Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005774 Daucus carota HOM05D007468 ORTHO05D009051 4.7e-83 311.2 167 100.0
DCAR_002873 Daucus carota HOM05D007468 ORTHO05D009051 1.4e-37 160.2 168 60.7
Cc08_g11840 Coffea canephora HOM05D007468 ORTHO05D009051 1.7e-11 73.6 159 37.1
Nitab4.5_0004002g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 4.8e-11 72.0 161 39.8
Oeu008450.1 Olea europaea HOM05D007468 ORTHO05D009051 6.3e-11 71.6 153 36.6
Peaxi162Scf00001g00282 Petunia axillaris HOM05D007468 ORTHO05D009051 6.3e-11 71.6 158 40.5
DCAR_005775 Daucus carota HOM05D060632 ORTHO05D009051 1.1e-10 70.9 190 36.3
Oeu008452.1 Olea europaea HOM05D007468 ORTHO05D009051 5.3e-10 68.6 153 35.3
Nitab4.5_0000116g0050 Nicotiana tabacum HOM05D007468 ORTHO05D009051 1.6e-09 67.0 159 39.0
PGSC0003DMG400031830 Solanum tuberosum HOM05D007468 ORTHO05D009051 2.0e-09 66.6 152 38.2
CAN.G668.23 Capsicum annuum HOM05D007468 ORTHO05D009051 1.0e-08 64.3 151 37.1
Solyc09g075660.3 Solanum lycopersicum HOM05D007468 ORTHO05D009051 1.7e-08 63.5 152 36.2
RcHm_v2.0_Chr7g0241941 Rosa chinensis HOM05D007468 ORTHO05D009051 2.2e-08 63.2 150 38.0
Sopen09g030460 Solanum pennellii HOM05D007468 ORTHO05D009051 3.8e-08 62.4 152 36.2
TWI36G1516 Tripterygium wilfordii HOM05D007468 ORTHO05D009051 3.8e-08 62.4 159 36.5
Actinidia27604 Actinidia chinensis HOM05D007468 ORTHO05D009051 5.0e-08 62.0 160 37.5
FvH4_5g39630 Fragaria vesca HOM05D007468 ORTHO05D009051 1.5e-07 60.5 153 35.3
Rhsim01G0289100 Rhododendron simsii HOM05D007468 ORTHO05D009051 1.5e-07 60.5 150 35.3
Atru.chr5.1053 Acer truncatum HOM05D007468 ORTHO05D009051 1.9e-07 60.1 161 33.5
FAN08G3013 Fragaria x ananassa HOM05D007468 ORTHO05D009051 1.9e-07 60.1 155 36.8
DCAR_002872 Daucus carota HOM05D060632 ORTHO05D176298 2.5e-07 59.7 85 45.9
FAN18G4106 Fragaria x ananassa HOM05D007468 ORTHO05D009051 3.2e-07 59.3 155 36.8
QL12p028937 Quercus lobata HOM05D007468 ORTHO05D009051 4.2e-07 58.9 158 33.5
Rhsim13G0006300 Rhododendron simsii HOM05D007468 ORTHO05D009051 7.2e-07 58.2 174 35.6
ClCG10G011220 Citrullus lanatus HOM05D007468 ORTHO05D009051 9.4e-07 57.8 166 35.5
SHI19828 Sapria himalayana HOM05D007468 ORTHO05D009051 9.4e-07 57.8 157 33.1
Glyma.10G015100 Glycine max HOM05D007468 ORTHO05D009051 1.6e-06 57.0 168 33.3
PSO761G0006 Papaver somniferum HOM05D007468 ORTHO05D009051 1.6e-06 57.0 160 36.2
Psat6g163440 Pisum sativum HOM05D007468 ORTHO05D009051 2.1e-06 56.6 157 31.2
CsaV3_7G029790 Cucumis sativus L. HOM05D007468 ORTHO05D009051 3.6e-06 55.8 158 32.3
Duzib138G0571 Durio zibethinus HOM05D007468 ORTHO05D009051 8.0e-06 54.7 162 33.3
FAN04G2054 Fragaria x ananassa HOM05D007468 ORTHO05D009051 8.0e-06 54.7 157 33.8
Nitab4.5_0008750g0010 Nicotiana tabacum HOM05D007468 ORTHO05D009051 8.0e-06 54.7 163 34.4


User provided reference genes

Program Settings