Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005756 Daucus carota HOM05D005129 ORTHO05D005585 3.7e-209 731.9 552 100.0
Rhsim06G0213800 Rhododendron simsii HOM05D005129 ORTHO05D005585 3.1e-22 110.9 184 43.5
Dinv27170 Davidia involucrata HOM05D005129 ORTHO05D005585 9.3e-19 99.4 149 40.9
Cc09_g07500 Coffea canephora HOM05D005129 ORTHO05D005585 4.6e-18 97.1 218 35.3
ClCG03G008270 Citrullus lanatus HOM05D005129 ORTHO05D005585 5.7e-16 90.1 231 29.9
Sed0027997 Sechium edule HOM05D005129 ORTHO05D005585 2.2e-15 88.2 228 30.7
MELO3C002837.2 Cucumis melo HOM05D005129 ORTHO05D005585 6.3e-15 86.7 231 28.1
DCAR_003834 Daucus carota HOM05D005129 ORTHO05D005585 8.2e-15 86.3 77 61.0
CsaV3_1G037120 Cucumis sativus L. HOM05D005129 ORTHO05D005585 4.1e-14 84.0 231 29.0
Gohir.D05G113400 Gossypium hirsutum HOM05D005129 ORTHO05D005585 4.1e-14 84.0 226 31.0
MD10G1247500 Malus domestica HOM05D005129 ORTHO05D005585 9.1e-14 82.8 208 32.7
Sabra11G0141700 Salix brachista HOM05D005129 ORTHO05D005585 1.5e-13 82.0 186 31.7
Gorai.009G117400 Gossypium raimondii HOM05D005129 ORTHO05D005585 2.0e-13 81.6 226 30.5
Gohir.A10G007300 Gossypium hirsutum HOM05D005129 ORTHO05D005585 7.7e-13 79.7 219 32.4
Gohir.A05G112850 Gossypium hirsutum HOM05D005129 ORTHO05D005585 1.3e-12 79.0 226 29.6
PGR083G2529 Punica granatum HOM05D005129 ORTHO05D005585 2.2e-12 78.2 186 33.3
Ciclev10014031m.g Citrus clementina HOM05D005129 ORTHO05D005585 3.8e-12 77.4 198 31.8
GSVIVG01035592001 Vitis vinifera HOM05D005129 ORTHO05D005585 1.1e-11 75.9 195 31.8
Rhsim03G0093400 Rhododendron simsii HOM05D005129 ORTHO05D005585 1.4e-11 75.5 183 35.0
Haze_05902 Corylus avellana HOM05D005129 ORTHO05D005585 1.9e-11 75.1 470 34.9
vmacro03361 Vaccinium macrocarpon HOM05D005129 ORTHO05D005585 1.9e-11 75.1 422 41.5
CSS0016153 Camellia sinensis var. sinensis HOM05D005129 ORTHO05D005585 2.5e-11 74.7 227 30.0
Gohir.D10G007200 Gossypium hirsutum HOM05D005129 ORTHO05D005585 2.5e-11 74.7 211 29.9
Gorai.011G007900 Gossypium raimondii HOM05D005129 ORTHO05D005585 2.5e-11 74.7 211 29.9
TAR633G2434 Trochodendron aralioides HOM05D005129 ORTHO05D005585 1.6e-10 72.0 169 36.7
AUR62028142 Chenopodium quinoa HOM05D005129 ORTHO05D005585 3.6e-10 70.9 205 28.8
Peaxi162Scf01909g00118 Petunia axillaris HOM05D005129 ORTHO05D005585 3.6e-10 70.9 219 28.8
Lj1C1160T1 Lonicera japonica HOM05D005129 ORTHO05D005585 6.1e-10 70.1 89 47.2
Cfa000799 Carpinus fangiana HOM05D005129 ORTHO05D005585 7.9e-10 69.7 227 30.4
AUR62005921 Chenopodium quinoa HOM05D005129 ORTHO05D005585 7.9e-10 69.7 204 28.9
TAR626G1389 Trochodendron aralioides HOM05D005129 ORTHO05D005585 7.9e-10 69.7 68 54.4
FAN11G1468 Fragaria x ananassa HOM05D005129 ORTHO05D005585 1.4e-09 68.9 163 34.4
Thecc.06G015200 Theobroma cacao HOM05D005129 ORTHO05D005585 1.4e-09 68.9 96 43.8
Manes.06G058900 Manihot esculenta HOM05D005129 ORTHO05D005585 2.0e-08 65.1 432 29.6
Migut.M00948 Erythranthe guttata HOM05D005129 ORTHO05D005585 4.4e-08 63.9 167 32.9
QL05p063822 Quercus lobata HOM05D005129 ORTHO05D005585 9.7e-08 62.8 226 29.2
SGA_v2.0_scaffold333G49012 Striga asiatica HOM05D005129 ORTHO05D005585 9.7e-08 62.8 164 31.7
FvH4_3g10781 Fragaria vesca HOM05D005129 ORTHO05D005585 2.8e-07 61.2 68 48.5
Cpa.g.sc166.48 Carica papaya HOM05D005129 ORTHO05D005585 6.3e-07 60.1 69 47.8
EL10Ac3g05106 Beta vulgaris HOM05D005129 ORTHO05D005585 8.2e-07 59.7 152 30.3
Aqoxy1G02020_Aqoxy1G02021 Aquilegia oxysepala HOM05D005129 ORTHO05D005585 1.8e-06 58.5 80 41.2
Nitab4.5_0000076g0130 Nicotiana tabacum HOM05D005129 ORTHO05D005585 1.8e-06 58.5 67 46.3
CANSAT35G1118 Cannabis sativa HOM05D005129 ORTHO05D005585 2.4e-06 58.2 63 49.2
SalBow8G1057 Salvia bowleyana HOM05D005129 ORTHO05D005585 2.4e-06 58.2 95 37.9
Ah.13g071200 Amaranthus hybridus HOM05D005129 ORTHO05D005585 4.1e-06 57.4 154 29.9
Dinv27169 Davidia involucrata HOM05D005129 ORTHO05D005585 4.1e-06 57.4 104 41.3
MBI18_g10016_MAGBIO Magnolia biondii HOM05D005129 ORTHO05D005585 4.1e-06 57.4 80 41.2
MD05G1268800 Malus domestica HOM05D005129 ORTHO05D005585 6.9e-06 56.6 71 45.1


User provided reference genes

Program Settings