solyc09g005570.3 Solanum lycopersicum HOM05D003726 ORTHO05D003520 3.8e-09 67.0 158 33.5
Sopen09g001480 Solanum pennellii HOM05D003726 ORTHO05D003520 3.8e-09 67.0 158 33.5
PGSC0003DMG400030244 Solanum tuberosum HOM05D003726 ORTHO05D003520 6.5e-09 66.2 162 32.1
RcHm_v2.0_Chr3g0462881 Rosa chinensis HOM05D003726 ORTHO05D003520 8.5e-09 65.9 430 24.0
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 1.5e-08 65.1 431 25.1
PSO384G5133 Papaver somniferum HOM05D003726 ORTHO05D003520 1.5e-08 65.1 333 26.7
Migut.L02021 Erythranthe guttata HOM05D003726 ORTHO05D003520 4.2e-08 63.5 396 24.2
EL10Ac5g12551 Beta vulgaris HOM05D029928 ORTHO05D003520 5.5e-08 63.2 399 26.8
CDE08G1412 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 7.2e-08 62.8 435 25.1
Ca_05609_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 7.2e-08 62.8 276 26.4
CSS0025538 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 9.4e-08 62.4 347 25.6
TWI74G0063 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 9.4e-08 62.4 417 24.5
FAN14G4204 Fragaria x ananassa HOM05D003726 ORTHO05D003520 1.2e-07 62.0 330 27.0
Actinidia11576 Actinidia chinensis HOM05D003726 ORTHO05D003520 1.6e-07 61.6 396 24.7
Lsat_1_v5_gn_5_149441 Lactuca sativa HOM05D003726 ORTHO05D003520 1.6e-07 61.6 236 29.2
Medtr5g071090 Medicago truncatula HOM05D003726 ORTHO05D003520 2.1e-07 61.2 317 24.3
CSS0029870 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 3.6e-07 60.5 347 25.4
MSTRG.26816 Avicennia marina HOM05D003726 ORTHO05D003520 8.0e-07 59.3 408 24.8
Medtr4g015650 Medicago truncatula HOM05D003726 ORTHO05D003520 8.0e-07 59.3 394 22.8
Peaxi162Scf00170g00213 Petunia axillaris HOM05D003726 ORTHO05D003520 8.0e-07 59.3 146 30.1
Sed0008005 Sechium edule HOM05D003726 ORTHO05D003520 1.0e-06 58.9 397 26.2
SalBow4G2563 Salvia bowleyana HOM05D003726 ORTHO05D003520 1.8e-06 58.2 162 31.5
arahy.Tifrunner.gnm1.ann1.XHL4C7 Arachis hypogaea HOM05D003726 ORTHO05D003520 2.3e-06 57.8 160 31.2
SGA_v2.0_scaffold110G31210 Striga asiatica HOM05D003726 ORTHO05D003520 2.3e-06 57.8 177 31.1
Peaxi162Scf79720g00003 Petunia axillaris HOM05D003726 ORTHO05D003520 3.0e-06 57.4 156 30.8
HPP92_013884 Vanilla planifolia HOM05D003726 ORTHO05D003520 4.0e-06 57.0 401 23.4
Gorai.012G114900 Gossypium raimondii HOM05D003726 ORTHO05D003520 5.2e-06 56.6 270 30.7
Oeu054393.1 Olea europaea HOM05D003726 ORTHO05D003520 5.2e-06 56.6 418 25.1
Actinidia20741 Actinidia chinensis HOM05D003726 ORTHO05D003520 6.8e-06 56.2 281 26.3


User provided reference genes

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