Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005759 Daucus carota HOM05D000361 ORTHO05D004243 1.1e-229 799.7 421 100.0
Actinidia20995 Actinidia chinensis HOM05D000361 ORTHO05D004243 8.4e-137 491.1 449 60.4
Actinidia25847 Actinidia chinensis HOM05D000361 ORTHO05D004243 1.4e-136 490.3 449 60.1
Hma1.2p1_0486F.1_g163260 Hydrangea macrophylla HOM05D000361 ORTHO05D004243 1.4e-136 490.3 447 59.1
CSS0030911 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.9e-136 490.0 453 59.8
CSS0010179 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 2.1e-135 486.5 448 60.0
DCAR_012354 Daucus carota HOM05D000361 ORTHO05D004243 2.3e-134 483.0 455 58.7
Dinv10097 Davidia involucrata HOM05D000361 ORTHO05D004243 2.5e-133 479.6 448 60.3
Hund09630 Selenicereus undatus HOM05D000361 ORTHO05D004243 4.3e-133 478.8 436 60.8
Cc01_g21390 Coffea canephora HOM05D000361 ORTHO05D004243 5.6e-133 478.4 455 59.1
GSVIVG01028119001 Vitis vinifera HOM05D000361 ORTHO05D004243 3.7e-132 475.7 455 58.7
Rhsim01G0290600 Rhododendron simsii HOM05D000361 ORTHO05D004243 6.2e-132 474.9 444 59.2
Sc05g0000420 Simmondsia chinensis HOM05D000361 ORTHO05D004243 1.5e-130 470.3 455 58.7
EL10As5g23529 Beta vulgaris HOM05D000361 ORTHO05D004243 2.0e-130 469.9 445 59.3
vmacro15111 Vaccinium macrocarpon HOM05D000361 ORTHO05D004243 4.2e-128 462.2 444 58.6
AUR62024653 Chenopodium quinoa HOM05D000361 ORTHO05D004243 7.1e-128 461.5 455 57.6
Thecc.01G313200 Theobroma cacao HOM05D000361 ORTHO05D004243 3.5e-127 459.1 454 56.2
Peaxi162Scf00691g00222 Petunia axillaris HOM05D000361 ORTHO05D004243 4.6e-127 458.8 447 56.6
CSS0012467 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D004243 1.3e-126 457.2 447 57.5
AUR62011807 Chenopodium quinoa HOM05D000361 ORTHO05D004243 1.8e-126 456.8 455 57.4
Duzib138G1700 Durio zibethinus HOM05D000361 ORTHO05D004243 2.3e-126 456.4 454 55.7
Ah.10g031040 Amaranthus hybridus HOM05D000361 ORTHO05D004243 3.0e-126 456.1 450 57.1
Haze_05039 Corylus avellana HOM05D000361 ORTHO05D004243 3.0e-126 456.1 449 56.3
Sopen06g004290 Solanum pennellii HOM05D000361 ORTHO05D004243 3.0e-126 456.1 445 57.1
Solyc01g079490.2 Solanum lycopersicum HOM05D000361 ORTHO05D004243 6.7e-126 454.9 452 56.2
Sopen01g031260 Solanum pennellii HOM05D000361 ORTHO05D004243 8.7e-126 454.5 452 56.0
Migut.N00925 Erythranthe guttata HOM05D000361 ORTHO05D004243 1.5e-125 453.8 451 57.4
Peaxi162Scf00058g02630 Petunia axillaris HOM05D000361 ORTHO05D004243 4.3e-125 452.2 465 55.3
Solyc06g009650.3 Solanum lycopersicum HOM05D000361 ORTHO05D004243 7.4e-125 451.4 445 56.2
TAR633G1939 Trochodendron aralioides HOM05D000361 ORTHO05D004243 2.2e-124 449.9 456 56.6
Prupe.5G007800 Prunus persica HOM05D000361 ORTHO05D004243 3.7e-124 449.1 454 55.5
Nitab4.5_0006144g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 6.3e-124 448.4 451 55.0
CiPaw.07G117400 Carya illinoinensis HOM05D000361 ORTHO05D004243 1.1e-123 447.6 446 54.9
QL12p019966 Quercus lobata HOM05D000361 ORTHO05D004243 1.1e-123 447.6 448 56.0
ECA236G0422 Erigeron canadensis HOM05D000361 ORTHO05D005006 1.4e-123 447.2 449 56.1
MSTRG.21685 Avicennia marina HOM05D000361 ORTHO05D004243 2.4e-123 446.4 448 56.2
Ciclev10018936m.g Citrus clementina HOM05D000361 ORTHO05D004243 2.4e-123 446.4 454 55.3
Cfa005802 Carpinus fangiana HOM05D000361 ORTHO05D005006 1.3e-121 440.7 449 55.0
MELO3C023707.2 Cucumis melo HOM05D000361 ORTHO05D004243 2.9e-121 439.5 455 55.6
MD03G1295300 Malus domestica HOM05D000361 ORTHO05D004243 6.5e-121 438.3 455 55.4
ClCG07G000710 Citrullus lanatus HOM05D000361 ORTHO05D004243 8.5e-121 438.0 432 57.6
CAN.G1280.26 Capsicum annuum HOM05D000361 ORTHO05D004243 1.4e-120 437.2 441 56.5
Nitab4.5_0000363g0270 Nicotiana tabacum HOM05D000361 ORTHO05D004243 1.4e-120 437.2 477 52.2
CsaV3_7G025080 Cucumis sativus L. HOM05D000361 ORTHO05D004243 5.5e-120 435.3 455 55.6
RcHm_v2.0_Chr7g0241471 Rosa chinensis HOM05D000361 ORTHO05D004243 9.3e-120 434.5 454 53.5
Eucgr.H00929 Eucalyptus grandis HOM05D000361 ORTHO05D004243 2.7e-119 433.0 445 55.3
Ciclev10010795m.g Citrus clementina HOM05D000361 ORTHO05D004243 6.1e-119 431.8 454 53.5
Aqoxy3G02976 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 1.8e-118 430.3 451 53.9
FvH4_5g39210 Fragaria vesca HOM05D000361 ORTHO05D004243 2.3e-118 429.9 454 53.3
SGA_v2.0_scaffold36G14324 Striga asiatica HOM05D000361 ORTHO05D004243 2.3e-118 429.9 472 54.0
CANSAT25G2078 Cannabis sativa HOM05D000361 ORTHO05D004243 3.9e-118 429.1 454 53.7
FAN18G4464 Fragaria x ananassa HOM05D000361 ORTHO05D004243 3.9e-118 429.1 454 53.5
Dinv33114 Davidia involucrata HOM05D000361 ORTHO05D004243 1.1e-117 427.6 453 54.5
TWI36G0074 Tripterygium wilfordii HOM05D000361 ORTHO05D004243 1.1e-117 427.6 455 53.0
Gohir.A12G125100 Gossypium hirsutum HOM05D000361 ORTHO05D004243 1.5e-117 427.2 449 53.2
Gohir.D12G128800 Gossypium hirsutum HOM05D000361 ORTHO05D004243 1.5e-117 427.2 449 53.2
HanXRQChr15g0464131 Helianthus annuus HOM05D000361 ORTHO05D004243 1.9e-117 426.8 451 54.1
Gorai.008G139800 Gossypium raimondii HOM05D000361 ORTHO05D004243 2.5e-117 426.4 449 53.0
Gohir.A11G109900 Gossypium hirsutum HOM05D000361 ORTHO05D004243 2.8e-116 422.9 454 52.4
Sed0012026 Sechium edule HOM05D000361 ORTHO05D004243 2.8e-116 422.9 455 53.8
Gorai.007G122900 Gossypium raimondii HOM05D000361 ORTHO05D004243 3.7e-116 422.5 454 52.4
Manes.01G227700 Manihot esculenta HOM05D000361 ORTHO05D004243 4.8e-116 422.2 447 53.5
COL.COLO4_23233 Corchorus olitorius HOM05D000361 ORTHO05D004243 1.8e-115 420.2 454 52.4
SalBow2G3626 Salvia bowleyana HOM05D000361 ORTHO05D004243 3.1e-115 419.5 501 51.5
Oeu008471.2 Olea europaea HOM05D000361 ORTHO05D004243 9.1e-115 417.9 485 52.2
PGR119G2139 Punica granatum HOM05D000361 ORTHO05D004243 1.2e-114 417.5 454 52.9
Potri.002G196300 Populus trichocarpa HOM05D000361 ORTHO05D004243 1.5e-114 417.2 454 52.4
Aqoxy3G01218 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 1.0e-113 414.5 459 51.0
Nn4g25601 Nelumbo nucifera HOM05D000361 ORTHO05D004243 5.0e-113 412.1 446 53.4
Lsat_1_v5_gn_1_35460 Lactuca sativa HOM05D000361 ORTHO05D004243 1.1e-112 411.0 463 52.7
Potri.014G120900 Populus trichocarpa HOM05D000361 ORTHO05D004243 3.2e-112 409.5 454 51.3
Ca_10285_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 4.2e-112 409.1 449 52.3
arahy.Tifrunner.gnm1.ann1.N0EKR1 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.6e-111 407.1 449 51.7
Medtr1g087100 Medicago truncatula HOM05D000361 ORTHO05D004243 6.1e-111 405.2 446 52.0
Lj5g0013347 Lotus japonicus HOM05D000361 ORTHO05D004243 2.0e-109 400.2 448 52.0
Glyma.02G012800 Glycine max HOM05D000361 ORTHO05D004243 4.4e-109 399.1 451 49.9
Duzib133G0716 Durio zibethinus HOM05D000361 ORTHO05D004243 5.7e-109 398.7 449 51.2
TPR.G19758 Trifolium pratense HOM05D000361 ORTHO05D004243 1.7e-108 397.1 449 51.0
Phvul.007G214400 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 3.7e-108 396.0 449 50.3
arahy.Tifrunner.gnm1.ann1.66RZQ8 Arachis hypogaea HOM05D000361 ORTHO05D004243 4.8e-108 395.6 449 51.2
Psat6g161800 Pisum sativum HOM05D000361 ORTHO05D004243 1.1e-107 394.4 450 50.9
AL6G51220 Arabidopsis lyrata HOM05D000361 ORTHO05D004243 1.4e-107 394.0 447 49.7
Carub.0006s3520 Capsella rubella HOM05D000361 ORTHO05D004243 1.4e-107 394.0 442 50.5
PSO017G2448 Papaver somniferum HOM05D000361 ORTHO05D004243 1.4e-107 394.0 452 50.7
Sp6g01910 Schrenkiella parvula HOM05D000361 ORTHO05D004243 1.4e-107 394.0 447 49.7
THA.LOC104799236 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 1.4e-107 394.0 443 50.3
arahy.Tifrunner.gnm1.ann1.G7NAMC Arachis hypogaea HOM05D000361 ORTHO05D004243 2.4e-107 393.3 470 49.1
arahy.Tifrunner.gnm1.ann1.KULZ0F Arachis hypogaea HOM05D000361 ORTHO05D004243 3.1e-107 392.9 449 50.8
CDE11G0331 Ceratophyllum demersum HOM05D000361 ORTHO05D004243 5.3e-107 392.1 452 51.3
AT4G02030 Arabidopsis thaliana HOM05D000361 ORTHO05D004243 6.9e-107 391.7 447 49.4
Lalb_Chr06g0166851 Lupinus albus HOM05D000361 ORTHO05D004243 6.9e-107 391.7 449 50.8
VMungo0720G0598 Vigna mungo HOM05D000361 ORTHO05D004243 6.9e-107 391.7 449 50.1
FAN08G2818 Fragaria x ananassa HOM05D000361 ORTHO05D004243 1.5e-106 390.6 454 50.9
THA.LOC104801306 Tarenaya hassleriana HOM05D000361 ORTHO05D004243 2.0e-106 390.2 448 49.3
Glyma.10G013400 Glycine max HOM05D000361 ORTHO05D004243 2.6e-106 389.8 450 50.0
BcaC04g24028 Brassica carinata HOM05D000361 ORTHO05D004243 3.4e-106 389.4 447 49.7
BcaB01g02087 Brassica carinata HOM05D000361 ORTHO05D004243 5.9e-106 388.7 447 49.4
PSO063G6259 Papaver somniferum HOM05D000361 ORTHO05D004243 1.3e-105 387.5 451 49.2
C09p01600 Brassica napus HOM05D000361 ORTHO05D004243 1.7e-105 387.1 448 50.0
Thhalv10028443m.g Eutrema salsugineum HOM05D000361 ORTHO05D004243 2.2e-105 386.7 442 49.5
A09p01480 Brassica napus HOM05D000361 ORTHO05D004243 3.8e-105 386.0 448 49.8
ATR0796G177 Amborella trichopoda HOM05D000361 ORTHO05D004243 3.2e-104 382.9 452 48.9
CARHR249640 Cardamine hirsuta HOM05D000361 ORTHO05D004243 5.5e-104 382.1 447 49.2
BraA09t35809Z Brassica rapa HOM05D000361 ORTHO05D004243 4.4e-101 372.5 477 47.0
Phvul.001G212700 Phaseolus vulgaris HOM05D000361 ORTHO05D004243 9.7e-101 371.3 447 49.4
BolC9t53093H Brassica oleracea HOM05D000361 ORTHO05D004243 1.3e-100 370.9 481 46.8
Aa31LG5G1680 Aethionema arabicum HOM05D000361 ORTHO05D004243 1.7e-100 370.5 467 48.2
FAN04G1824 Fragaria x ananassa HOM05D000361 ORTHO05D004243 2.8e-100 369.8 445 49.2
Nitab4.5_0001301g0010 Nicotiana tabacum HOM05D000361 ORTHO05D004243 2.9e-97 359.8 451 48.8
TPR.G4118 Trifolium pratense HOM05D000361 ORTHO05D004243 5.0e-97 359.0 443 46.3
HPP92_004593 Vanilla planifolia HOM05D000361 ORTHO05D004243 4.2e-96 355.9 454 46.5
Psat3g020160 Pisum sativum HOM05D000361 ORTHO05D004243 9.4e-96 354.8 442 46.8
VMungo1383G3239 Vigna mungo HOM05D000361 ORTHO05D004243 3.6e-95 352.8 462 46.5
CAN.G777.12 Capsicum annuum HOM05D000361 ORTHO05D004243 1.8e-91 340.5 376 53.5
Manes.05G003200 Manihot esculenta HOM05D000361 ORTHO05D004243 7.0e-91 338.6 341 52.5
Sabra14G0089600 Salix brachista HOM05D000361 ORTHO05D005006 7.0e-91 338.6 560 41.1
Zm00001eb215280 Zea mays HOM05D000361 ORTHO05D004243 2.0e-90 337.0 444 45.3
Lj2A1205T44 Lonicera japonica HOM05D000361 ORTHO05D004243 2.2e-89 333.6 358 54.7
Lj1g0012423 Lotus japonicus HOM05D000361 ORTHO05D004243 6.5e-89 332.0 384 50.3
Os03g0737800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D004243 7.5e-85 318.5 397 46.3
Sabra02G0160700 Salix brachista HOM05D000361 ORTHO05D004243 4.1e-83 312.8 489 42.7
Ca_09209_v3 Cicer arietinum L. HOM05D000361 ORTHO05D004243 7.0e-83 312.0 428 43.7
Aqoxy328s001 Aquilegia oxysepala HOM05D000361 ORTHO05D004243 8.6e-81 305.1 380 47.1
unitig_736.g22937 Utricularia gibba HOM05D000361 ORTHO05D004243 2.0e-74 283.9 385 44.9
SEGI_20894 Sequoiadendron giganteum HOM05D000361 ORTHO05D004243 6.1e-71 272.3 368 46.2
Lalb_Chr15g0078161 Lupinus albus HOM05D000361 ORTHO05D004243 6.8e-70 268.9 284 52.1
Oeu049914.1 Olea europaea HOM05D000361 ORTHO05D004243 1.4e-62 244.6 481 39.3
SMO195G0031 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 8.3e-60 235.3 446 35.9
SMO116G0335 Selaginella moellendorffii HOM05D000361 ORTHO05D004243 7.0e-59 232.3 446 35.7
Pp3c12_23510 Physcomitrium patens HOM05D000361 ORTHO05D004243 4.6e-58 229.6 457 35.7
arahy.Tifrunner.gnm1.ann1.3FW809 Arachis hypogaea HOM05D000361 ORTHO05D004243 1.1e-56 224.9 235 54.9
Mapoly0167s0022 Marchantia polymorpha HOM05D000361 ORTHO05D004243 2.1e-55 220.7 473 33.8
Atru.chr5.1002 Acer truncatum HOM05D000361 ORTHO05D004243 8.1e-55 218.8 203 61.1
arahy.Tifrunner.gnm1.ann1.Z1FAFN Arachis hypogaea HOM05D000361 ORTHO05D004243 4.0e-54 216.5 264 50.0
ClCG10G006350 Citrullus lanatus HOM05D000361 ORTHO05D004243 2.4e-46 190.7 274 43.8
Nitab4.5_0011075g0020 Nicotiana tabacum HOM05D000361 ORTHO05D004243 4.9e-44 183.0 270 43.3
Pp3c3_36800 Physcomitrium patens HOM05D000361 ORTHO05D004243 8.4e-44 182.2 451 31.5
arahy.Tifrunner.gnm1.ann1.99VT9P Arachis hypogaea HOM05D000361 ORTHO05D004243 4.6e-42 176.4 210 50.0
CBR_g48220 Chara braunii HOM05D000361 ORTHO05D004243 1.9e-40 171.0 270 38.1
Cpa.g.sc18.42 Carica papaya HOM05D000361 ORTHO05D004243 7.3e-40 169.1 221 44.3
arahy.Tifrunner.gnm1.ann1.1JN5P4 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.2e-35 153.7 145 57.9
Oeu049910.1 Olea europaea HOM05D000361 ORTHO05D004243 4.6e-34 149.8 111 71.2
Atru.chr5.1003 Acer truncatum HOM05D000361 ORTHO05D004243 2.4e-27 127.5 135 50.4
AagrBONN_evm.TU.Sc2ySwM_228.3730 Anthoceros agrestis HOM05D000361 ORTHO05D004243 1.3e-25 121.7 302 27.8
Glyma.14G155300 Glycine max HOM05D000361 ORTHO05D004243 6.7e-25 119.4 88 63.6
PRCOL_00004542 Prasinoderma coloniale HOM05D000361 ORTHO05D004243 9.6e-24 115.5 423 25.5
Migut.H00631 Erythranthe guttata HOM05D000361 ORTHO05D004243 1.3e-23 115.2 91 68.1
Lalb_Chr15g0078151 Lupinus albus HOM05D000361 ORTHO05D004243 1.8e-22 111.3 135 47.4
arahy.Tifrunner.gnm1.ann1.3YE891 Arachis hypogaea HOM05D000361 ORTHO05D004243 4.5e-21 106.7 67 77.6
MD11G1314200 Malus domestica HOM05D000361 ORTHO05D004243 8.7e-17 92.4 94 54.3
Cre09.g404650 Chlamydomonas reinhardtii HOM05D000361 ORTHO05D004243 6.2e-15 86.3 287 27.2
Gorai.008G140000 Gossypium raimondii HOM05D000361 ORTHO05D004243 8.2e-15 85.9 86 53.5
MCO10G287 Micromonas commoda HOM05D000361 ORTHO05D004243 3.1e-14 84.0 238 29.8
SHI15042 Sapria himalayana HOM05D000361 ORTHO05D004243 4.0e-14 83.6 108 36.1
Oeu041216.1 Olea europaea HOM05D000361 ORTHO05D004243 1.4e-11 75.1 111 42.3
arahy.Tifrunner.gnm1.ann1.F7DSY0 Arachis hypogaea HOM05D000361 ORTHO05D004243 3.9e-09 67.0 90 44.4
Hma1.2p1_0023F.1_g015020 Hydrangea macrophylla HOM05D002686 ORTHO05D004243 6.7e-09 66.2 59 52.5
CAN.G777.11 Capsicum annuum HOM05D000361 ORTHO05D004243 1.5e-08 65.1 81 42.0
ClCG10G006380 Citrullus lanatus HOM05D000361 ORTHO05D004243 1.5e-08 65.1 86 46.5
Actinidia04687 Actinidia chinensis HOM05D000361 ORTHO05D004243 9.7e-08 62.4 89 37.1
Actinidia04728 Actinidia chinensis HOM05D000361 ORTHO05D004243 9.7e-08 62.4 89 37.1
Actinidia27762 Actinidia chinensis HOM05D000361 ORTHO05D004243 9.7e-08 62.4 89 37.1
arahy.Tifrunner.gnm1.ann1.WB4NLC Arachis hypogaea HOM05D001795 ORTHO05D001741 3.1e-06 57.4 36 77.8
arahy.Tifrunner.gnm1.ann1.FUJ1Q4 Arachis hypogaea HOM05D001795 ORTHO05D006205 4.1e-06 57.0 35 80.0
Lj2A1205T45 Lonicera japonica HOM05D000361 ORTHO05D004243 5.3e-06 56.6 33 84.8
arahy.Tifrunner.gnm1.ann1.DXQ6L2 Arachis hypogaea HOM05D001795 ORTHO05D001741 6.9e-06 56.2 36 75.0
CAN.G1393.2 Capsicum annuum HOM05D005033 ORTHO05D005387 6.9e-06 56.2 31 87.1


User provided reference genes

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