Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 2.0e-175 619.0 319 100.0
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 3.0e-118 429.1 343 64.7
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 8.7e-118 427.6 343 64.1
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 4.8e-116 421.8 339 64.0
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 2.4e-115 419.5 336 64.6
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 4.4e-114 415.2 336 64.0
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 2.2e-113 412.9 339 63.1
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.0e-111 404.8 325 64.6
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 1.7e-110 403.3 339 61.9
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.9e-110 402.1 325 64.3
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 3.3e-109 399.1 330 63.3
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 5.6e-109 398.3 327 62.7
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 1.3e-108 397.1 340 61.8
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-108 396.4 325 63.4
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 2.8e-108 396.0 334 62.3
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 4.8e-108 395.2 325 63.1
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 6.2e-108 394.8 330 63.3
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.4e-107 393.7 342 60.8
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 1.8e-107 393.3 336 62.8
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 2.4e-107 392.9 336 62.5
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 5.3e-107 391.7 323 62.8
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 1.2e-106 390.6 338 63.0
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 1.5e-106 390.2 321 62.9
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 5.8e-106 388.3 336 61.3
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 9.9e-106 387.5 336 61.9
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 8.4e-105 384.4 329 61.4
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 8.4e-105 384.4 331 60.4
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 1.1e-104 384.0 327 60.9
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 2.4e-104 382.9 330 60.3
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 4.2e-104 382.1 338 59.5
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 7.1e-104 381.3 344 60.8
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 7.1e-104 381.3 326 61.3
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 2.1e-103 379.8 319 60.2
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 4.6e-103 378.6 330 59.7
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 6.0e-103 378.3 331 60.7
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 7.9e-103 377.9 315 62.9
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 7.9e-103 377.9 330 60.3
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 2.3e-102 376.3 355 57.5
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 8.7e-102 374.4 334 57.8
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 7.4e-101 371.3 333 59.2
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 1.6e-100 370.2 336 58.9
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 2.8e-100 369.4 337 58.2
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 4.8e-100 368.6 337 57.0
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 6.2e-100 368.2 337 59.1
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 4.0e-99 365.5 336 57.7
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 9.0e-99 364.4 338 57.1
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 3.4e-98 362.5 328 57.3
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.3e-97 360.5 295 61.7
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.3e-97 360.5 292 62.3
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.7e-97 360.1 289 62.6
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 4.9e-97 358.6 337 57.9
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 8.4e-97 357.8 320 58.8
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 8.4e-97 357.8 295 61.0
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.4e-97 357.8 325 58.8
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 2.5e-96 356.3 330 58.8
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.7e-95 352.8 324 57.7
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 2.3e-94 349.7 291 63.6
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 1.9e-93 346.7 382 50.8
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 4.3e-93 345.5 313 59.1
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 4.3e-93 345.5 335 56.4
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 4.8e-92 342.0 332 55.4
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 1.1e-91 340.9 360 55.6
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.8e-91 340.1 333 55.9
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 3.1e-91 339.3 350 55.1
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 9.0e-91 337.8 347 54.5
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 9.0e-91 337.8 280 62.1
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 2.6e-90 336.3 323 56.3
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 5.8e-90 335.1 320 55.9
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 1.0e-86 324.3 299 57.5
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 1.1e-85 320.9 270 59.6
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 2.5e-85 319.7 344 52.0
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 4.3e-85 318.9 280 61.8
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 9.7e-85 317.8 324 53.4
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.0e-82 310.1 323 54.2
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 1.3e-81 307.4 323 53.3
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 8.8e-78 294.7 299 53.8
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 5.7e-77 292.0 288 55.2
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 4.1e-75 285.8 222 63.5
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 4.5e-74 282.3 320 50.3
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 6.5e-73 278.5 222 63.1
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.5e-72 275.4 269 56.5
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 7.9e-71 271.6 252 56.3
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 1.1e-69 267.7 227 60.4
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 5.3e-67 258.8 320 49.7
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.9e-66 255.4 310 49.0
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.0e-65 252.3 222 59.9
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.9e-64 250.4 338 45.3
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.1e-63 246.9 325 47.4
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.1e-63 245.4 325 48.6
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.6e-61 240.0 199 60.8
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.7e-61 238.0 325 46.8
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 1.5e-56 224.2 188 63.3
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.0e-54 216.5 187 60.4
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 1.2e-53 214.5 281 45.2
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 2.6e-53 213.4 379 36.1
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 1.2e-50 204.5 182 59.3
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 5.5e-48 195.7 271 41.3
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 2.3e-46 190.3 184 54.9
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 1.2e-45 188.0 271 39.1
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 2.0e-45 187.2 128 71.1
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 3.4e-45 186.4 166 59.6
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 1.2e-31 141.4 295 33.6
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 3.5e-26 123.2 137 50.4
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 1.2e-21 108.2 242 32.2
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 1.7e-17 94.4 100 51.0
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 3.3e-16 90.1 70 62.9
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.4e-14 84.7 88 53.4
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 3.1e-14 83.6 95 49.5
SEGI_36165 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 4.7e-07 59.7 39 61.5


User provided reference genes

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