Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005879 Daucus carota HOM05D003369 ORTHO05D004089 2.2e-310 1068.1 552 100.0
Dinv34494 Davidia involucrata HOM05D003369 ORTHO05D004089 4.1e-256 887.9 547 84.8
DCAR_007356 Daucus carota HOM05D003369 ORTHO05D004089 8.4e-254 880.2 552 83.0
Ca_09969_v3 Cicer arietinum L. HOM05D003369 ORTHO05D004089 1.8e-251 872.5 547 82.8
Nitab4.5_0000171g0170 Nicotiana tabacum HOM05D003369 ORTHO05D004089 2.8e-249 865.1 547 82.3
CSS0036715 Camellia sinensis var. sinensis HOM05D003369 ORTHO05D004089 8.2e-249 863.6 595 77.3
GSVIVG01032663001 Vitis vinifera HOM05D003369 ORTHO05D004089 1.2e-247 859.8 595 77.0
Duzib114G1008 Durio zibethinus HOM05D003369 ORTHO05D004089 7.7e-247 857.1 595 76.0
Prupe.1G349800 Prunus persica HOM05D003369 ORTHO05D004089 1.7e-246 855.9 595 75.8
TWI09G0152 Tripterygium wilfordii HOM05D003369 ORTHO05D004089 1.7e-246 855.9 595 76.5
Thecc.10G184000 Theobroma cacao HOM05D003369 ORTHO05D004089 3.8e-246 854.7 595 76.3
TAR633G0919 Trochodendron aralioides HOM05D003369 ORTHO05D004089 1.4e-245 852.8 595 76.3
HanXRQChr14g0460671 Helianthus annuus HOM05D003369 ORTHO05D004089 3.2e-245 851.7 596 76.2
Ciclev10030740m.g Citrus clementina HOM05D003369 ORTHO05D004089 5.5e-245 850.9 595 75.1
Lj5g0006652 Lotus japonicus HOM05D003369 ORTHO05D004089 1.2e-244 849.7 595 75.6
ECA238G1180 Erigeron canadensis HOM05D003369 ORTHO05D004089 2.1e-244 849.0 595 75.5
CANSAT54G1399 Cannabis sativa HOM05D003369 ORTHO05D004089 6.1e-244 847.4 595 76.0
COL.COLO4_19461 Corchorus olitorius HOM05D003369 ORTHO05D004089 6.1e-244 847.4 591 76.1
Peaxi162Scf00739g00425 Petunia axillaris HOM05D003369 ORTHO05D004089 6.1e-244 847.4 615 74.3
Cpa.g.sc19.46 Carica papaya HOM05D003369 ORTHO05D004089 1.0e-243 846.7 585 76.8
Gorai.009G292700 Gossypium raimondii HOM05D003369 ORTHO05D004089 1.4e-243 846.3 595 75.5
HanXRQChr15g0493711 Helianthus annuus HOM05D003369 ORTHO05D004089 1.4e-243 846.3 593 75.4
CAN.G203.55 Capsicum annuum HOM05D003369 ORTHO05D004089 1.8e-243 845.9 595 74.6
Gohir.D05G279200 Gossypium hirsutum HOM05D003369 ORTHO05D004089 1.8e-243 845.9 595 75.3
FvH4_4g37220 Fragaria vesca HOM05D003369 ORTHO05D004089 2.3e-243 845.5 595 75.3
Gohir.A05G277600 Gossypium hirsutum HOM05D003369 ORTHO05D004089 3.0e-243 845.1 595 75.3
Actinidia13643 Actinidia chinensis HOM05D003369 ORTHO05D004089 6.7e-243 844.0 595 76.3
MSTRG.27258 Avicennia marina HOM05D003369 ORTHO05D004089 6.7e-243 844.0 593 74.9
TPR.G35277 Trifolium pratense HOM05D003369 ORTHO05D004089 6.7e-243 844.0 594 75.3
Atru.chr12.204 Acer truncatum HOM05D003369 ORTHO05D004089 8.8e-243 843.6 595 74.6
Lsat_1_v5_gn_2_126361 Lactuca sativa HOM05D003369 ORTHO05D004089 8.8e-243 843.6 592 75.5
FAN17G2799 Fragaria x ananassa HOM05D003369 ORTHO05D004089 1.5e-242 842.8 595 75.1
SalBow3G2694 Salvia bowleyana HOM05D003369 ORTHO05D004089 2.0e-242 842.4 578 77.5
Duzib106G0164 Durio zibethinus HOM05D003369 ORTHO05D004089 2.5e-242 842.0 595 75.1
Nitab4.5_0000375g0250 Nicotiana tabacum HOM05D003369 ORTHO05D004089 2.5e-242 842.0 554 79.6
RcHm_v2.0_Chr4g0447001 Rosa chinensis HOM05D003369 ORTHO05D004089 2.5e-242 842.0 595 75.1
unitig_0.g2517 Utricularia gibba HOM05D003369 ORTHO05D004089 3.3e-242 841.6 532 81.8
TWI53G1724 Tripterygium wilfordii HOM05D003369 ORTHO05D004089 4.3e-242 841.3 604 74.7
Manes.10G002000 Manihot esculenta HOM05D003369 ORTHO05D004089 5.7e-242 840.9 595 74.6
Aqoxy3G00685 Aquilegia oxysepala HOM05D003369 ORTHO05D004089 7.4e-242 840.5 595 75.6
Sed0008109 Sechium edule HOM05D003369 ORTHO05D004089 1.3e-241 839.7 595 75.6
Eucgr.J00108 Eucalyptus grandis HOM05D003369 ORTHO05D004089 1.7e-241 839.3 596 75.7
FAN07G2686 Fragaria x ananassa HOM05D003369 ORTHO05D004089 1.7e-241 839.3 595 74.8
Lsat_1_v5_gn_9_60180 Lactuca sativa HOM05D003369 ORTHO05D004089 2.2e-241 839.0 593 74.7
MELO3C022652.2 Cucumis melo HOM05D003369 ORTHO05D004089 2.8e-241 838.6 595 75.1
CsaV3_3G030590 Cucumis sativus L. HOM05D003369 ORTHO05D004089 2.8e-241 838.6 595 75.3
Medtr6g086565 Medicago truncatula HOM05D003369 ORTHO05D004089 4.8e-241 837.8 594 74.6
Migut.F00574 Erythranthe guttata HOM05D003369 ORTHO05D004089 6.3e-241 837.4 595 75.0
Sopen06g015200 Solanum pennellii HOM05D003369 ORTHO05D004089 6.3e-241 837.4 595 74.6
Glyma.20G219600 Glycine max HOM05D003369 ORTHO05D004089 8.2e-241 837.0 595 74.6
MD00G1126900 Malus domestica HOM05D003369 ORTHO05D004089 8.2e-241 837.0 596 75.5
Psat4g220880 Pisum sativum HOM05D003369 ORTHO05D004089 8.2e-241 837.0 594 74.2
ClCG11G010900 Citrullus lanatus HOM05D003369 ORTHO05D004089 1.1e-240 836.6 595 75.3
CiPaw.10G110000 Carya illinoinensis HOM05D003369 ORTHO05D004089 1.4e-240 836.3 595 75.0
QL05p063633 Quercus lobata HOM05D003369 ORTHO05D004089 1.4e-240 836.3 595 75.1
VMungo1383G1217 Vigna mungo HOM05D003369 ORTHO05D004089 5.3e-240 834.3 595 74.1
Nitab4.5_0011372g0040 Nicotiana tabacum HOM05D003369 ORTHO05D004089 3.4e-239 831.6 594 75.1
Phvul.008G055600 Phaseolus vulgaris HOM05D003369 ORTHO05D004089 4.5e-239 831.2 595 73.9
Gohir.D06G186800 Gossypium hirsutum HOM05D003369 ORTHO05D004089 5.9e-239 830.9 595 73.6
Gorai.010G219100 Gossypium raimondii HOM05D003369 ORTHO05D004089 5.9e-239 830.9 595 73.6
THA.LOC104814068 Tarenaya hassleriana HOM05D003369 ORTHO05D004089 1.3e-238 829.7 596 74.0
Phvul.010G077634 Phaseolus vulgaris HOM05D003369 ORTHO05D004089 1.7e-238 829.3 595 73.8
THA.LOC104824367 Tarenaya hassleriana HOM05D003369 ORTHO05D004089 1.7e-238 829.3 595 73.8
CiPaw.09G143000 Carya illinoinensis HOM05D003369 ORTHO05D004089 2.2e-238 828.9 595 74.3
Sopen05g030740 Solanum pennellii HOM05D003369 ORTHO05D004089 2.9e-238 828.6 595 73.6
MD13G1002600 Malus domestica HOM05D003369 ORTHO05D004089 5.0e-238 827.8 596 74.8
Oeu063993.2 Olea europaea HOM05D003369 ORTHO05D004089 5.0e-238 827.8 643 70.1
PGR044G0140 Punica granatum HOM05D003369 ORTHO05D004089 5.0e-238 827.8 595 73.4
Solyc06g048890.4 Solanum lycopersicum HOM05D003369 ORTHO05D004089 6.5e-238 827.4 599 74.0
SGA_v2.0_scaffold327G48760 Striga asiatica HOM05D003369 ORTHO05D004089 6.5e-238 827.4 595 74.5
Gohir.A06G179800 Gossypium hirsutum HOM05D003369 ORTHO05D004089 8.5e-238 827.0 595 73.3
Potri.013G090500 Populus trichocarpa HOM05D003369 ORTHO05D004089 8.5e-238 827.0 596 74.5
Solyc05g052200.4 Solanum lycopersicum HOM05D003369 ORTHO05D004089 8.5e-238 827.0 595 73.4
Glyma.18G240600 Glycine max HOM05D003369 ORTHO05D004089 1.4e-237 826.2 595 73.6
ECA232G1960 Erigeron canadensis HOM05D003369 ORTHO05D004089 4.2e-237 824.7 593 73.5
unitig_88.g27820 Utricularia gibba HOM05D003369 ORTHO05D004089 7.2e-237 823.9 532 80.6
Lalb_Chr06g0168441 Lupinus albus HOM05D003369 ORTHO05D004089 1.2e-236 823.2 595 73.8
MBI15_g39391_MAGBIO Magnolia biondii HOM05D003369 ORTHO05D004089 1.6e-236 822.8 595 73.3
Hund05383 Selenicereus undatus HOM05D003369 ORTHO05D004089 2.1e-236 822.4 595 73.8
Nn2g10283 Nelumbo nucifera HOM05D003369 ORTHO05D004089 2.7e-236 822.0 595 73.4
EL10Ac3g06746 Beta vulgaris HOM05D003369 ORTHO05D004089 6.1e-236 820.8 607 72.0
Carub.0004s2301 Capsella rubella HOM05D003369 ORTHO05D004089 6.1e-236 820.8 595 73.3
Aa31LG3G1410 Aethionema arabicum HOM05D003369 ORTHO05D004089 7.9e-236 820.5 595 73.3
AL4G38590 Arabidopsis lyrata HOM05D003369 ORTHO05D004089 1.4e-235 819.7 596 73.7
PSO170G0385 Papaver somniferum HOM05D003369 ORTHO05D004089 1.4e-235 819.7 595 73.8
BcaB01g03521 Brassica carinata HOM05D003369 ORTHO05D004089 1.8e-235 819.3 595 73.1
CDE07G0902 Ceratophyllum demersum HOM05D003369 ORTHO05D004089 1.8e-235 819.3 547 78.2
AT2G40730 Arabidopsis thaliana HOM05D003369 ORTHO05D004089 2.3e-235 818.9 595 73.3
Glyma.09G252000 Glycine max HOM05D003369 ORTHO05D004089 2.3e-235 818.9 595 73.1
Thhalv10016269m.g Eutrema salsugineum HOM05D003369 ORTHO05D004089 5.1e-235 817.8 595 72.9
BcaC01g05384 Brassica carinata HOM05D003369 ORTHO05D004089 1.1e-234 816.6 596 73.3
PSO017G0651 Papaver somniferum HOM05D003369 ORTHO05D004089 1.5e-234 816.2 595 73.6
Sp4g23040 Schrenkiella parvula HOM05D003369 ORTHO05D004089 1.5e-234 816.2 595 73.1
CARHR135820 Cardamine hirsuta HOM05D003369 ORTHO05D004089 4.4e-234 814.7 596 73.0
Potri.019G059200 Populus trichocarpa HOM05D003369 ORTHO05D004089 9.7e-234 813.5 598 74.2
Sabra19G0074300 Salix brachista HOM05D003369 ORTHO05D004089 9.7e-234 813.5 598 73.7
BcaB06g29170 Brassica carinata HOM05D003369 ORTHO05D004089 2.8e-233 812.0 596 73.0
A03p22890 Brassica napus HOM05D003369 ORTHO05D004089 2.8e-233 812.0 597 73.2
C03p27140 Brassica napus HOM05D003369 ORTHO05D004089 2.8e-233 812.0 597 73.2
BolC3t15095H Brassica oleracea HOM05D003369 ORTHO05D004089 2.8e-233 812.0 597 73.2
BcaC02g07330 Brassica carinata HOM05D003369 ORTHO05D004089 4.8e-233 811.2 596 72.7
Sc05g0004490 Simmondsia chinensis HOM05D003369 ORTHO05D004089 4.8e-233 811.2 595 72.4
Rhsim04G0219100 Rhododendron simsii HOM05D003369 ORTHO05D004089 6.3e-233 810.8 665 68.4
BraA03t11513Z Brassica rapa HOM05D003369 ORTHO05D004089 1.4e-232 809.7 597 73.0
BraA04t18565Z Brassica rapa HOM05D003369 ORTHO05D004089 1.4e-232 809.7 596 72.7
Nitab4.5_0003473g0020 Nicotiana tabacum HOM05D003369 ORTHO05D004089 4.1e-232 808.1 537 79.9
AUR62037781 Chenopodium quinoa HOM05D003369 ORTHO05D004089 2.6e-231 805.4 595 72.3
A04p31100 Brassica napus HOM05D003369 ORTHO05D004089 3.5e-231 805.1 597 72.5
C04p68490 Brassica napus HOM05D003369 ORTHO05D004089 4.5e-231 804.7 597 72.2
Nn5g26838 Nelumbo nucifera HOM05D003369 ORTHO05D004089 5.9e-231 804.3 553 76.7
ATR1127G027 Amborella trichopoda HOM05D003369 ORTHO05D004089 1.3e-230 803.1 595 72.9
Os01g0819900 Oryza sativa ssp. japonica HOM05D003369 ORTHO05D004089 1.3e-230 803.1 594 71.2
HPP92_018085 Vanilla planifolia HOM05D003369 ORTHO05D004089 5.0e-230 801.2 594 70.7
BolC4t28349H Brassica oleracea HOM05D003369 ORTHO05D004089 8.5e-230 800.4 597 72.0
Manes.07G142600 Manihot esculenta HOM05D003369 ORTHO05D004089 5.5e-229 797.7 596 72.3
Oeu018743.1 Olea europaea HOM05D003369 ORTHO05D004089 6.7e-227 790.8 554 76.0
vmacro06898 Vaccinium macrocarpon HOM05D003369 ORTHO05D004089 8.8e-227 790.4 726 62.9
Rhsim03G0153200 Rhododendron simsii HOM05D003369 ORTHO05D004089 3.7e-225 785.0 725 62.6
arahy.Tifrunner.gnm1.ann1.HI4H5F Arachis hypogaea HOM05D003369 ORTHO05D004089 9.8e-218 760.4 594 69.0
arahy.Tifrunner.gnm1.ann1.ABG2GV Arachis hypogaea HOM05D003369 ORTHO05D004089 6.3e-217 757.7 594 68.7
Mapoly0025s0051 Marchantia polymorpha HOM05D003369 ORTHO05D004089 3.0e-211 738.8 597 66.3
Pp3c3_22310 Physcomitrium patens HOM05D003369 ORTHO05D004089 3.1e-208 728.8 589 66.2
Lj8C53G16 Lonicera japonica HOM05D003369 ORTHO05D004089 7.7e-207 724.2 559 71.9
AUR62042224 Chenopodium quinoa HOM05D003369 ORTHO05D004089 1.2e-199 700.3 551 69.5
AagrBONN_evm.TU.Sc2ySwM_117.1623 Anthoceros agrestis HOM05D003369 ORTHO05D004089 7.8e-199 697.6 593 63.2
Ah.13g075100 Amaranthus hybridus HOM05D003369 ORTHO05D004089 4.4e-194 681.8 611 63.5
Lalb_Chr02g0149401 Lupinus albus HOM05D003369 ORTHO05D004089 1.8e-187 659.8 478 73.2
SMO199G0006 Selaginella moellendorffii HOM05D003369 ORTHO05D004089 1.8e-187 659.8 579 61.8
CBR_g49707 Chara braunii HOM05D003369 ORTHO05D004089 1.1e-176 624.0 588 57.1
SHI28914 Sapria himalayana HOM05D003369 ORTHO05D004089 9.6e-165 584.3 527 62.8
VMungo0720G1409 Vigna mungo HOM05D003369 ORTHO05D004089 4.3e-149 532.3 340 82.6
Psat3g198120 Pisum sativum HOM05D003369 ORTHO05D004089 1.6e-148 530.4 340 82.6
SMO361G0532 Selaginella moellendorffii HOM05D003369 ORTHO05D004089 4.2e-144 515.8 436 62.2
Zm00001eb368920 Zea mays HOM05D003369 ORTHO05D004089 2.1e-140 503.4 339 76.7
Psat0s4462g0120 Pisum sativum HOM05D003369 ORTHO05D004089 2.8e-140 503.1 430 63.0
Haze_05901 Corylus avellana HOM05D003369 ORTHO05D004089 3.3e-133 479.6 495 58.2
Cre13.g575300 Chlamydomonas reinhardtii HOM05D003369 ORTHO05D004089 2.2e-129 466.8 555 47.2
CSS0047544 Camellia sinensis var. sinensis HOM05D003369 ORTHO05D004089 1.1e-117 427.9 249 90.0
PRCOL_00000010 Prasinoderma coloniale HOM05D003369 ORTHO05D004089 3.1e-115 419.9 599 43.4
MCO06G273 Micromonas commoda HOM05D003369 ORTHO05D004089 7.0e-115 418.7 547 45.5
MSTRG.18905 Avicennia marina HOM05D003369 ORTHO05D004089 2.9e-113 413.3 241 88.4
BcaC02g12730 Brassica carinata HOM05D003369 ORTHO05D004089 1.8e-102 377.5 435 54.3
SEGI_10704 Sequoiadendron giganteum HOM05D003369 ORTHO05D004089 4.4e-93 346.3 209 85.6
Psat0s4462g0200 Pisum sativum HOM05D003369 ORTHO05D004089 7.3e-88 328.9 318 59.4
Glyma.10G170400 Glycine max HOM05D003369 ORTHO05D004089 6.8e-86 322.4 192 81.2
CBR_g756 Chara braunii HOM05D000486 ORTHO05D004089 1.4e-83 314.7 292 56.5
Actinidia31631 Actinidia chinensis HOM05D003369 ORTHO05D004089 2.0e-82 310.8 423 49.9
Medtr1g078330 Medicago truncatula HOM05D003369 ORTHO05D004089 5.9e-82 309.3 188 78.7
Haze_05900 Corylus avellana HOM05D003369 ORTHO05D004089 4.3e-80 303.1 261 63.2
Mapoly0025s0052 Marchantia polymorpha HOM05D003369 ORTHO05D004089 2.4e-67 260.8 321 46.1
C04p02180 Brassica napus HOM05D003369 ORTHO05D004089 4.0e-62 243.4 285 51.9
TPR.G12602 Trifolium pratense HOM05D003369 ORTHO05D004089 1.1e-54 218.8 146 80.8
PGSC0003DMG400008777 Solanum tuberosum HOM05D003369 ORTHO05D004089 4.0e-54 216.9 128 81.2
CSS0031610 Camellia sinensis var. sinensis HOM05D003369 ORTHO05D004089 2.9e-44 184.1 111 82.9
Lalb_Chr02g0149391 Lupinus albus HOM05D003369 ORTHO05D004089 1.5e-40 171.8 125 72.8
C04p02200 Brassica napus HOM05D003369 ORTHO05D004089 4.3e-40 170.2 205 51.2
QL09p045246 Quercus lobata HOM05D003369 ORTHO05D004089 1.2e-34 152.1 147 63.3
BolC4t21865H Brassica oleracea HOM05D003369 ORTHO05D004089 1.8e-30 138.3 182 46.2
SEGI_35831 Sequoiadendron giganteum HOM05D003369 ORTHO05D004089 1.7e-28 131.7 91 72.5
QL03p033225 Quercus lobata HOM05D000026 ORTHO05D000127 7.9e-26 122.9 105 67.6
MSTRG.8879 Avicennia marina HOM05D003369 ORTHO05D004089 3.0e-25 120.9 80 72.5
Lsat_1_v5_gn_8_135680 Lactuca sativa HOM05D003369 ORTHO05D004089 5.1e-25 120.2 83 73.5
QL08p059957 Quercus lobata HOM05D000062 ORTHO05D000043 6.7e-25 119.8 75 84.0
Lsat_1_v5_gn_4_100601 Lactuca sativa HOM05D004250 ORTHO05D005264 3.3e-24 117.5 72 79.2
QL07p007378 Quercus lobata HOM05D003369 ORTHO05D004089 7.4e-24 116.3 76 78.9
Lsat_1_v5_gn_8_20221 Lactuca sativa HOM05D003369 ORTHO05D004089 9.7e-24 115.9 83 71.1
Lsat_1_v5_gn_2_20300 Lactuca sativa HOM05D003369 ORTHO05D004089 2.8e-23 114.4 83 69.9
Lsat_1_v5_gn_8_162600 Lactuca sativa HOM05D003369 ORTHO05D004089 3.1e-22 110.9 83 68.7
Zm00001eb149610 Zea mays HOM05D003369 ORTHO05D004089 5.3e-22 110.2 89 65.2
SMO361G0312 Selaginella moellendorffii HOM05D003369 ORTHO05D004089 5.0e-20 103.6 185 41.6
Psat5g211480 Pisum sativum HOM05D003369 ORTHO05D004089 1.9e-19 101.7 59 78.0
QL12p002321 Quercus lobata HOM05D003369 ORTHO05D006179 2.5e-19 101.3 94 63.8
QL05p076317 Quercus lobata HOM05D003369 ORTHO05D004089 2.3e-17 94.7 61 85.2
Sabra12G0046000 Salix brachista HOM05D003369 ORTHO05D004089 2.5e-16 91.3 53 77.4
Sabra12G0046600 Salix brachista HOM05D003369 ORTHO05D004089 1.7e-15 88.6 160 42.5
QL10p029382 Quercus lobata HOM05D003369 ORTHO05D004089 5.3e-14 83.6 55 81.8
Hma1.2p1_0264F.1_g106030 Hydrangea macrophylla HOM05D003369 ORTHO05D004089 2.2e-12 78.2 54 70.4
Sed0010413 Sechium edule HOM05D003369 ORTHO05D004089 1.9e-11 75.1 75 54.7
BolC4t21866H Brassica oleracea HOM05D003369 ORTHO05D004089 2.5e-11 74.7 39 84.6
CSS0030194 Camellia sinensis var. sinensis HOM05D003369 ORTHO05D004089 9.4e-11 72.8 56 67.9
SEGI_31936 Sequoiadendron giganteum HOM05D003369 ORTHO05D004089 1.6e-10 72.0 42 81.0
Duzib251G0615 Durio zibethinus HOM05D003369 ORTHO05D004089 1.4e-09 68.9 42 76.2
GSVIVG01013623001 Vitis vinifera HOM05D003369 ORTHO05D016673 2.2e-07 61.6 35 71.4


User provided reference genes

Program Settings