Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005801 Daucus carota HOM05D006321 ORTHO05D007929 8.4e-70 266.9 137 100.0
Sc03g0007150 Simmondsia chinensis HOM05D006321 ORTHO05D007929 3.2e-45 185.3 102 78.4
Hund14984 Selenicereus undatus HOM05D006321 ORTHO05D007929 4.6e-44 181.4 102 77.5
CiPaw.08G033200 Carya illinoinensis HOM05D006321 ORTHO05D007929 6.1e-44 181.0 100 77.0
Duzib251G0486 Durio zibethinus HOM05D006321 ORTHO05D007929 7.9e-44 180.6 101 78.2
COL.COLO4_27457 Corchorus olitorius HOM05D006321 ORTHO05D007929 1.0e-43 180.3 102 77.5
Dinv25432 Davidia involucrata HOM05D006321 ORTHO05D007929 2.3e-43 179.1 102 75.5
Thecc.09G184700 Theobroma cacao HOM05D006321 ORTHO05D007929 1.1e-42 176.8 102 76.5
CSS0046955 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.0e-42 176.0 102 73.5
Sed0024765 Sechium edule HOM05D006321 ORTHO05D007929 2.0e-42 176.0 100 74.0
Nitab4.5_0002365g0010 Nicotiana tabacum HOM05D006321 ORTHO05D007929 2.5e-42 175.6 102 74.5
Gohir.A06G171500 Gossypium hirsutum HOM05D006321 ORTHO05D007929 3.3e-42 175.3 100 75.0
Gohir.D06G179600 Gossypium hirsutum HOM05D006321 ORTHO05D007929 3.3e-42 175.3 100 75.0
Gorai.010G210200 Gossypium raimondii HOM05D006321 ORTHO05D007929 3.3e-42 175.3 100 75.0
EL10Ac5g11827 Beta vulgaris HOM05D006321 ORTHO05D007929 4.3e-42 174.9 102 71.6
AUR62030694 Chenopodium quinoa HOM05D006321 ORTHO05D007929 4.3e-42 174.9 102 70.6
HanXRQChr16g0529271 Helianthus annuus HOM05D006321 ORTHO05D007929 4.3e-42 174.9 101 76.2
Atru.chr7.791 Acer truncatum HOM05D006321 ORTHO05D007929 5.7e-42 174.5 102 72.5
Glyma.01G110600 Glycine max HOM05D006321 ORTHO05D007929 7.4e-42 174.1 102 71.6
AUR62030699 Chenopodium quinoa HOM05D006321 ORTHO05D007929 9.7e-42 173.7 102 69.6
QL02p047686 Quercus lobata HOM05D006321 ORTHO05D007929 9.7e-42 173.7 102 69.6
CSS0021189 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 1.3e-41 173.3 102 72.5
CAN.G279.32 Capsicum annuum HOM05D006321 ORTHO05D007929 1.7e-41 172.9 102 71.6
Ciclev10008911m.g Citrus clementina HOM05D006321 ORTHO05D007929 1.7e-41 172.9 102 75.5
BcaC04g19986 Brassica carinata HOM05D006321 ORTHO05D007929 2.2e-41 172.6 100 74.0
CSS0019729 Camellia sinensis var. sinensis HOM05D006321 ORTHO05D007929 2.2e-41 172.6 102 72.5
Thhalv10014893m.g Eutrema salsugineum HOM05D006321 ORTHO05D007929 2.2e-41 172.6 100 74.0
A10p14640 Brassica napus HOM05D006321 ORTHO05D007929 2.8e-41 172.2 100 74.0
BraA10t43551Z Brassica rapa HOM05D006321 ORTHO05D007929 2.8e-41 172.2 100 74.0
Cc06_g21570 Coffea canephora HOM05D006321 ORTHO05D007929 2.8e-41 172.2 100 73.0
Phvul.006G013600 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 2.8e-41 172.2 102 71.6
vmacro20823 Vaccinium macrocarpon HOM05D006321 ORTHO05D007929 2.8e-41 172.2 102 71.6
CAN.G547.21 Capsicum annuum HOM05D006321 ORTHO05D007929 3.7e-41 171.8 102 70.6
AUR62036340 Chenopodium quinoa HOM05D006321 ORTHO05D007929 3.7e-41 171.8 102 69.6
Aa31LG3G13120 Aethionema arabicum HOM05D006321 ORTHO05D007929 6.3e-41 171.0 100 73.0
Eucgr.C00122 Eucalyptus grandis HOM05D006321 ORTHO05D007929 6.3e-41 171.0 102 69.6
Nn2g12444 Nelumbo nucifera HOM05D006321 ORTHO05D007929 6.3e-41 171.0 101 75.2
Nitab4.5_0000366g0180 Nicotiana tabacum HOM05D006321 ORTHO05D007929 6.3e-41 171.0 102 72.5
VMungo0540G0928 Vigna mungo HOM05D006321 ORTHO05D007929 6.3e-41 171.0 102 70.6
AL8G33200 Arabidopsis lyrata HOM05D006321 ORTHO05D007929 8.2e-41 170.6 100 73.0
Carub.0008s1773 Capsella rubella HOM05D006321 ORTHO05D007929 8.2e-41 170.6 100 73.0
CARHR271020 Cardamine hirsuta HOM05D006321 ORTHO05D007929 8.2e-41 170.6 102 70.6
ECA240G2363 Erigeron canadensis HOM05D006321 ORTHO05D007929 8.2e-41 170.6 101 74.3
Oeu044678.1 Olea europaea HOM05D006321 ORTHO05D007929 8.2e-41 170.6 102 71.6
PGR142G1933 Punica granatum HOM05D006321 ORTHO05D007929 8.2e-41 170.6 102 73.5
Sp6g18970 Schrenkiella parvula HOM05D006321 ORTHO05D007929 8.2e-41 170.6 100 73.0
AT5G57230 Arabidopsis thaliana HOM05D006321 ORTHO05D007929 1.1e-40 170.2 102 71.6
Haze_22010 Corylus avellana HOM05D006321 ORTHO05D007929 1.1e-40 170.2 102 71.6
MELO3C012967.2 Cucumis melo HOM05D006321 ORTHO05D007929 1.4e-40 169.9 102 69.6
BcaB08g36085 Brassica carinata HOM05D006321 ORTHO05D007929 1.8e-40 169.5 100 73.0
THA.LOC104817778 Tarenaya hassleriana HOM05D006321 ORTHO05D007929 1.8e-40 169.5 102 72.5
Migut.L01889 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.4e-40 169.1 100 75.0
Manes.02G106300 Manihot esculenta HOM05D006321 ORTHO05D007929 3.1e-40 168.7 102 71.6
TAR622G0244 Trochodendron aralioides HOM05D006321 ORTHO05D007929 3.1e-40 168.7 101 71.3
COL.COLO4_07534 Corchorus olitorius HOM05D006321 ORTHO05D007929 4.1e-40 168.3 89 82.0
CsaV3_3G025050 Cucumis sativus L. HOM05D006321 ORTHO05D007929 4.1e-40 168.3 102 70.6
Lsat_1_v5_gn_7_55681 Lactuca sativa HOM05D006321 ORTHO05D007929 4.1e-40 168.3 101 74.3
Solyc07g008910.3 Solanum lycopersicum HOM05D006321 ORTHO05D007929 4.1e-40 168.3 100 71.0
Glyma.03G076300 Glycine max HOM05D006321 ORTHO05D007929 5.3e-40 167.9 102 68.6
Phvul.003G138800 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.3e-40 167.9 102 69.6
Phvul.003G139178 Phaseolus vulgaris HOM05D006321 ORTHO05D007929 5.3e-40 167.9 102 69.6
Prupe.1G076700 Prunus persica HOM05D006321 ORTHO05D007929 5.3e-40 167.9 102 70.6
Rhsim01G0118600 Rhododendron simsii HOM05D006321 ORTHO05D007929 5.3e-40 167.9 102 68.6
Potri.018G143500 Populus trichocarpa HOM05D006321 ORTHO05D007929 9.1e-40 167.2 102 71.6
PGSC0003DMG400028738 Solanum tuberosum HOM05D006321 ORTHO05D007929 9.1e-40 167.2 102 68.6
MBI17_g07973_MAGBIO Magnolia biondii HOM05D006321 ORTHO05D007929 1.2e-39 166.8 101 71.3
Psat2g182520 Pisum sativum HOM05D006321 ORTHO05D004512 1.2e-39 166.8 102 70.6
Psat4g027120 Pisum sativum HOM05D006321 ORTHO05D007929 1.2e-39 166.8 102 70.6
Sopen07g004840 Solanum pennellii HOM05D003168 ORTHO05D003590 1.2e-39 166.8 100 70.0
HanXRQChr03g0068421 Helianthus annuus HOM05D006321 ORTHO05D007929 1.5e-39 166.4 92 79.3
GSVIVG01010872001 Vitis vinifera HOM05D006321 ORTHO05D007929 1.5e-39 166.4 102 70.6
MSTRG.10445 Avicennia marina HOM05D006321 ORTHO05D007929 2.0e-39 166.0 102 71.6
ECA234G0872 Erigeron canadensis HOM05D006321 ORTHO05D007929 2.0e-39 166.0 101 72.3
Potri.006G076300 Populus trichocarpa HOM05D006321 ORTHO05D007929 2.6e-39 165.6 102 70.6
Medtr3g465100 Medicago truncatula HOM05D006321 ORTHO05D007929 3.4e-39 165.2 102 68.6
Lalb_Chr04g0263391 Lupinus albus HOM05D006321 ORTHO05D007929 4.5e-39 164.9 98 72.4
C09p49090 Brassica napus HOM05D006321 ORTHO05D007929 5.9e-39 164.5 108 68.5
BolC9t57758H Brassica oleracea HOM05D006321 ORTHO05D007929 5.9e-39 164.5 108 68.5
RcHm_v2.0_Chr4g0399821 Rosa chinensis HOM05D006321 ORTHO05D007929 5.9e-39 164.5 102 71.6
arahy.Tifrunner.gnm1.ann1.CI6UTV Arachis hypogaea HOM05D006321 ORTHO05D007929 7.7e-39 164.1 98 70.4
Ca_14974_v3 Cicer arietinum L. HOM05D006321 ORTHO05D007929 7.7e-39 164.1 100 70.0
MD13G1243200 Malus domestica HOM05D006321 ORTHO05D007929 1.0e-38 163.7 102 70.6
TPR.G32885 Trifolium pratense HOM05D006321 ORTHO05D007929 1.0e-38 163.7 102 67.6
Ah.12g059430 Amaranthus hybridus HOM05D006321 ORTHO05D007929 1.3e-38 163.3 100 70.0
FvH4_4g07380 Fragaria vesca HOM05D006321 ORTHO05D007929 1.3e-38 163.3 98 73.5
FAN07G2214 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.3e-38 163.3 98 73.5
FAN12G2844 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.3e-38 163.3 98 73.5
FAN22G1279 Fragaria x ananassa HOM05D006321 ORTHO05D007929 1.3e-38 163.3 98 73.5
Oeu030095.1 Olea europaea HOM05D006321 ORTHO05D007929 1.3e-38 163.3 102 69.6
Lj6g0010246 Lotus japonicus HOM05D006321 ORTHO05D007929 1.7e-38 162.9 102 68.6
HPP92_002000 Vanilla planifolia HOM05D006321 ORTHO05D007929 1.7e-38 162.9 101 71.3
arahy.Tifrunner.gnm1.ann1.N3I1N2 Arachis hypogaea HOM05D006321 ORTHO05D007929 3.8e-38 161.8 93 73.1
Aqoxy3G01064 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 5.0e-38 161.4 101 69.3
TWI60G1509 Tripterygium wilfordii HOM05D006321 ORTHO05D007929 1.1e-37 160.2 102 68.6
Os06g0482200 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.9e-37 159.5 102 67.6
PSO339G6079 Papaver somniferum HOM05D006321 ORTHO05D007929 7.2e-37 157.5 101 66.3
Os10g0162834 Oryza sativa ssp. japonica HOM05D006321 ORTHO05D007929 1.2e-36 156.8 102 66.7
PSO384G3851 Papaver somniferum HOM05D006321 ORTHO05D007929 6.1e-36 154.5 101 65.3
MD16G1249800 Malus domestica HOM05D006321 ORTHO05D007929 7.9e-36 154.1 89 75.3
Sabra18G0117000 Salix brachista HOM05D003168 ORTHO05D003525 1.0e-35 153.7 95 74.7
SGA_v2.0_scaffold21G09650 Striga asiatica HOM05D006321 ORTHO05D007929 1.0e-35 153.7 102 66.7
CANSAT11G0316 Cannabis sativa HOM05D006321 ORTHO05D007929 1.4e-35 153.3 100 65.0
Lj6A87G16 Lonicera japonica HOM05D006321 ORTHO05D007929 2.3e-35 152.5 81 80.2
PSO541G2755 Papaver somniferum HOM05D006321 ORTHO05D007929 3.0e-35 152.1 101 64.4
ATR1152G025 Amborella trichopoda HOM05D006321 ORTHO05D007929 8.8e-35 150.6 83 78.3
COL.COLO4_32845 Corchorus olitorius HOM05D006321 ORTHO05D007929 8.8e-35 150.6 85 81.2
Zm00001eb161640 Zea mays HOM05D006321 ORTHO05D007929 2.6e-34 149.1 93 71.0
Dinv41168 Davidia involucrata HOM05D000015 ORTHO05D003525 4.4e-34 148.3 86 75.6
Actinidia01283 Actinidia chinensis HOM05D006321 ORTHO05D007929 5.7e-34 147.9 88 73.9
Psat5g235880 Pisum sativum HOM05D006321 ORTHO05D007929 5.7e-34 147.9 83 75.9
SEGI_34333 Sequoiadendron giganteum HOM05D006321 ORTHO05D007929 2.2e-33 146.0 101 61.4
CDE06G2300 Ceratophyllum demersum HOM05D006321 ORTHO05D007929 1.5e-31 139.8 82 75.6
Migut.G01073 Erythranthe guttata HOM05D006321 ORTHO05D007929 2.0e-31 139.4 81 75.3
unitig_736.g22252 Utricularia gibba HOM05D006321 ORTHO05D007929 2.0e-31 139.4 84 73.8
Sabra06G0057200 Salix brachista HOM05D006321 ORTHO05D007929 1.9e-29 132.9 150 46.0
FAN17G2672 Fragaria x ananassa HOM05D006321 ORTHO05D007929 7.2e-29 131.0 81 74.1
Cpa.g.sc95.16 Carica papaya HOM05D006321 ORTHO05D007929 6.1e-28 127.9 102 55.9
Lj6A100T20 Lonicera japonica HOM05D006321 ORTHO05D007929 3.9e-27 125.2 73 75.3
Pp3c22_13020 Physcomitrium patens HOM05D006321 ORTHO05D007929 5.7e-26 121.3 94 56.4
Mapoly0003s0233 Marchantia polymorpha HOM05D006321 ORTHO05D007929 9.7e-26 120.6 89 56.2
TAR629G2308 Trochodendron aralioides HOM05D006321 ORTHO05D007929 9.7e-26 120.6 85 64.7
Mapoly0003s0169 Marchantia polymorpha HOM05D006321 ORTHO05D007929 2.4e-24 115.9 89 55.1
CBR_g19745 Chara braunii HOM05D006321 ORTHO05D007929 6.3e-17 91.3 77 58.4
Peaxi162Scf00324g00017 Petunia axillaris HOM05D006321 ORTHO05D007929 5.0e-14 81.6 46 69.6
Aqoxy108s003 Aquilegia oxysepala HOM05D006321 ORTHO05D007929 8.5e-14 80.9 78 50.0
BcaB05g22329 Brassica carinata HOM05D006321 ORTHO05D007929 1.5e-13 80.1 100 43.0


User provided reference genes

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